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The map label for this gene is 66048196

Identifier: 66048196

GI number: 66048196

Start: 5896106

End: 5897137

Strand: Direct

Name: 66048196

Synonym: Psyr_4972

Alternate gene names: NA

Gene position: 5896106-5897137 (Clockwise)

Preceding gene: 66048195

Following gene: 66048197

Centisome position: 96.76

GC content: 47.77

Gene sequence:

>1032_bases
ATGTTCACAAGGCTGGTTTTTCTGGCAATTCTCACCGCAAGCCTCTGTGCTTGTGAGAAGAAAGGTCATGACAGCGTCAC
TGATGAAGACATGGCTAAAGCCATGGAGAGGCTTTCGTTTGTCTGCACTCACGAAGCAGACCGTTTGCCTGCGATAAGCG
ATGATGCTCAGGTGCTGTATCGCTATGCACTATTTCTGGAATCGAAAAAAGGCGCCAAAGACTATCAGCAAATAGGCAGA
TACTACCGTTTGGCTTATGCAGCAGGTAACTATAAAGCGGCGACCAACCTGCACGACCTGATAGCTCAAGGCGTTGTTGA
TAGTAGCAATCGCAGTAAAGAGGTGATTGACATCGTAAAGAATCTGACCGCGCAAGGCATTCCGGGCGGTTATTACGATA
TGGGACATTATCTAGAGATAGGCTATGGAGTAAAGAAAGACATACCTAGCTCTCGCGCATATCTACGGAACGCAGCTGAC
TTGGGTAATCCGGACGCGCAATATTATATAGCCCAATTGCTAGGTGAGATCCCCAACACTGCAGACATAATGCAGTCAAT
GTATAAATGCGCAATGGAGCAAGGCCATTCACAGGCTGCAAGAAAATATTCAAGCTATGCCTCGGCAATACACTCTTACA
AAGATGCCGTAGCCGGCTACCAACTATCAACTAAAAGTGGTGATGATATTAGCGCCCATCGTCTGGCACGCGGCTTTGAA
GATAGAAAACCTTCTGACAGACTTTATTATTTAGCTTTAGAAAAAGATGAAGAGCGTGCCGCAAGATACGATAAAATCAG
CGACTTCTTATTACATCACGAACACTTGGGCGCCAAGATCCCAGATCTGGACGATATCGTTCCACTTCCTCCAGCACCGT
TACCCGAGTGGGACGGCACGTTCAAATGGAAGCGTGATCGTGATTCCGCCGCGCCACCTTCGCCCCCATCGGAAGAACTG
ATTCAACGCATTGCGGCTGAAAAGAACCTCGACCCTGCTACAGGCACGCCTTTGGCAGCCGTTAAAAAATAA

Upstream 100 bases:

>100_bases
AAAAAGACATGCGTTGAATCATACCCGACACATGCGTAGAGGAAGGGACTCCAATTCCGGGAAGCTTTTCTCACAAATAG
GCACATACAAGGGAATGGAA

Downstream 100 bases:

>100_bases
ACGATCTCTACTTGCACGACAGCGCGATATCCAAAATCTCGCGCGCGCTCTTAAGGAAAAGAAATGCTTGGTCCCCGTAG
GAGTATTTATGATCGCCTGT

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: Lipoprotein; Sel1 Domain Protein Repeat-Containing Protein; Sel1 Repeat-Containing Protein; TPR Repeat-Containing Protein; Sel1-Like Lipoprotein; Sel1-Like Repeat

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MFTRLVFLAILTASLCACEKKGHDSVTDEDMAKAMERLSFVCTHEADRLPAISDDAQVLYRYALFLESKKGAKDYQQIGR
YYRLAYAAGNYKAATNLHDLIAQGVVDSSNRSKEVIDIVKNLTAQGIPGGYYDMGHYLEIGYGVKKDIPSSRAYLRNAAD
LGNPDAQYYIAQLLGEIPNTADIMQSMYKCAMEQGHSQAARKYSSYASAIHSYKDAVAGYQLSTKSGDDISAHRLARGFE
DRKPSDRLYYLALEKDEERAARYDKISDFLLHHEHLGAKIPDLDDIVPLPPAPLPEWDGTFKWKRDRDSAAPPSPPSEEL
IQRIAAEKNLDPATGTPLAAVKK

Sequences:

>Translated_343_residues
MFTRLVFLAILTASLCACEKKGHDSVTDEDMAKAMERLSFVCTHEADRLPAISDDAQVLYRYALFLESKKGAKDYQQIGR
YYRLAYAAGNYKAATNLHDLIAQGVVDSSNRSKEVIDIVKNLTAQGIPGGYYDMGHYLEIGYGVKKDIPSSRAYLRNAAD
LGNPDAQYYIAQLLGEIPNTADIMQSMYKCAMEQGHSQAARKYSSYASAIHSYKDAVAGYQLSTKSGDDISAHRLARGFE
DRKPSDRLYYLALEKDEERAARYDKISDFLLHHEHLGAKIPDLDDIVPLPPAPLPEWDGTFKWKRDRDSAAPPSPPSEEL
IQRIAAEKNLDPATGTPLAAVKK
>Mature_343_residues
MFTRLVFLAILTASLCACEKKGHDSVTDEDMAKAMERLSFVCTHEADRLPAISDDAQVLYRYALFLESKKGAKDYQQIGR
YYRLAYAAGNYKAATNLHDLIAQGVVDSSNRSKEVIDIVKNLTAQGIPGGYYDMGHYLEIGYGVKKDIPSSRAYLRNAAD
LGNPDAQYYIAQLLGEIPNTADIMQSMYKCAMEQGHSQAARKYSSYASAIHSYKDAVAGYQLSTKSGDDISAHRLARGFE
DRKPSDRLYYLALEKDEERAARYDKISDFLLHHEHLGAKIPDLDDIVPLPPAPLPEWDGTFKWKRDRDSAAPPSPPSEEL
IQRIAAEKNLDPATGTPLAAVKK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38163; Mature: 38163

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTRLVFLAILTASLCACEKKGHDSVTDEDMAKAMERLSFVCTHEADRLPAISDDAQVLY
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RYALFLESKKGAKDYQQIGRYYRLAYAAGNYKAATNLHDLIAQGVVDSSNRSKEVIDIVK
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
NLTAQGIPGGYYDMGHYLEIGYGVKKDIPSSRAYLRNAADLGNPDAQYYIAQLLGEIPNT
HHHHCCCCCCHHCCCCCEEECCCCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCH
ADIMQSMYKCAMEQGHSQAARKYSSYASAIHSYKDAVAGYQLSTKSGDDISAHRLARGFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHC
DRKPSDRLYYLALEKDEERAARYDKISDFLLHHEHLGAKIPDLDDIVPLPPAPLPEWDGT
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
FKWKRDRDSAAPPSPPSEELIQRIAAEKNLDPATGTPLAAVKK
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MFTRLVFLAILTASLCACEKKGHDSVTDEDMAKAMERLSFVCTHEADRLPAISDDAQVLY
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RYALFLESKKGAKDYQQIGRYYRLAYAAGNYKAATNLHDLIAQGVVDSSNRSKEVIDIVK
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
NLTAQGIPGGYYDMGHYLEIGYGVKKDIPSSRAYLRNAADLGNPDAQYYIAQLLGEIPNT
HHHHCCCCCCHHCCCCCEEECCCCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCH
ADIMQSMYKCAMEQGHSQAARKYSSYASAIHSYKDAVAGYQLSTKSGDDISAHRLARGFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHC
DRKPSDRLYYLALEKDEERAARYDKISDFLLHHEHLGAKIPDLDDIVPLPPAPLPEWDGT
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
FKWKRDRDSAAPPSPPSEELIQRIAAEKNLDPATGTPLAAVKK
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA