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The map label for this gene is 66048183

Identifier: 66048183

GI number: 66048183

Start: 5879369

End: 5880124

Strand: Direct

Name: 66048183

Synonym: Psyr_4959

Alternate gene names: NA

Gene position: 5879369-5880124 (Clockwise)

Preceding gene: 66048182

Following gene: 66048184

Centisome position: 96.48

GC content: 57.94

Gene sequence:

>756_bases
ATGAATAAAAGACTTCAAGGCAATTGTTCCTCGAAGCCAGCCTTGGCAAGGTGCCTGGCTGTTCTGGCAATGATGATGGC
TCTGTCCGCCTGCGGCGTGACAGACCGTGTCGCCAAGCGCATGGATGACACCTGGGCTGGCGACATGATGTTCGGTGACA
ATGAAAAGGTCATCCTGACGACTGACGGCGGCAACCAGCTCAACCCCGACGAGTACGGCAAACCGCTCTCGGTGGTGGTG
CGCGTTTATCAACTGTCCTCTCTGGAGCGCTTCGAGTCGATCAACGCCGACACTCTCTGGGAGGATCCGCAAAAGGCTCT
GGGCAACACGCTGGTCGAGAGCCGGGAGCTGATTCTGTTGCCTGGCATGGGCCAGACCGATCAGTGGCCGCTGAACCCGA
ATGCCTCGTATGTGGGCATCGCGGCGTTCTTCCGCACCGACGTCGACAGCCGCTGGAAGGTCGCGTTCGACGCCAACACG
CTGCGCAAGGACGGTATCTGGTTCTCGTCCGACGGCGTGCGTGTGCTGGTGGATAACAACTACATCCTCGCGGTGCGTGG
TGTGGACGTGCTGAACAAACTCAAGACTGAAGAGCAGTTCAACAAATCCAATTCGATTCCCGAACAACCCGCCAGTAAAA
GTATGACCGAGCGCGCGCAGGACGCAGCTGTCCAGCAGGTTCAGGACTCGGCCGGCAGTGCTGCCAAAAAGGCAGCTGAC
TCACAATTCAATTCTCTGTTGGAAGGCGCCAAATGA

Upstream 100 bases:

>100_bases
GCGCAGGACAAGCCGATTCAGAGCCTGACCATCGACCTGGGCAGCGATGGCGACTTCGCTTACACCCTGACCTGATCGAT
CACCCCATAGGTAAGACGTA

Downstream 100 bases:

>100_bases
GTAAACAAAGCCGCGTGATGTGGTCGGAAGGCATGTTCCTTTTGCCGCAACATTTCCAATATCAGGATGAGTTTCATCAA
CATCAGCTTGCTGAGTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Lipoprotein/VasD

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNKRLQGNCSSKPALARCLAVLAMMMALSACGVTDRVAKRMDDTWAGDMMFGDNEKVILTTDGGNQLNPDEYGKPLSVVV
RVYQLSSLERFESINADTLWEDPQKALGNTLVESRELILLPGMGQTDQWPLNPNASYVGIAAFFRTDVDSRWKVAFDANT
LRKDGIWFSSDGVRVLVDNNYILAVRGVDVLNKLKTEEQFNKSNSIPEQPASKSMTERAQDAAVQQVQDSAGSAAKKAAD
SQFNSLLEGAK

Sequences:

>Translated_251_residues
MNKRLQGNCSSKPALARCLAVLAMMMALSACGVTDRVAKRMDDTWAGDMMFGDNEKVILTTDGGNQLNPDEYGKPLSVVV
RVYQLSSLERFESINADTLWEDPQKALGNTLVESRELILLPGMGQTDQWPLNPNASYVGIAAFFRTDVDSRWKVAFDANT
LRKDGIWFSSDGVRVLVDNNYILAVRGVDVLNKLKTEEQFNKSNSIPEQPASKSMTERAQDAAVQQVQDSAGSAAKKAAD
SQFNSLLEGAK
>Mature_251_residues
MNKRLQGNCSSKPALARCLAVLAMMMALSACGVTDRVAKRMDDTWAGDMMFGDNEKVILTTDGGNQLNPDEYGKPLSVVV
RVYQLSSLERFESINADTLWEDPQKALGNTLVESRELILLPGMGQTDQWPLNPNASYVGIAAFFRTDVDSRWKVAFDANT
LRKDGIWFSSDGVRVLVDNNYILAVRGVDVLNKLKTEEQFNKSNSIPEQPASKSMTERAQDAAVQQVQDSAGSAAKKAAD
SQFNSLLEGAK

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27544; Mature: 27544

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRLQGNCSSKPALARCLAVLAMMMALSACGVTDRVAKRMDDTWAGDMMFGDNEKVILT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEECCCCEEEEE
TDGGNQLNPDEYGKPLSVVVRVYQLSSLERFESINADTLWEDPQKALGNTLVESRELILL
ECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEE
PGMGQTDQWPLNPNASYVGIAAFFRTDVDSRWKVAFDANTLRKDGIWFSSDGVRVLVDNN
CCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCEEEEECCCCHHHCCEEECCCCEEEEEECC
YILAVRGVDVLNKLKTEEQFNKSNSIPEQPASKSMTERAQDAAVQQVQDSAGSAAKKAAD
EEEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQFNSLLEGAK
HHHHHHHCCCC
>Mature Secondary Structure
MNKRLQGNCSSKPALARCLAVLAMMMALSACGVTDRVAKRMDDTWAGDMMFGDNEKVILT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEECCCCEEEEE
TDGGNQLNPDEYGKPLSVVVRVYQLSSLERFESINADTLWEDPQKALGNTLVESRELILL
ECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEE
PGMGQTDQWPLNPNASYVGIAAFFRTDVDSRWKVAFDANTLRKDGIWFSSDGVRVLVDNN
CCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCEEEEECCCCHHHCCEEECCCCEEEEEECC
YILAVRGVDVLNKLKTEEQFNKSNSIPEQPASKSMTERAQDAAVQQVQDSAGSAAKKAAD
EEEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQFNSLLEGAK
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA