| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is gpmI [H]
Identifier: 66048109
GI number: 66048109
Start: 5794250
End: 5795839
Strand: Direct
Name: gpmI [H]
Synonym: Psyr_4885
Alternate gene names: 66048109
Gene position: 5794250-5795839 (Clockwise)
Preceding gene: 66048105
Following gene: 66048110
Centisome position: 95.09
GC content: 60.19
Gene sequence:
>1590_bases ATGCCGTTCCCTTGTACTTTGTTCATCTCTTTATCCAATCAGCATCGAGTGGGTTCTATGACTGCCACGCCAAAACCTCT GGTTCTTATCATCCTGGATGGCTTCGGACACAGCGAAAGCCACAAGGGCAATGCCATTCTGGCCGCGAAGATGCCGGTCA TGGATCGTCTCTACCAAACCATGCCCAATGGCCTGATTTCCGGGTCGGGCATGGACGTCGGTCTGCCGGACGGGCAGATG GGCAATTCCGAGGTCGGGCACATGAACCTGGGTGCCGGCCGCGTGGTGTATCAGGACTTCACTCGGGTGACCAAAGCGAT TCGCGATGGCGAGTTCTTCGAAAACCCGACCATCTGCGCCGCTGTGGATAAAGCTGTCAGCGCCGGCAAGGCCGTGCACA TCATGGGCCTGCTGTCCGATGGCGGCGTACACAGCCACCAGGACCATCTGGTTGCGATGGCAGAACTGGCGGTCAAACGC GGTGCAGAAAAAATCTACCTGCACGCCTTCCTTGATGGCCGCGACACACCACCGCGCAGCGCGAAGAAATCCCTCGAGCT GATGGACGCAACCTTTGCCCGTCTGGGCAAGGGTCGCACTGCCACGATCGTCGGCCGCTACTTCGCCATGGACCGTGACA ATCGCTGGGACCGGGTTTCCTCTGCCTATAACCTGATCGTCGACAGCACCGCCGATTTCCACGCCGACAGCGCCGTTGCC GGGCTCGAAGCCGCCTACGCACGCGACGAGAACGACGAGTTCGTCAAGGCCACCCGCATTGGCGAAGCCGCCCGCGTTGA AGATGGCGACGCGGTGGTGTTCATGAACTTCCGTGCCGACCGAGCTCGTGAACTGACTCGTGTGTTCGTCGAAGACGATT TCAAGGACTTCGAGCGCGCCCGTCAGCCGAAGGTCAACTACGTGATGCTGACCCAGTACGCGGCGAGCATTCCTGCGCCG TCCGCTTTTGCTGCGGGCAGCCTGAAAAACGTGCTGGGCGAGTACCTGGCGGACAACGGCAAGACCCAGCTGCGCATCGC TGAAACCGAAAAATACGCCCACGTCACCTTCTTCTTCTCCGGCGGCCGAGAAGAACCGTTCCCGGGTGAAGAGCGCATTC TGATCCCGTCGCCGAAAGTCGCCACTTACGACCTGCAGCCGGAGATGAGCGCACCGGAAGTGACCGACAAAATTGTCGAT GCCATCGAACATCAGCGTTATGACGTGATCGTCGTCAACTACGCCAACGGCGACATGGTTGGCCACAGCGGGATCATGGA AGCCGCGATCAAGGCTGTGGAATGCCTGGACGTGTGTGTCGGGCGCATCGCCGAGGCGCTGGAGAAAGTCGGTGGTGAGG CGCTGATTACCGCTGACCACGGCAACGTCGAGCAGATGACCGACGACTCCACCGGACAGGCGCACACTGCGCATACCTCC GAGCCGGTGCCGTTCGTTTATGTCGGCAAACGTCAGCTGAAAGTTCGCCAAGGCGGCGTTCTGGCCGATGTCGCGCCGAC CATGCTGCACCTGCTGGGCATGGAGAAACCGCAAGAGATGACTGGTCACTCGATCCTCGTGGCCGAGTAA
Upstream 100 bases:
>100_bases TCAGTAGGTTCCAGGGCGTTAAAATGTCGGCCAGTATACACAGCAGCCAAGGTCGGCCAAAGTCCGTACGACAGTGACGC CGTTTGAACTTGTCCTTAAA
Downstream 100 bases:
>100_bases TCCGGAAAAACCGGCCTTTAGCCATCAGGCAAGGCCGGTTTTTTATGTTTCAGGCCTCAAAGCAGTGGCTGCGAGGCGTT TTTTTTGCAGCGCATGGCGG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MPFPCTLFISLSNQHRVGSMTATPKPLVLIILDGFGHSESHKGNAILAAKMPVMDRLYQTMPNGLISGSGMDVGLPDGQM GNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICAAVDKAVSAGKAVHIMGLLSDGGVHSHQDHLVAMAELAVKR GAEKIYLHAFLDGRDTPPRSAKKSLELMDATFARLGKGRTATIVGRYFAMDRDNRWDRVSSAYNLIVDSTADFHADSAVA GLEAAYARDENDEFVKATRIGEAARVEDGDAVVFMNFRADRARELTRVFVEDDFKDFERARQPKVNYVMLTQYAASIPAP SAFAAGSLKNVLGEYLADNGKTQLRIAETEKYAHVTFFFSGGREEPFPGEERILIPSPKVATYDLQPEMSAPEVTDKIVD AIEHQRYDVIVVNYANGDMVGHSGIMEAAIKAVECLDVCVGRIAEALEKVGGEALITADHGNVEQMTDDSTGQAHTAHTS EPVPFVYVGKRQLKVRQGGVLADVAPTMLHLLGMEKPQEMTGHSILVAE
Sequences:
>Translated_529_residues MPFPCTLFISLSNQHRVGSMTATPKPLVLIILDGFGHSESHKGNAILAAKMPVMDRLYQTMPNGLISGSGMDVGLPDGQM GNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICAAVDKAVSAGKAVHIMGLLSDGGVHSHQDHLVAMAELAVKR GAEKIYLHAFLDGRDTPPRSAKKSLELMDATFARLGKGRTATIVGRYFAMDRDNRWDRVSSAYNLIVDSTADFHADSAVA GLEAAYARDENDEFVKATRIGEAARVEDGDAVVFMNFRADRARELTRVFVEDDFKDFERARQPKVNYVMLTQYAASIPAP SAFAAGSLKNVLGEYLADNGKTQLRIAETEKYAHVTFFFSGGREEPFPGEERILIPSPKVATYDLQPEMSAPEVTDKIVD AIEHQRYDVIVVNYANGDMVGHSGIMEAAIKAVECLDVCVGRIAEALEKVGGEALITADHGNVEQMTDDSTGQAHTAHTS EPVPFVYVGKRQLKVRQGGVLADVAPTMLHLLGMEKPQEMTGHSILVAE >Mature_528_residues PFPCTLFISLSNQHRVGSMTATPKPLVLIILDGFGHSESHKGNAILAAKMPVMDRLYQTMPNGLISGSGMDVGLPDGQMG NSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICAAVDKAVSAGKAVHIMGLLSDGGVHSHQDHLVAMAELAVKRG AEKIYLHAFLDGRDTPPRSAKKSLELMDATFARLGKGRTATIVGRYFAMDRDNRWDRVSSAYNLIVDSTADFHADSAVAG LEAAYARDENDEFVKATRIGEAARVEDGDAVVFMNFRADRARELTRVFVEDDFKDFERARQPKVNYVMLTQYAASIPAPS AFAAGSLKNVLGEYLADNGKTQLRIAETEKYAHVTFFFSGGREEPFPGEERILIPSPKVATYDLQPEMSAPEVTDKIVDA IEHQRYDVIVVNYANGDMVGHSGIMEAAIKAVECLDVCVGRIAEALEKVGGEALITADHGNVEQMTDDSTGQAHTAHTSE PVPFVYVGKRQLKVRQGGVLADVAPTMLHLLGMEKPQEMTGHSILVAE
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=514, Percent_Identity=64.7859922178988, Blast_Score=696, Evalue=0.0, Organism=Caenorhabditis elegans, GI32564249, Length=517, Percent_Identity=45.2611218568665, Blast_Score=441, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17507741, Length=517, Percent_Identity=45.2611218568665, Blast_Score=441, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 57543; Mature: 57412
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFPCTLFISLSNQHRVGSMTATPKPLVLIILDGFGHSESHKGNAILAAKMPVMDRLYQT CCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHH MPNGLISGSGMDVGLPDGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICA CCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH AVDKAVSAGKAVHIMGLLSDGGVHSHQDHLVAMAELAVKRGAEKIYLHAFLDGRDTPPRS HHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHH AKKSLELMDATFARLGKGRTATIVGRYFAMDRDNRWDRVSSAYNLIVDSTADFHADSAVA HHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHEEEEECCCCCCCCHHHH GLEAAYARDENDEFVKATRIGEAARVEDGDAVVFMNFRADRARELTRVFVEDDFKDFERA HHHHHHCCCCCCCEEEHHHCCCHHEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHH RQPKVNYVMLTQYAASIPAPSAFAAGSLKNVLGEYLADNGKTQLRIAETEKYAHVTFFFS CCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEEE GGREEPFPGEERILIPSPKVATYDLQPEMSAPEVTDKIVDAIEHQRYDVIVVNYANGDMV CCCCCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC GHSGIMEAAIKAVECLDVCVGRIAEALEKVGGEALITADHGNVEQMTDDSTGQAHTAHTS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCEEECCCC EPVPFVYVGKRQLKVRQGGVLADVAPTMLHLLGMEKPQEMTGHSILVAE CCCCEEEECCEEEEEECCCEEHHHHHHHHHHHCCCCCHHHCCCEEEEEC >Mature Secondary Structure PFPCTLFISLSNQHRVGSMTATPKPLVLIILDGFGHSESHKGNAILAAKMPVMDRLYQT CCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHH MPNGLISGSGMDVGLPDGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICA CCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH AVDKAVSAGKAVHIMGLLSDGGVHSHQDHLVAMAELAVKRGAEKIYLHAFLDGRDTPPRS HHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHH AKKSLELMDATFARLGKGRTATIVGRYFAMDRDNRWDRVSSAYNLIVDSTADFHADSAVA HHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHEEEEECCCCCCCCHHHH GLEAAYARDENDEFVKATRIGEAARVEDGDAVVFMNFRADRARELTRVFVEDDFKDFERA HHHHHHCCCCCCCEEEHHHCCCHHEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHH RQPKVNYVMLTQYAASIPAPSAFAAGSLKNVLGEYLADNGKTQLRIAETEKYAHVTFFFS CCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEEE GGREEPFPGEERILIPSPKVATYDLQPEMSAPEVTDKIVDAIEHQRYDVIVVNYANGDMV CCCCCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC GHSGIMEAAIKAVECLDVCVGRIAEALEKVGGEALITADHGNVEQMTDDSTGQAHTAHTS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCEEECCCC EPVPFVYVGKRQLKVRQGGVLADVAPTMLHLLGMEKPQEMTGHSILVAE CCCCEEEECCEEEEEECCCEEHHHHHHHHHHHCCCCCHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA