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The map label for this gene is yibP [H]

Identifier: 66048110

GI number: 66048110

Start: 5795992

End: 5797317

Strand: Direct

Name: yibP [H]

Synonym: Psyr_4886

Alternate gene names: 66048110

Gene position: 5795992-5797317 (Clockwise)

Preceding gene: 66048109

Following gene: 66048111

Centisome position: 95.11

GC content: 58.75

Gene sequence:

>1326_bases
ATGCTTCGCGCCTTGATTGCCCTTGCTCTGATCTGCCTGCTCAATCCGGCGTTTGCCGAAGACGAGCGTGTGCAAACCCA
AAAACAGATAGATGCTGCGCGTCAGGATGTGGCGGAGCTGCAAAAAGTCCTGGGCAAGCTTCAGGAAGAACGTGCAGGCG
TCCAGAAGGACCTGCGCACCACTGAAACCGAAATGGGCAAGTTGGAAAAGCAGGTCGAGGTCCTGCAAAAGGAACTAAAA
AAGACGGAAACCGAGCTGCAAAAGCTCGACAGTGAAAAAAAGAAACTCAACAGCGCCCGCGTTGAACAGCAACGCCTGAT
CGCCATCCAGGCCCGCGCCGCCTACCAGAGTGGCCGTCAGGAATACCTCAAGCTGCTGCTCAACCAGCAACATCCCGAGA
AGTTCGCGCGAACCCTCACCTATTACGATTACCTGAGCCAGGCGCGCCTGGAGCAGCTACGCAATTTCAACGAAACCCTG
CGCCAGCTGGCCAATGTCGAAAAAGACATCGACCTGCAACAGGCCCAGCTGCTGGTGCAGAAAAGCAACCTGGACAGCCA
GAGCGAAGAACTGGCCAAGGTTCGTCAGGAACGTCAGCAGGCACTGGCCAAGCTGAATCAGGACTACAAGGCCCGCGATC
AGAAAATGCAGGCGCGGCAGCAGGATCAGGCCGACCTGGCCAAAGTCCTCAAGACCATCGAAGAAACCCTGGCCCGCCAG
GCACGTGAAGCCGAAGAAGCTCGCCAGAAGGCGCTGGTCGCAGCCCGCGAGGCGGAAGAGAAGCGTCAGCGCGAAGCTGA
AGCCGTCGCCCGCAACAACAGCAACAACAGCAGTAGAAAAAGCGATGATGAACCGGCACCGCGTCGCCCGGTCAAAGCCC
CCGGCGCAGTCGTTTCCAGTGCCGGTGTTTCCTACGGCGGACCGTTTGCAGAGGCCAAGGGAAAACTTCCATGGCCCATC
GATGGTCGACTGCTTGCGCGTTTCGGTGAAGCCCGCGGTGATGACGAACGGACCAAATGGGACGGCGTCATGATCAGCGC
CGCAGCCGGAAGCCAGGTACGTGCCGTGCATGGCGGACGAGTGGTGTTCGCCGACTGGTTGCGCGGTGCCGGGCTTCTGG
TCATTCTCGACCATGGCAACGGTTATCTGACCCTTTACGGGCACAACCAGAGCCTGCTCAAGTCGGCAGGTGACATTGTA
AAAGCCGGTGAAGCGATTTCCACGGTCGGCAATAGTGGCGGTCAGGACACGGCAGCGTTGTACTTTGCTATTCGTCAGCA
GGGTCGCCCCAGCGATCCGGCCCAATGGTGCCGCACTCAAGGATAA

Upstream 100 bases:

>100_bases
GGCCTCAAAGCAGTGGCTGCGAGGCGTTTTTTTTGCAGCGCATGGCGGGCATACTAGGCCTGACATTTTTTCTCACAATT
CCTCGGTATCGCCCACCCAC

Downstream 100 bases:

>100_bases
GTCGGCGTCAATATCTGTAGGAGTTCGTTAGACATGCTGCATTTGTCCCGCCTCACCTCGCTGGCCCTGGCAATTGCCAT
CGTTATCGGCGCGCCTCTGG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MLRALIALALICLLNPAFAEDERVQTQKQIDAARQDVAELQKVLGKLQEERAGVQKDLRTTETEMGKLEKQVEVLQKELK
KTETELQKLDSEKKKLNSARVEQQRLIAIQARAAYQSGRQEYLKLLLNQQHPEKFARTLTYYDYLSQARLEQLRNFNETL
RQLANVEKDIDLQQAQLLVQKSNLDSQSEELAKVRQERQQALAKLNQDYKARDQKMQARQQDQADLAKVLKTIEETLARQ
AREAEEARQKALVAAREAEEKRQREAEAVARNNSNNSSRKSDDEPAPRRPVKAPGAVVSSAGVSYGGPFAEAKGKLPWPI
DGRLLARFGEARGDDERTKWDGVMISAAAGSQVRAVHGGRVVFADWLRGAGLLVILDHGNGYLTLYGHNQSLLKSAGDIV
KAGEAISTVGNSGGQDTAALYFAIRQQGRPSDPAQWCRTQG

Sequences:

>Translated_441_residues
MLRALIALALICLLNPAFAEDERVQTQKQIDAARQDVAELQKVLGKLQEERAGVQKDLRTTETEMGKLEKQVEVLQKELK
KTETELQKLDSEKKKLNSARVEQQRLIAIQARAAYQSGRQEYLKLLLNQQHPEKFARTLTYYDYLSQARLEQLRNFNETL
RQLANVEKDIDLQQAQLLVQKSNLDSQSEELAKVRQERQQALAKLNQDYKARDQKMQARQQDQADLAKVLKTIEETLARQ
AREAEEARQKALVAAREAEEKRQREAEAVARNNSNNSSRKSDDEPAPRRPVKAPGAVVSSAGVSYGGPFAEAKGKLPWPI
DGRLLARFGEARGDDERTKWDGVMISAAAGSQVRAVHGGRVVFADWLRGAGLLVILDHGNGYLTLYGHNQSLLKSAGDIV
KAGEAISTVGNSGGQDTAALYFAIRQQGRPSDPAQWCRTQG
>Mature_441_residues
MLRALIALALICLLNPAFAEDERVQTQKQIDAARQDVAELQKVLGKLQEERAGVQKDLRTTETEMGKLEKQVEVLQKELK
KTETELQKLDSEKKKLNSARVEQQRLIAIQARAAYQSGRQEYLKLLLNQQHPEKFARTLTYYDYLSQARLEQLRNFNETL
RQLANVEKDIDLQQAQLLVQKSNLDSQSEELAKVRQERQQALAKLNQDYKARDQKMQARQQDQADLAKVLKTIEETLARQ
AREAEEARQKALVAAREAEEKRQREAEAVARNNSNNSSRKSDDEPAPRRPVKAPGAVVSSAGVSYGGPFAEAKGKLPWPI
DGRLLARFGEARGDDERTKWDGVMISAAAGSQVRAVHGGRVVFADWLRGAGLLVILDHGNGYLTLYGHNQSLLKSAGDIV
KAGEAISTVGNSGGQDTAALYFAIRQQGRPSDPAQWCRTQG

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=437, Percent_Identity=29.9771167048055, Blast_Score=169, Evalue=4e-43,
Organism=Escherichia coli, GI1789099, Length=120, Percent_Identity=35.8333333333333, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI87082174, Length=127, Percent_Identity=34.6456692913386, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 49245; Mature: 49245

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRALIALALICLLNPAFAEDERVQTQKQIDAARQDVAELQKVLGKLQEERAGVQKDLRT
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TETEMGKLEKQVEVLQKELKKTETELQKLDSEKKKLNSARVEQQRLIAIQARAAYQSGRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYLKLLLNQQHPEKFARTLTYYDYLSQARLEQLRNFNETLRQLANVEKDIDLQQAQLLVQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHH
KSNLDSQSEELAKVRQERQQALAKLNQDYKARDQKMQARQQDQADLAKVLKTIEETLARQ
HCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AREAEEARQKALVAAREAEEKRQREAEAVARNNSNNSSRKSDDEPAPRRPVKAPGAVVSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
AGVSYGGPFAEAKGKLPWPIDGRLLARFGEARGDDERTKWDGVMISAAAGSQVRAVHGGR
CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCEEEECCCE
VVFADWLRGAGLLVILDHGNGYLTLYGHNQSLLKSAGDIVKAGEAISTVGNSGGQDTAAL
EEEHHHHHCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
YFAIRQQGRPSDPAQWCRTQG
HHHHHHCCCCCCHHHHHCCCC
>Mature Secondary Structure
MLRALIALALICLLNPAFAEDERVQTQKQIDAARQDVAELQKVLGKLQEERAGVQKDLRT
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TETEMGKLEKQVEVLQKELKKTETELQKLDSEKKKLNSARVEQQRLIAIQARAAYQSGRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYLKLLLNQQHPEKFARTLTYYDYLSQARLEQLRNFNETLRQLANVEKDIDLQQAQLLVQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHH
KSNLDSQSEELAKVRQERQQALAKLNQDYKARDQKMQARQQDQADLAKVLKTIEETLARQ
HCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AREAEEARQKALVAAREAEEKRQREAEAVARNNSNNSSRKSDDEPAPRRPVKAPGAVVSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
AGVSYGGPFAEAKGKLPWPIDGRLLARFGEARGDDERTKWDGVMISAAAGSQVRAVHGGR
CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCEEEECCCE
VVFADWLRGAGLLVILDHGNGYLTLYGHNQSLLKSAGDIVKAGEAISTVGNSGGQDTAAL
EEEHHHHHCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
YFAIRQQGRPSDPAQWCRTQG
HHHHHHCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]