| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is proX [C]
Identifier: 66048053
GI number: 66048053
Start: 5731830
End: 5732798
Strand: Direct
Name: proX [C]
Synonym: Psyr_4829
Alternate gene names: 66048053
Gene position: 5731830-5732798 (Clockwise)
Preceding gene: 66048052
Following gene: 66048054
Centisome position: 94.06
GC content: 58.93
Gene sequence:
>969_bases ATGAATATGAAAAAGGCCCTGTTGACCACATTGGTATCCGCTGGCCTGCTCGCCAGCGCAGGCGCAAGTCAGGCTGCCGG CTGGTGCGAATCAGGCAAGCCGGTGAAATTCGCCGGTCTTAACTGGGAAAGCGCGATGCTGCTGACCGATGTACTGCAGG TCATTCTGGACAAGGGTTACGGCTGCACCGTTGACGCCCTGCCCGGCAATTCCATCGCCATGGAAAATGCCCTGGGCACC AACGATATCCAGATCTTTGCCGAAGAATGGGTAGGTCGCAGCGAGGTCTGGAACAAGGCCGCGGCTGCCGGCAAGGTGGT CGGTGTCGGCGCACCGATCGTCGGCGCTGTGGAAGGCTGGTACGTGCCCCGCTACGTGATCGAAGGCGATGCCAAACGCA AGCTGGAAGCCAAGGCACCCAACCTGAAATCCATCAGCGATCTGGCCCAGTATTCAGCCGTGTTCAAGGATCAGGAAGAG CCTGGCAAGGGCCGCTTCTACAACTGTCCGGCCGGCTGGACCTGTGAGCTGGAAAACAGCGAAATGCTCAAGAGCTACGG CCTGGAAAGCAAATACACCAACTTCCGCCCGGGCACCGGCCCCGCGCTGGATGCGGCGATTCTCTCCAGTTACAAACGTG GCGAGCCGATCCTGACCTACTATTGGTCACCCACGCCGCTCATGGGTCAGGTAGACCTGGTGCGTCTGGAGGAGAAAGCC GGGGTCAACAAGACGATCGATATCAAGGTCGGCGTGTCCAAAGTGTTCCACGATGAGGCCCCTGAACTGGTCGCCATCCT GGAAAAGGTCAACCTGCCGATCGACCTGCTCAACCAGAACCTGGGGCGCATGGCCAAGGAACGCATCGAATCGCCGAAGC TGGCGAAGATTTTCCTGAAAGAGCACCCCGAAGTCTGGCACAAATGGGTCAGCGAAGACGCCGCGAAGAAGGTGGACGCT TCGTTGTAA
Upstream 100 bases:
>100_bases CATCAGGCCGGCACACGTCGGGGACGGGCATGAGCATGCCCACGGGCCGGATGCCTACTTGAAGCTGCCGTCATCCATTT AAGGCTTAGGAGCATCGACA
Downstream 100 bases:
>100_bases ACGACCGGGCTGTCGGACTGAACGGTTCGACAGCCCTGTCGTTGACCCGACACACCTCATTTGAGAGCCGCTTATGTTTC CTGAAAGCTTCACTTTCTCG
Product: substrate-binding region of ABC-type glycine betaine transport system
Products: ADP; phosphate; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MNMKKALLTTLVSAGLLASAGASQAAGWCESGKPVKFAGLNWESAMLLTDVLQVILDKGYGCTVDALPGNSIAMENALGT NDIQIFAEEWVGRSEVWNKAAAAGKVVGVGAPIVGAVEGWYVPRYVIEGDAKRKLEAKAPNLKSISDLAQYSAVFKDQEE PGKGRFYNCPAGWTCELENSEMLKSYGLESKYTNFRPGTGPALDAAILSSYKRGEPILTYYWSPTPLMGQVDLVRLEEKA GVNKTIDIKVGVSKVFHDEAPELVAILEKVNLPIDLLNQNLGRMAKERIESPKLAKIFLKEHPEVWHKWVSEDAAKKVDA SL
Sequences:
>Translated_322_residues MNMKKALLTTLVSAGLLASAGASQAAGWCESGKPVKFAGLNWESAMLLTDVLQVILDKGYGCTVDALPGNSIAMENALGT NDIQIFAEEWVGRSEVWNKAAAAGKVVGVGAPIVGAVEGWYVPRYVIEGDAKRKLEAKAPNLKSISDLAQYSAVFKDQEE PGKGRFYNCPAGWTCELENSEMLKSYGLESKYTNFRPGTGPALDAAILSSYKRGEPILTYYWSPTPLMGQVDLVRLEEKA GVNKTIDIKVGVSKVFHDEAPELVAILEKVNLPIDLLNQNLGRMAKERIESPKLAKIFLKEHPEVWHKWVSEDAAKKVDA SL >Mature_322_residues MNMKKALLTTLVSAGLLASAGASQAAGWCESGKPVKFAGLNWESAMLLTDVLQVILDKGYGCTVDALPGNSIAMENALGT NDIQIFAEEWVGRSEVWNKAAAAGKVVGVGAPIVGAVEGWYVPRYVIEGDAKRKLEAKAPNLKSISDLAQYSAVFKDQEE PGKGRFYNCPAGWTCELENSEMLKSYGLESKYTNFRPGTGPALDAAILSSYKRGEPILTYYWSPTPLMGQVDLVRLEEKA GVNKTIDIKVGVSKVFHDEAPELVAILEKVNLPIDLLNQNLGRMAKERIESPKLAKIFLKEHPEVWHKWVSEDAAKKVDA SL
Specific function: Member Of A Multicomponent Binding-Protein-Dependent Transport System (The Prou Transporter) Which Serves As The Glycine Betaine/L-Proline Transporter. [C]
COG id: COG2113
COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35072; Mature: 35072
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMKKALLTTLVSAGLLASAGASQAAGWCESGKPVKFAGLNWESAMLLTDVLQVILDKGY CCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCC GCTVDALPGNSIAMENALGTNDIQIFAEEWVGRSEVWNKAAAAGKVVGVGAPIVGAVEGW CCEEECCCCCCEEECCCCCCCHHEEHHHHHCCHHHHHHHHHHCCCEEECCCCHHHHHCCC YVPRYVIEGDAKRKLEAKAPNLKSISDLAQYSAVFKDQEEPGKGRFYNCPAGWTCELENS CCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCH EMLKSYGLESKYTNFRPGTGPALDAAILSSYKRGEPILTYYWSPTPLMGQVDLVRLEEKA HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEEEHHHC GVNKTIDIKVGVSKVFHDEAPELVAILEKVNLPIDLLNQNLGRMAKERIESPKLAKIFLK CCCEEEEEEECHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH EHPEVWHKWVSEDAAKKVDASL HCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNMKKALLTTLVSAGLLASAGASQAAGWCESGKPVKFAGLNWESAMLLTDVLQVILDKGY CCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCC GCTVDALPGNSIAMENALGTNDIQIFAEEWVGRSEVWNKAAAAGKVVGVGAPIVGAVEGW CCEEECCCCCCEEECCCCCCCHHEEHHHHHCCHHHHHHHHHHCCCEEECCCCHHHHHCCC YVPRYVIEGDAKRKLEAKAPNLKSISDLAQYSAVFKDQEEPGKGRFYNCPAGWTCELENS CCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCH EMLKSYGLESKYTNFRPGTGPALDAAILSSYKRGEPILTYYWSPTPLMGQVDLVRLEEKA HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEEEHHHC GVNKTIDIKVGVSKVFHDEAPELVAILEKVNLPIDLLNQNLGRMAKERIESPKLAKIFLK CCCEEEEEEECHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH EHPEVWHKWVSEDAAKKVDASL HCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-proline [Periplasm]; H2O [C]
Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA