Click here to switch to the map view.

The map label for this gene is 66048044

Identifier: 66048044

GI number: 66048044

Start: 5716856

End: 5717488

Strand: Direct

Name: 66048044

Synonym: Psyr_4820

Alternate gene names: NA

Gene position: 5716856-5717488 (Clockwise)

Preceding gene: 66048043

Following gene: 66048045

Centisome position: 93.82

GC content: 60.82

Gene sequence:

>633_bases
ATGAGCAGACACACGATGCGCCGCCTGCTGACCTGCCTGTTGTTGCTCTTGACGCTGCCCGCAGTGGCCGACGTCTACAC
CTATATCGACGCGCAGGGTAATCGGGTGTTTACCGACCAGCCGCGCAAGAACGCCACCCGCGTCGACATCGCCCCCAGCA
ACAACATGACCGGCACGCCGCCGACCCGCACCTTGAAGGCCCACCCCGCCAAACCGGCAGTACAACCGATGTTTCATTAC
CAGTTGCTGAGAATCCTGGTGCCTGAACCGGACGCTACTCTGGTCAATCCCAGTGGCGACCTGATCGTTACCGTCACCAG
CGAACCGGTGTTACAGGCGGGGCACAGCTACCGGCTGCTGCTGGATAACGTTGCCGTCGGCCAGGCCGGCCGCAGCCCGG
TGTTTCCGTTGAGCAATGTGGATCGCGGCACCCATCAACTGTCGGTAGAGATTTTCGACGAGCTTGGCCGTGTTCTGGAA
AAAACCCCGAACCAGCCGTTTCACGTGCAGCGCATTTCCCTGGCGCAAAAGCGCGCGACCCACCCCTGCAAGGATGATGA
CTACGGCGTGCGTCCGGAGTGTCCGCTCAAGGACAAGCCCGAGCCAAAAAGCAGCATTCTGCCCTTCTTTTGA

Upstream 100 bases:

>100_bases
GTGAACACAGTTTCGCGGTGGTCGTGAAAGACGGCGAGCGGATCATTCAGCAGAGCGAAACCATCACCCTGACCGTACAG
CGCGTACACCTCGGCAAGCC

Downstream 100 bases:

>100_bases
TCTCGCCAAATCGTCGGCACCTTTTTGGTGCGCTCAATGCCTGCCTGCGCAACAATACAGCCCAATCTGGTTCAGGAACC
TTGGCCGGGTAGCGCCGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSRHTMRRLLTCLLLLLTLPAVADVYTYIDAQGNRVFTDQPRKNATRVDIAPSNNMTGTPPTRTLKAHPAKPAVQPMFHY
QLLRILVPEPDATLVNPSGDLIVTVTSEPVLQAGHSYRLLLDNVAVGQAGRSPVFPLSNVDRGTHQLSVEIFDELGRVLE
KTPNQPFHVQRISLAQKRATHPCKDDDYGVRPECPLKDKPEPKSSILPFF

Sequences:

>Translated_210_residues
MSRHTMRRLLTCLLLLLTLPAVADVYTYIDAQGNRVFTDQPRKNATRVDIAPSNNMTGTPPTRTLKAHPAKPAVQPMFHY
QLLRILVPEPDATLVNPSGDLIVTVTSEPVLQAGHSYRLLLDNVAVGQAGRSPVFPLSNVDRGTHQLSVEIFDELGRVLE
KTPNQPFHVQRISLAQKRATHPCKDDDYGVRPECPLKDKPEPKSSILPFF
>Mature_209_residues
SRHTMRRLLTCLLLLLTLPAVADVYTYIDAQGNRVFTDQPRKNATRVDIAPSNNMTGTPPTRTLKAHPAKPAVQPMFHYQ
LLRILVPEPDATLVNPSGDLIVTVTSEPVLQAGHSYRLLLDNVAVGQAGRSPVFPLSNVDRGTHQLSVEIFDELGRVLEK
TPNQPFHVQRISLAQKRATHPCKDDDYGVRPECPLKDKPEPKSSILPFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23375; Mature: 23244

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRHTMRRLLTCLLLLLTLPAVADVYTYIDAQGNRVFTDQPRKNATRVDIAPSNNMTGTP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCCCCCCC
PTRTLKAHPAKPAVQPMFHYQLLRILVPEPDATLVNPSGDLIVTVTSEPVLQAGHSYRLL
CCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCHHHHCCCCEEEE
LDNVAVGQAGRSPVFPLSNVDRGTHQLSVEIFDELGRVLEKTPNQPFHVQRISLAQKRAT
EECEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCC
HPCKDDDYGVRPECPLKDKPEPKSSILPFF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRHTMRRLLTCLLLLLTLPAVADVYTYIDAQGNRVFTDQPRKNATRVDIAPSNNMTGTP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCCCCCCC
PTRTLKAHPAKPAVQPMFHYQLLRILVPEPDATLVNPSGDLIVTVTSEPVLQAGHSYRLL
CCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCHHHHCCCCEEEE
LDNVAVGQAGRSPVFPLSNVDRGTHQLSVEIFDELGRVLEKTPNQPFHVQRISLAQKRAT
EECEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCC
HPCKDDDYGVRPECPLKDKPEPKSSILPFF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA