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The map label for this gene is yafE [C]

Identifier: 66048017

GI number: 66048017

Start: 5681724

End: 5682719

Strand: Direct

Name: yafE [C]

Synonym: Psyr_4793

Alternate gene names: 66048017

Gene position: 5681724-5682719 (Clockwise)

Preceding gene: 66048010

Following gene: 66048018

Centisome position: 93.24

GC content: 61.35

Gene sequence:

>996_bases
ATGAACCTGCGTGTACCTGCCATTCGCCACGATGCATGCGACGACCTCTCTGCATTGTGCAAGGCCGGCGGCGATCCCTT
GCGGCTGAACGTGCTGCGTGTGCTGACCAACGACTCGTTCGGCGTGCTGGAACTGGCGCAGATTTTCGCCATCGGCCAGT
CCGGCATGAGCCACCACCTCAAGGTGCTGGCGCAGGCTGATCTGGTCGCGACACGGCGTGAAGGCAACGCGATTTTCTAC
CGCCGCGCCCTGCCCCACACCGAATTACCGGGCGGCAGGCTGCATGCGGCGCTGCTCGATGAAGTGGATACGCTGGACTT
GCCGGACGACGTACAAAGCCGTATCGGCCTGGTGCATCGGCAACGGGCATTGGCCAGTCAGGATTTTTTCGCCCGCACCG
CAGAAAAGTTTCGCGCCCAGCAGGACCTGATCGCCGGTTTGGCGCAGTACAGCGAAAGCCTGCTGACCTTGCTCGACAAA
CTGAGCTTCGGCGCGCAAGCGACCGCTCTGGAAGTAGGCCCCGGCGACGGCGGCTTCCTTCCTGAGCTGGCGCGACGCTT
CGGTCAGGTGATCGCGATGGACAACAGCCCGGTCATGCTGGACCTGGCACGCGGCGTCTGCGAGCGCAAGGCACTGGCTA
ACGTTGAGCTCAGACTGGCCGATGCACTGACCGACGCTAAAGTCAGTGCCGATTGCGTCGTCCTCAACATGGTGCTGCAT
CATTTCGCGGTACCGGCCGAAGCCTTGAGGCAACTGGCCGAACATGTAAAACCCGGCGGTAGCCTGCTGGTAACAGAATT
GTGTAGTCATGACCAGAGTTGGGCCAGGGAGGCCTGTGGCGATCTCTGGTTAGGTTTCGAGCAGGAAGACCTGGCCCGTT
GGGCCATCGCTGCGGGGCTAGTTCCCGGGGAAAGCCTCTATGTAGGCTTACGTAATGGTTTCCAGATCCAGGTTCGCCAT
TTTCAGCGACCGGCTGGCGACACTCACCATCGGTAA

Upstream 100 bases:

>100_bases
CAAGTTCACAACGCCTGACCGACGCCATCCATCCCGCAATATCAAAACTTTTTGATATTGCCCTTGCGACACTCCGGATC
GCTCTCTAGACTGCGCAGCT

Downstream 100 bases:

>100_bases
AATGAAGGAAACCCGTAGAGATGAGCGAATACTCACTTTTCACCTCCGAGTCCGTGTCCGAAGGGCATCCGGACAAGATC
GCCGACCAGATTTCCGACGC

Product: regulatory protein, ArsR

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Methyltransferase Type; SAM-Dependent Methyltransferase; Transcriptional Regulator; Methyltransferase Domain Family; ArsR Family Regulatory Protein; Transcriptional Regulator Arsr Family; ArsR-Family Transcriptional Regulator; ArsR Domain Proteni; Transcriptional Regulator ArsR Family/Methyltransferase; Regulatory Protein; UbiE/COQ5 Family Methlytransferase; ArsR Family Methyltransferase Transcriptional Regulator; Ribosomal Methyltransferase; Methyltransferase Transcriptional Regulator Protein; Methyltransferase Domain Family Protein

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MNLRVPAIRHDACDDLSALCKAGGDPLRLNVLRVLTNDSFGVLELAQIFAIGQSGMSHHLKVLAQADLVATRREGNAIFY
RRALPHTELPGGRLHAALLDEVDTLDLPDDVQSRIGLVHRQRALASQDFFARTAEKFRAQQDLIAGLAQYSESLLTLLDK
LSFGAQATALEVGPGDGGFLPELARRFGQVIAMDNSPVMLDLARGVCERKALANVELRLADALTDAKVSADCVVLNMVLH
HFAVPAEALRQLAEHVKPGGSLLVTELCSHDQSWAREACGDLWLGFEQEDLARWAIAAGLVPGESLYVGLRNGFQIQVRH
FQRPAGDTHHR

Sequences:

>Translated_331_residues
MNLRVPAIRHDACDDLSALCKAGGDPLRLNVLRVLTNDSFGVLELAQIFAIGQSGMSHHLKVLAQADLVATRREGNAIFY
RRALPHTELPGGRLHAALLDEVDTLDLPDDVQSRIGLVHRQRALASQDFFARTAEKFRAQQDLIAGLAQYSESLLTLLDK
LSFGAQATALEVGPGDGGFLPELARRFGQVIAMDNSPVMLDLARGVCERKALANVELRLADALTDAKVSADCVVLNMVLH
HFAVPAEALRQLAEHVKPGGSLLVTELCSHDQSWAREACGDLWLGFEQEDLARWAIAAGLVPGESLYVGLRNGFQIQVRH
FQRPAGDTHHR
>Mature_331_residues
MNLRVPAIRHDACDDLSALCKAGGDPLRLNVLRVLTNDSFGVLELAQIFAIGQSGMSHHLKVLAQADLVATRREGNAIFY
RRALPHTELPGGRLHAALLDEVDTLDLPDDVQSRIGLVHRQRALASQDFFARTAEKFRAQQDLIAGLAQYSESLLTLLDK
LSFGAQATALEVGPGDGGFLPELARRFGQVIAMDNSPVMLDLARGVCERKALANVELRLADALTDAKVSADCVVLNMVLH
HFAVPAEALRQLAEHVKPGGSLLVTELCSHDQSWAREACGDLWLGFEQEDLARWAIAAGLVPGESLYVGLRNGFQIQVRH
FQRPAGDTHHR

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36122; Mature: 36122

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRVPAIRHDACDDLSALCKAGGDPLRLNVLRVLTNDSFGVLELAQIFAIGQSGMSHHL
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHH
KVLAQADLVATRREGNAIFYRRALPHTELPGGRLHAALLDEVDTLDLPDDVQSRIGLVHR
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QRALASQDFFARTAEKFRAQQDLIAGLAQYSESLLTLLDKLSFGAQATALEVGPGDGGFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCH
PELARRFGQVIAMDNSPVMLDLARGVCERKALANVELRLADALTDAKVSADCVVLNMVLH
HHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHH
HFAVPAEALRQLAEHVKPGGSLLVTELCSHDQSWAREACGDLWLGFEQEDLARWAIAAGL
HHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
VPGESLYVGLRNGFQIQVRHFQRPAGDTHHR
CCCCEEEEEECCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MNLRVPAIRHDACDDLSALCKAGGDPLRLNVLRVLTNDSFGVLELAQIFAIGQSGMSHHL
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHH
KVLAQADLVATRREGNAIFYRRALPHTELPGGRLHAALLDEVDTLDLPDDVQSRIGLVHR
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QRALASQDFFARTAEKFRAQQDLIAGLAQYSESLLTLLDKLSFGAQATALEVGPGDGGFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCH
PELARRFGQVIAMDNSPVMLDLARGVCERKALANVELRLADALTDAKVSADCVVLNMVLH
HHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHH
HFAVPAEALRQLAEHVKPGGSLLVTELCSHDQSWAREACGDLWLGFEQEDLARWAIAAGL
HHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
VPGESLYVGLRNGFQIQVRHFQRPAGDTHHR
CCCCEEEEEECCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA