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The map label for this gene is tldD [C]

Identifier: 66047991

GI number: 66047991

Start: 5642392

End: 5643834

Strand: Direct

Name: tldD [C]

Synonym: Psyr_4767

Alternate gene names: 66047991

Gene position: 5642392-5643834 (Clockwise)

Preceding gene: 66047990

Following gene: 66047992

Centisome position: 92.59

GC content: 61.68

Gene sequence:

>1443_bases
ATGTTCGATTTCTCCGCCCGGCTCAAGCAGCATTTCGCTGCCCTGCAGAGTGAAGCGCAATTCTTTTCCGTACGTTACGT
GCACCGCACCGGCCAGCGCCTATGCGTGCGCAAGAATGTGGCCGAACCGCCGTCACTGATCAGCGACGAGGGCGCCATGC
TGACCGTGCGCCTGAATGGCGTTGAAGCCTACGCCGCCACCAACGACATCTCCCTGAAGGGTTTGCAGGCTGCCTTGCAG
CAGGCCGAAGCGCTGGCCCGCCGTCTGGCACCGCATGCGCTGCTGGACCTGAGCGATCAAGCTGTCTCGAGCGCCAAGGC
TGACTACCTGTCGCCAAACATGGATCGAGCCTTCCCGCCGCTGAGCGACTGCATCGGCCTGTTGATGGCCGAATCCAGCG
CGGTCCCGGCAGACGAACGCCTGGTCAACTGGCAGGCCATACTGGACCTGGAAACCGTCGAGCAAATCTACCTCAACAGC
GCGGGCGCAGAATTGAGTCAGGCACAGCGCTTCGTGTTTCCCGGCATGAGCGTGACGGCCTACGACGGTCGCGACAGCCA
GACGCGCACCCTGGGCGGGCATAACTTCGGCCAGCAAGGTGGCATCGAAGTGCTGAGCAGTTGCGGCCTGATCGGGTCTG
CCGCCACTGTTGCCGACGAGGCCTTGCAGCTGATCCTCGCCCCCAACACACCATCAGGCCCACGCGACCTGCTGCTGATG
CCGGATCAGATGGTCCTGCAGATTCACGAGTCCATCGGCCACCCCCTGGAGCTGGACCGGATTCTCGGTGACGAGCGCAA
TTACGCAGGCACCAGTTTCGTCAAAACGACTGACTTCGGCACCCTGCAATACGGTTCCAGCCTGCTGAATGTAACCTTCG
ACCCGGAGATTCCCGAGCAACTGGCCAGCTACGCGCACGACGACGACGGCACGTCAGCCAGCAAGCAGTTCCTGATTCGT
GACGGCCTGCTGCAGCGCCCGCTCGGTGGTGCCCTGTCGCAATACCGCAGCGGTCTGGCAGGCGTCGCCAACAGCCGCGC
CTCCAGCTGGAACCGTGCACCCATCGATCGCATGGCCAACCTGAACATCGAACCGGGTGACCAGTCGCTGGACAGTCTGA
TCGGCAACATCGAGCACGGCATTCTGATGTCGAGCAATCGCTCCTGGTCCATCGATGACGCACGCAACAAATTCCAGTTC
GGCTGCGAATGGGGCCAACTGATCGAGAACGGCGAGCTCAAGGGCGTGGTGAAGAACCCTAACTACCGTGCGATCTCCGC
GCAATTCTGGAAAAACCTCAGCGCCGTAGGTGATGCCAGCACGTTCAAAGTGCTGGGCACGCCGAACTGCGGCAAGGGCG
AACCCAACCAGGTGATCCGTGTAGGTCATGCCTCTCCGGCGTGTGTGTTTGCCAATGTCGATGTGTTTGGAGGAGATGCC
TGA

Upstream 100 bases:

>100_bases
TGCAGCCTGACGAGCGACGGGTTAATCTCCTTCTTGACGGCAAACGGCCCACAAGGCCGTCCGGACTTTACCGACCGCCC
TCAAGAAGGAGCTTGTCTGC

Downstream 100 bases:

>100_bases
TGTCGCACCAACAGCAGTTCGAGGCGCTGGTCGCCGTGCTCAAGGCTGCCATCAGCCCGACGGAACACTTCACCCTGGCC
TACGACGCCGAGGCGTCTGA

Product: peptidase U62, modulator of DNA gyrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MFDFSARLKQHFAALQSEAQFFSVRYVHRTGQRLCVRKNVAEPPSLISDEGAMLTVRLNGVEAYAATNDISLKGLQAALQ
QAEALARRLAPHALLDLSDQAVSSAKADYLSPNMDRAFPPLSDCIGLLMAESSAVPADERLVNWQAILDLETVEQIYLNS
AGAELSQAQRFVFPGMSVTAYDGRDSQTRTLGGHNFGQQGGIEVLSSCGLIGSAATVADEALQLILAPNTPSGPRDLLLM
PDQMVLQIHESIGHPLELDRILGDERNYAGTSFVKTTDFGTLQYGSSLLNVTFDPEIPEQLASYAHDDDGTSASKQFLIR
DGLLQRPLGGALSQYRSGLAGVANSRASSWNRAPIDRMANLNIEPGDQSLDSLIGNIEHGILMSSNRSWSIDDARNKFQF
GCEWGQLIENGELKGVVKNPNYRAISAQFWKNLSAVGDASTFKVLGTPNCGKGEPNQVIRVGHASPACVFANVDVFGGDA

Sequences:

>Translated_480_residues
MFDFSARLKQHFAALQSEAQFFSVRYVHRTGQRLCVRKNVAEPPSLISDEGAMLTVRLNGVEAYAATNDISLKGLQAALQ
QAEALARRLAPHALLDLSDQAVSSAKADYLSPNMDRAFPPLSDCIGLLMAESSAVPADERLVNWQAILDLETVEQIYLNS
AGAELSQAQRFVFPGMSVTAYDGRDSQTRTLGGHNFGQQGGIEVLSSCGLIGSAATVADEALQLILAPNTPSGPRDLLLM
PDQMVLQIHESIGHPLELDRILGDERNYAGTSFVKTTDFGTLQYGSSLLNVTFDPEIPEQLASYAHDDDGTSASKQFLIR
DGLLQRPLGGALSQYRSGLAGVANSRASSWNRAPIDRMANLNIEPGDQSLDSLIGNIEHGILMSSNRSWSIDDARNKFQF
GCEWGQLIENGELKGVVKNPNYRAISAQFWKNLSAVGDASTFKVLGTPNCGKGEPNQVIRVGHASPACVFANVDVFGGDA
>Mature_480_residues
MFDFSARLKQHFAALQSEAQFFSVRYVHRTGQRLCVRKNVAEPPSLISDEGAMLTVRLNGVEAYAATNDISLKGLQAALQ
QAEALARRLAPHALLDLSDQAVSSAKADYLSPNMDRAFPPLSDCIGLLMAESSAVPADERLVNWQAILDLETVEQIYLNS
AGAELSQAQRFVFPGMSVTAYDGRDSQTRTLGGHNFGQQGGIEVLSSCGLIGSAATVADEALQLILAPNTPSGPRDLLLM
PDQMVLQIHESIGHPLELDRILGDERNYAGTSFVKTTDFGTLQYGSSLLNVTFDPEIPEQLASYAHDDDGTSASKQFLIR
DGLLQRPLGGALSQYRSGLAGVANSRASSWNRAPIDRMANLNIEPGDQSLDSLIGNIEHGILMSSNRSWSIDDARNKFQF
GCEWGQLIENGELKGVVKNPNYRAISAQFWKNLSAVGDASTFKVLGTPNCGKGEPNQVIRVGHASPACVFANVDVFGGDA

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=264, Percent_Identity=28.7878787878788, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 51786; Mature: 51786

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDFSARLKQHFAALQSEAQFFSVRYVHRTGQRLCVRKNVAEPPSLISDEGAMLTVRLNG
CCCHHHHHHHHHHHHHHHHHHHEEHHHHHCCHHHHHHCCCCCCCCCCCCCCCEEEEEECC
VEAYAATNDISLKGLQAALQQAEALARRLAPHALLDLSDQAVSSAKADYLSPNMDRAFPP
EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCC
LSDCIGLLMAESSAVPADERLVNWQAILDLETVEQIYLNSAGAELSQAQRFVFPGMSVTA
HHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEE
YDGRDSQTRTLGGHNFGQQGGIEVLSSCGLIGSAATVADEALQLILAPNTPSGPRDLLLM
ECCCCCCCEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHEEEECCCCCCCCCCEEEC
PDQMVLQIHESIGHPLELDRILGDERNYAGTSFVKTTDFGTLQYGSSLLNVTFDPEIPEQ
CHHHHHHHHHHHCCCEEHHHHHCCCCCCCCCCEEEECCCCCHHHCCEEEEEEECCCHHHH
LASYAHDDDGTSASKQFLIRDGLLQRPLGGALSQYRSGLAGVANSRASSWNRAPIDRMAN
HHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHC
LNIEPGDQSLDSLIGNIEHGILMSSNRSWSIDDARNKFQFGCEWGQLIENGELKGVVKNP
CCCCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHCCHHEECCCHHHHHCCCCEEEEEECC
NYRAISAQFWKNLSAVGDASTFKVLGTPNCGKGEPNQVIRVGHASPACVFANVDVFGGDA
CCEEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCC
>Mature Secondary Structure
MFDFSARLKQHFAALQSEAQFFSVRYVHRTGQRLCVRKNVAEPPSLISDEGAMLTVRLNG
CCCHHHHHHHHHHHHHHHHHHHEEHHHHHCCHHHHHHCCCCCCCCCCCCCCCEEEEEECC
VEAYAATNDISLKGLQAALQQAEALARRLAPHALLDLSDQAVSSAKADYLSPNMDRAFPP
EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCC
LSDCIGLLMAESSAVPADERLVNWQAILDLETVEQIYLNSAGAELSQAQRFVFPGMSVTA
HHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEE
YDGRDSQTRTLGGHNFGQQGGIEVLSSCGLIGSAATVADEALQLILAPNTPSGPRDLLLM
ECCCCCCCEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHEEEECCCCCCCCCCEEEC
PDQMVLQIHESIGHPLELDRILGDERNYAGTSFVKTTDFGTLQYGSSLLNVTFDPEIPEQ
CHHHHHHHHHHHCCCEEHHHHHCCCCCCCCCCEEEECCCCCHHHCCEEEEEEECCCHHHH
LASYAHDDDGTSASKQFLIRDGLLQRPLGGALSQYRSGLAGVANSRASSWNRAPIDRMAN
HHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHC
LNIEPGDQSLDSLIGNIEHGILMSSNRSWSIDDARNKFQFGCEWGQLIENGELKGVVKNP
CCCCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHCCHHEECCCHHHHHCCCCEEEEEECC
NYRAISAQFWKNLSAVGDASTFKVLGTPNCGKGEPNQVIRVGHASPACVFANVDVFGGDA
CCEEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]