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The map label for this gene is soxB [H]

Identifier: 66047937

GI number: 66047937

Start: 5584702

End: 5585952

Strand: Direct

Name: soxB [H]

Synonym: Psyr_4713

Alternate gene names: 66047937

Gene position: 5584702-5585952 (Clockwise)

Preceding gene: 66047936

Following gene: 66047938

Centisome position: 91.65

GC content: 62.75

Gene sequence:

>1251_bases
ATGCAGCATTACTCAGGCTTCGGCCTTCTCAAGCATTCCCTCAGCCACCATGAAAACTGGCAGCGCATGTGGCGCACGCC
GACCCCGAAAAAGGTCTACGACGTGGTCATCGTCGGCGGCGGCGGGCACGGCCTGGCGACGGCCTATTATCTGGCCAAGG
AGCACGGCATCACCAACGTGGCCGTGGTCGAGAAAGGCTGGCTGGGCGGTGGCAACACTGCGCGCAACACCACCATCGTG
CGCTCCAACTACCTGTGGGACGAGTCGGCCCACCTGTATGAACACGCGATGAAACTGTGGGAAGGCCTGTCCCAGGAACT
GAACTACAACGTCATGTTCTCCCAGCGCGGCGTCTACAACCTGTGCCACACCCTGCAGGACATGCGCGACTCCGAGCGCC
GCGTCAGCGCCAACCGGCTTAACGGCGTGGACGGCGAATTGCTCAACGGCCAGCAGGTCGCCGAGGAAATCCCGTACCTG
GACTGCTCGAAAAACACCCGTTACCCGATCATCGGCGCAACCGTTCAGCGCCGTGGTGGCGTCGCCCGTCACGACGCGGT
GGCCTGGGGCTTCGCCCGTGCGGCCGATGCGCTGGGCGTTGACCTGATTCAGCAGACCGAAGTCATCGGCTTTCGCAAGG
AAAACGGCGTGTGCATCGGAGTGGAAACCAACAAGGGTTTCATCGGTGCCAAACGTGTCGGTGTGGTCACCGCCGGCAAC
TCCGGGCACATGGCCAGGCTGGCAGGCTTCCGTCTGCCCATCGAATCACATCCGTTGCAGGCACTGGTTTCCGAGCCGAT
CAAACCGATTATCGACAGCGTCATCATGTCCAACGCGGTACACGGCTACATCAGCCAGTCCGACAAGGGCGACCTGGTGA
TCGGCGCCGGTATCGACAGTTGGGTCGGCTACGGCCAGCGCGGCTCGTACCCGGTGATCGAACACACCATCCAGGCCATC
GTCGAGATGTTCCCGGTGCTGTCCCGCGTGCGCATGAACCGTCAGTGGGGCGGCATCGTCGACACCACGCCGGACGCCTG
CCCGATCATTTCCAAGACCCCGGTGCCGAACATGTTCTTCAACTGCGGCTGGGGCACAGGCGGCTTCAAGGCCACGCCGG
GCTCGGGTAACGTGTTTGCCGCCAGCCTGGCCAAAGGCGAGATGCATCCGCTGGCCAAACCGTTCTCCATTGACCGTTTC
CACAACGGCGCACTCATCGACGAACACGGCGCTGCAGCCGTAGCCCACTAA

Upstream 100 bases:

>100_bases
ACAACCTCGGTGATGCCGATGTCGAGGCCGACGTCGCCAGCCAGGTCGCCGCCCTGTGCGCCGATTTTCCGGTTTATCGC
TGAGTCAGGAGTAGCCTCAC

Downstream 100 bases:

>100_bases
CAGGAGAACCCGACCATGCTGCATATCTTCTGTCCTCACTGTGGCGAACTGCGCTCCGAAGAGGAATTCCACCCGTCCGG
TCAGGCGCACATCCCGCGCC

Product: sarcosine oxidase, beta subunit, heterotetrameric

Products: NA

Alternate protein names: Sarcosine oxidase subunit B [H]

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MQHYSGFGLLKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNVAVVEKGWLGGGNTARNTTIV
RSNYLWDESAHLYEHAMKLWEGLSQELNYNVMFSQRGVYNLCHTLQDMRDSERRVSANRLNGVDGELLNGQQVAEEIPYL
DCSKNTRYPIIGATVQRRGGVARHDAVAWGFARAADALGVDLIQQTEVIGFRKENGVCIGVETNKGFIGAKRVGVVTAGN
SGHMARLAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDSWVGYGQRGSYPVIEHTIQAI
VEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNMFFNCGWGTGGFKATPGSGNVFAASLAKGEMHPLAKPFSIDRF
HNGALIDEHGAAAVAH

Sequences:

>Translated_416_residues
MQHYSGFGLLKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNVAVVEKGWLGGGNTARNTTIV
RSNYLWDESAHLYEHAMKLWEGLSQELNYNVMFSQRGVYNLCHTLQDMRDSERRVSANRLNGVDGELLNGQQVAEEIPYL
DCSKNTRYPIIGATVQRRGGVARHDAVAWGFARAADALGVDLIQQTEVIGFRKENGVCIGVETNKGFIGAKRVGVVTAGN
SGHMARLAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDSWVGYGQRGSYPVIEHTIQAI
VEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNMFFNCGWGTGGFKATPGSGNVFAASLAKGEMHPLAKPFSIDRF
HNGALIDEHGAAAVAH
>Mature_416_residues
MQHYSGFGLLKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNVAVVEKGWLGGGNTARNTTIV
RSNYLWDESAHLYEHAMKLWEGLSQELNYNVMFSQRGVYNLCHTLQDMRDSERRVSANRLNGVDGELLNGQQVAEEIPYL
DCSKNTRYPIIGATVQRRGGVARHDAVAWGFARAADALGVDLIQQTEVIGFRKENGVCIGVETNKGFIGAKRVGVVTAGN
SGHMARLAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDSWVGYGQRGSYPVIEHTIQAI
VEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNMFFNCGWGTGGFKATPGSGNVFAASLAKGEMHPLAKPFSIDRF
HNGALIDEHGAAAVAH

Specific function: Catalyzes the oxidative demethylation of sarcosine to yield glycine, hydrogen peroxide and 5,10- methylenetetrahydrofolate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the soxB family [H]

Homologues:

Organism=Homo sapiens, GI197927446, Length=395, Percent_Identity=22.5316455696203, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI21361378, Length=395, Percent_Identity=22.5316455696203, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR006278 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.5.3.1 [H]

Molecular weight: Translated: 45352; Mature: 45352

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHYSGFGLLKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEE
AVVEKGWLGGGNTARNTTIVRSNYLWDESAHLYEHAMKLWEGLSQELNYNVMFSQRGVYN
EEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHH
LCHTLQDMRDSERRVSANRLNGVDGELLNGQQVAEEIPYLDCSKNTRYPIIGATVQRRGG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCHHHCCC
VARHDAVAWGFARAADALGVDLIQQTEVIGFRKENGVCIGVETNKGFIGAKRVGVVTAGN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCEEEEEEEEEEEECC
SGHMARLAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDS
CCCEEEHHCEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCHH
WVGYGQRGSYPVIEHTIQAIVEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNMFF
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE
NCGWGTGGFKATPGSGNVFAASLAKGEMHPLAKPFSIDRFHNGALIDEHGAAAVAH
ECCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEECCC
>Mature Secondary Structure
MQHYSGFGLLKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEE
AVVEKGWLGGGNTARNTTIVRSNYLWDESAHLYEHAMKLWEGLSQELNYNVMFSQRGVYN
EEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHH
LCHTLQDMRDSERRVSANRLNGVDGELLNGQQVAEEIPYLDCSKNTRYPIIGATVQRRGG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCHHHCCC
VARHDAVAWGFARAADALGVDLIQQTEVIGFRKENGVCIGVETNKGFIGAKRVGVVTAGN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCEEEEEEEEEEEECC
SGHMARLAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDS
CCCEEEHHCEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCHH
WVGYGQRGSYPVIEHTIQAIVEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNMFF
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE
NCGWGTGGFKATPGSGNVFAASLAKGEMHPLAKPFSIDRFHNGALIDEHGAAAVAH
ECCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7543100; 1939012; 3202887; 7692961 [H]