| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047888
Identifier: 66047888
GI number: 66047888
Start: 5527690
End: 5528820
Strand: Direct
Name: 66047888
Synonym: Psyr_4664
Alternate gene names: NA
Gene position: 5527690-5528820 (Clockwise)
Preceding gene: 66047887
Following gene: 66047889
Centisome position: 90.71
GC content: 57.65
Gene sequence:
>1131_bases ATGTCCGAACATCTCTGGATCTGGCAACAGCCGGACTGGCCGCGCTTCCATTGGCGCGAAGAACGCCTTGCACCGTTGAT ACGAGCGTGCGCCAAGGCTCAAGGTCGCTTGCTGGGTATGAGCGGTGCAGTGGGTGGCGATGCGCAAATGTGCGAGGGCT TGAATGCCCTGCTGCAGAATATCGTCACTTCGTCCGCCATCGAAGGCGAGCGACTGAATGCAGATTCTGTCAGGTCGTCG CTGGCACGCCGCCTGGGGATCGCCGATAACGGCAAGCATAGCCCTCGCAGCGAGGGGTTGGCCGAGCTGATGCTGGACGC CACACGTGGTCATGATCAGCCACTTGACTTGCAACGTCTGTGTACCTGGCATCGCTGGCTGTTCCCGGAAGAGGACAGCT TTGTGTCTGCTCGCATCCTGGTTGGTCAATTGCGTAGCGACGAACCTATGCAAGTGGTCTCAGGGAGACTTGATCGACCC ATCGTGCACTTTGAAGCGCCACCGCGGGCTGGACTTGAGCAACAGCTGGAGGATTTTCTCGACTGGTTTGCCAGCAGTCA AAAGGATCCGACGCTCGATCCATTCGTGCGGGCAGGTATCGCGCATTTCTGGTTTGTAACCCTGCATCCGTTTGATGACG GCAATGGTCGCCTGACTCGGGCCATTACAGACCTGGCGCTGACTCAGGGCGATCAGCAAGCCATACGACTGTTTGCCATG TCCGCCAGCATCCTTGCTGACCGCGCCGGCTATTACCACGTTCTGGAGACCAGTCAGAAAAGCACGACCGATATCACCGA GTGGCTGGAATGGTTCCTGCGCACATTGTTGAAAAGCATTGAAAACGCCTTGGTTCATATAGAACGAGTACTGGGCAAAA CGCGATTTTGGCAATTACATCGCGACAACGGCCTGAGCGCCGAACAGGTCAAGGTGCTGAATCGGCTACTGGATGGCGGC GAGCGTGGCTTTGAAAACGGTCTGAGCGCAGCGCAGTATCAGGCAGTGGCGAAGGTCTCGAAGGCCACCGCTACCCGCCA CTTAAGTGATCTGCTTGCCAAAAACTGCCTGGTTCGCCTGCCCGGTGGAGGCCGCAGCACTCGCTACCAGATCAATCGGC CCTTGCAGTAG
Upstream 100 bases:
>100_bases TCGATGAGCACATCTGGACGGTGAGCCGAATAATCACCACAATCGGCTCACTCCATGAGCCGATTAACTTTTTATTCGGC TCACTGCATAGGCGGATACG
Downstream 100 bases:
>100_bases AGCGCTACGCAGCAGAAGGGACTGCTAGCGCTTCAGACGTGCGCCACTGGTCGCATCGACCGCAGCATCCAGTTCCGCAC CGGACAGAAACTGGCTGTAG
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; Xin-Antitoxin System Toxin Component Fic Family; Filamentation Induced By Camp Protein Fic; Cell Filamentation Protein; Fic Protein Family; Filamentation Induced By CAMP Protein Family Protein; -Like Protein; Homolog; Transcription Regulator
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSEHLWIWQQPDWPRFHWREERLAPLIRACAKAQGRLLGMSGAVGGDAQMCEGLNALLQNIVTSSAIEGERLNADSVRSS LARRLGIADNGKHSPRSEGLAELMLDATRGHDQPLDLQRLCTWHRWLFPEEDSFVSARILVGQLRSDEPMQVVSGRLDRP IVHFEAPPRAGLEQQLEDFLDWFASSQKDPTLDPFVRAGIAHFWFVTLHPFDDGNGRLTRAITDLALTQGDQQAIRLFAM SASILADRAGYYHVLETSQKSTTDITEWLEWFLRTLLKSIENALVHIERVLGKTRFWQLHRDNGLSAEQVKVLNRLLDGG ERGFENGLSAAQYQAVAKVSKATATRHLSDLLAKNCLVRLPGGGRSTRYQINRPLQ
Sequences:
>Translated_376_residues MSEHLWIWQQPDWPRFHWREERLAPLIRACAKAQGRLLGMSGAVGGDAQMCEGLNALLQNIVTSSAIEGERLNADSVRSS LARRLGIADNGKHSPRSEGLAELMLDATRGHDQPLDLQRLCTWHRWLFPEEDSFVSARILVGQLRSDEPMQVVSGRLDRP IVHFEAPPRAGLEQQLEDFLDWFASSQKDPTLDPFVRAGIAHFWFVTLHPFDDGNGRLTRAITDLALTQGDQQAIRLFAM SASILADRAGYYHVLETSQKSTTDITEWLEWFLRTLLKSIENALVHIERVLGKTRFWQLHRDNGLSAEQVKVLNRLLDGG ERGFENGLSAAQYQAVAKVSKATATRHLSDLLAKNCLVRLPGGGRSTRYQINRPLQ >Mature_375_residues SEHLWIWQQPDWPRFHWREERLAPLIRACAKAQGRLLGMSGAVGGDAQMCEGLNALLQNIVTSSAIEGERLNADSVRSSL ARRLGIADNGKHSPRSEGLAELMLDATRGHDQPLDLQRLCTWHRWLFPEEDSFVSARILVGQLRSDEPMQVVSGRLDRPI VHFEAPPRAGLEQQLEDFLDWFASSQKDPTLDPFVRAGIAHFWFVTLHPFDDGNGRLTRAITDLALTQGDQQAIRLFAMS ASILADRAGYYHVLETSQKSTTDITEWLEWFLRTLLKSIENALVHIERVLGKTRFWQLHRDNGLSAEQVKVLNRLLDGGE RGFENGLSAAQYQAVAKVSKATATRHLSDLLAKNCLVRLPGGGRSTRYQINRPLQ
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42357; Mature: 42225
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHLWIWQQPDWPRFHWREERLAPLIRACAKAQGRLLGMSGAVGGDAQMCEGLNALLQN CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHH IVTSSAIEGERLNADSVRSSLARRLGIADNGKHSPRSEGLAELMLDATRGHDQPLDLQRL HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH CTWHRWLFPEEDSFVSARILVGQLRSDEPMQVVSGRLDRPIVHFEAPPRAGLEQQLEDFL HHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHH DWFASSQKDPTLDPFVRAGIAHFWFVTLHPFDDGNGRLTRAITDLALTQGDQQAIRLFAM HHHHCCCCCCCCCHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHH SASILADRAGYYHVLETSQKSTTDITEWLEWFLRTLLKSIENALVHIERVLGKTRFWQLH HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEE RDNGLSAEQVKVLNRLLDGGERGFENGLSAAQYQAVAKVSKATATRHLSDLLAKNCLVRL CCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC PGGGRSTRYQINRPLQ CCCCCCCCEECCCCCC >Mature Secondary Structure SEHLWIWQQPDWPRFHWREERLAPLIRACAKAQGRLLGMSGAVGGDAQMCEGLNALLQN CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHH IVTSSAIEGERLNADSVRSSLARRLGIADNGKHSPRSEGLAELMLDATRGHDQPLDLQRL HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH CTWHRWLFPEEDSFVSARILVGQLRSDEPMQVVSGRLDRPIVHFEAPPRAGLEQQLEDFL HHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHH DWFASSQKDPTLDPFVRAGIAHFWFVTLHPFDDGNGRLTRAITDLALTQGDQQAIRLFAM HHHHCCCCCCCCCHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHH SASILADRAGYYHVLETSQKSTTDITEWLEWFLRTLLKSIENALVHIERVLGKTRFWQLH HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEE RDNGLSAEQVKVLNRLLDGGERGFENGLSAAQYQAVAKVSKATATRHLSDLLAKNCLVRL CCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC PGGGRSTRYQINRPLQ CCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA