| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yeeA [H]
Identifier: 66047889
GI number: 66047889
Start: 5529313
End: 5530389
Strand: Direct
Name: yeeA [H]
Synonym: Psyr_4665
Alternate gene names: 66047889
Gene position: 5529313-5530389 (Clockwise)
Preceding gene: 66047888
Following gene: 66047890
Centisome position: 90.74
GC content: 60.72
Gene sequence:
>1077_bases ATGACGAATTCGCGCTCTGCTTTCATACCCTCCTGGCTTCGCCCTGTTCTGCGTCCCTTGCTGGACCCGTATCGCCGTTA TCGGCATGCGCGGCTGATCCACGCGGCGCGGATTGCGGTGGGCTTGCTGGTGACTATTCTGCTGACCACCGGCCTCAACC TGCCCCATGGCGAGTGGGCGTCGGTGACCATGCTGATCGTGATCGGCGGTTTGCAGCATCACGGCAATATCGGCAAGAAG TCGGTCGAACGGGCCTATGGAACGTTGATCGGTGCCGGCCTCGGTCTGATCGTGGTAGTCCAGCAGGGCTATCTGGAAAT GCCGCTGCTGACCTACGCAATGATGTCGGTGATGTGCGGCTTCTTCGCCTATCACGCCATCGGCAAAGGCGGTTACACCG CGCTGCTGTCGGCGATCACGCTGTTCATCGTTGCCGGTCATGGTTACAACCCGATCAGTGACGGGCTGTGGCGTACCGTC GATATCCTGATTGGTATCGCGCTGGCCCTGGCGTTCTCCTTCGCCCTGCCGCTGTATGCGGTGTTTTCCTGGCGCTACAA CCTGGCCAGCGGTTTGCGTGACTGCGCCAAGGTGTACGGGCGCATCGTGCAGGGCCAGCCGGTTACCGCCGATGAGCATT TGAAACTGACCGCCAGGCTCAACGGCACGATGCTGCAACTGCGCTCTCTGCTGCCGTCGGTGTCCAAGGAAGTGAAGATG TCCATGGTCGAGCTGGACGCCATTCAGGGCCACTTCCGCATGTGCCTGAGCACCCTGGAGATTCTCGCCAATATTCGCCC TGCGAATCTGAATCAGCTTGCTGACGAGACGCTCAAGGCATCGCTGGACGCTGACTACCGCCAGATTCGCCGGCAACTGA TCGGCATGGCCCGCGCCCTGCAAACCGGCGCCACCGAACGTCTGGCACGCACGACCGAAACACCTGAGACACCTGCAGTG AAGGCCGTGATTCCTACCGAGTTGAAGGGCTACCACTTGATGACCCAGCAGTTGGCGCTCAACCTCGACGGCCTGCAGGC GCGTCTGGCCAAGACCGCCAAACGCTGGAAGTTTTAA
Upstream 100 bases:
>100_bases ATCGACATACGCCACCCATCCCCCATCAAAATGTGGCTTACTGCGGACTGCCATCATCCAATCAGGGAATCTCTTCCCTA CCCTCGCGGTCTCTTTACGC
Downstream 100 bases:
>100_bases GGAACCGCCCGTGCCCGATACCCGCCCGCCTGTGCTGGATGAAATCGATCGCCAGCTGATTGCCGCGCTGCAAATCAACG CGCGCGAAAGCGTCGCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTNSRSAFIPSWLRPVLRPLLDPYRRYRHARLIHAARIAVGLLVTILLTTGLNLPHGEWASVTMLIVIGGLQHHGNIGKK SVERAYGTLIGAGLGLIVVVQQGYLEMPLLTYAMMSVMCGFFAYHAIGKGGYTALLSAITLFIVAGHGYNPISDGLWRTV DILIGIALALAFSFALPLYAVFSWRYNLASGLRDCAKVYGRIVQGQPVTADEHLKLTARLNGTMLQLRSLLPSVSKEVKM SMVELDAIQGHFRMCLSTLEILANIRPANLNQLADETLKASLDADYRQIRRQLIGMARALQTGATERLARTTETPETPAV KAVIPTELKGYHLMTQQLALNLDGLQARLAKTAKRWKF
Sequences:
>Translated_358_residues MTNSRSAFIPSWLRPVLRPLLDPYRRYRHARLIHAARIAVGLLVTILLTTGLNLPHGEWASVTMLIVIGGLQHHGNIGKK SVERAYGTLIGAGLGLIVVVQQGYLEMPLLTYAMMSVMCGFFAYHAIGKGGYTALLSAITLFIVAGHGYNPISDGLWRTV DILIGIALALAFSFALPLYAVFSWRYNLASGLRDCAKVYGRIVQGQPVTADEHLKLTARLNGTMLQLRSLLPSVSKEVKM SMVELDAIQGHFRMCLSTLEILANIRPANLNQLADETLKASLDADYRQIRRQLIGMARALQTGATERLARTTETPETPAV KAVIPTELKGYHLMTQQLALNLDGLQARLAKTAKRWKF >Mature_357_residues TNSRSAFIPSWLRPVLRPLLDPYRRYRHARLIHAARIAVGLLVTILLTTGLNLPHGEWASVTMLIVIGGLQHHGNIGKKS VERAYGTLIGAGLGLIVVVQQGYLEMPLLTYAMMSVMCGFFAYHAIGKGGYTALLSAITLFIVAGHGYNPISDGLWRTVD ILIGIALALAFSFALPLYAVFSWRYNLASGLRDCAKVYGRIVQGQPVTADEHLKLTARLNGTMLQLRSLLPSVSKEVKMS MVELDAIQGHFRMCLSTLEILANIRPANLNQLADETLKASLDADYRQIRRQLIGMARALQTGATERLARTTETPETPAVK AVIPTELKGYHLMTQQLALNLDGLQARLAKTAKRWKF
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788318, Length=307, Percent_Identity=29.3159609120521, Blast_Score=122, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 39458; Mature: 39327
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSRSAFIPSWLRPVLRPLLDPYRRYRHARLIHAARIAVGLLVTILLTTGLNLPHGEWA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH SVTMLIVIGGLQHHGNIGKKSVERAYGTLIGAGLGLIVVVQQGYLEMPLLTYAMMSVMCG HHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FFAYHAIGKGGYTALLSAITLFIVAGHGYNPISDGLWRTVDILIGIALALAFSFALPLYA HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFSWRYNLASGLRDCAKVYGRIVQGQPVTADEHLKLTARLNGTMLQLRSLLPSVSKEVKM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHH SMVELDAIQGHFRMCLSTLEILANIRPANLNQLADETLKASLDADYRQIRRQLIGMARAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QTGATERLARTTETPETPAVKAVIPTELKGYHLMTQQLALNLDGLQARLAKTAKRWKF HHCHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNSRSAFIPSWLRPVLRPLLDPYRRYRHARLIHAARIAVGLLVTILLTTGLNLPHGEWA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH SVTMLIVIGGLQHHGNIGKKSVERAYGTLIGAGLGLIVVVQQGYLEMPLLTYAMMSVMCG HHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FFAYHAIGKGGYTALLSAITLFIVAGHGYNPISDGLWRTVDILIGIALALAFSFALPLYA HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFSWRYNLASGLRDCAKVYGRIVQGQPVTADEHLKLTARLNGTMLQLRSLLPSVSKEVKM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHH SMVELDAIQGHFRMCLSTLEILANIRPANLNQLADETLKASLDADYRQIRRQLIGMARAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QTGATERLARTTETPETPAVKAVIPTELKGYHLMTQQLALNLDGLQARLAKTAKRWKF HHCHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]