| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yeaH [C]
Identifier: 66047859
GI number: 66047859
Start: 5492489
End: 5493760
Strand: Direct
Name: yeaH [C]
Synonym: Psyr_4632
Alternate gene names: 66047859
Gene position: 5492489-5493760 (Clockwise)
Preceding gene: 66047858
Following gene: 66047860
Centisome position: 90.13
GC content: 57.0
Gene sequence:
>1272_bases ATGAGCTATGTGATCGACCGACGTCTCAACGGCAAGAACAAGAGCACGGTAAACCGCCAGCGGTTTCTGCGGCGTTACCG TGACCACATCAAGAAGGCAGTGGAGGAAGCGGTCAGCCGACGCTCCATCACTGACATGGAACACGGCGAGCAGATCAGCA TTCCCGGACGTGACATCGACGAACCGGTCCTGCATCACGGTCGCGGCGGCAAGCAGACCGTTGTTCATCCTGGCAACAAG GAGTTCACCACAGGTGAGCACATCGCCCGCCCTCAAGGCGGCGGTGGCGGCAAAGGCCCCGGCAAGGCAGGCAACTCCGG CGAAGGGATGGATGAGTTTTCGTTTCAGATTACTCAGGAAGAATTTCTCGAATTCATGTTCGAAGACCTGGAGCTGCCGA ATCTGGTCAAGCGCAACCTGACCGGCACCGACACCTTCAAGACTGTGCGCGCCGGGATCAGCAACGAGGGCAACCCGTCG CGGATCAACATCATCCGTACGCTGCGCTCGGCACATGCACGCCGCATTGCACTGTCCGGCAGCAGCCGGGCGAAACTCAG GGAAGCGACCGCCGAGCTTGAACGCATGAAGCGCGAAGAGCCGGATAACTTTGGTGACATTCAGGAACTGGAAGTAGAGA TCGACCGACTGAAGGCACGCATTCGTCGTGTGCCCTACCTCGACACCTTCGACCTCAAGTACAACCTGCTGGTCAAGCAA CCCAACCCCAGCTCCAAAGCGGTCATGTTCTGCCTGATGGACGTCTCCGGTTCCATGACCCAGGCGACCAAGGACATCGC CAAGCGCTTCTTCATCCTGCTGTACCTGTTCCTCAAACGTAACTACGACAAGATCGACGTGGTCTTCATTCGTCACCACA CCAGCGCCCGCGAAGTGGACGAGGAAGAGTTTTTCTATTCCCGGGAAACCGGCGGCACCATCGTTTCCAGCGCCTTGAAA CTGATGCAGGAAATCATGGCCGCACGCTACCCGAGCAGTGACTGGAATATCTACGCGGCACAAGCGTCGGATGGCGACAA CTGGAACGATGATTCGCCCATCTGCCGGGAAATCCTCACCAAACAGATCATGCCCTTCGTGCAGTACTACACGTACGTGG AAATCACGCCGCGTGAGCATCAGGCCTTGTGGTATGAATACGAACGCATCGGTGAAGATTTTGCCGACACGTTTGCCCAG CAACAGCTGGTCTCTGCCGGTGATATCTACCCGGTATTCCGCGAACTCTTTCAGCGAAGGTTAGTGTCATGA
Upstream 100 bases:
>100_bases TATCAGCTGCAGGCGAAAAGCGATCACCACCCGGGCTCGGGATTGATCGCGGCTCGCCTGCAGCTTGAGGCTTACAACTT GAAGCTCCCCGGAGGAGCCT
Downstream 100 bases:
>100_bases CCGCCAGAGAGCAGAAGCGCCAACCCCTCTCCACGGGGTCAGAGTGGACATTCGAACTGATCCGCGCCTACGACCGCGAA ATCGGCAGGATTGCCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MSYVIDRRLNGKNKSTVNRQRFLRRYRDHIKKAVEEAVSRRSITDMEHGEQISIPGRDIDEPVLHHGRGGKQTVVHPGNK EFTTGEHIARPQGGGGGKGPGKAGNSGEGMDEFSFQITQEEFLEFMFEDLELPNLVKRNLTGTDTFKTVRAGISNEGNPS RINIIRTLRSAHARRIALSGSSRAKLREATAELERMKREEPDNFGDIQELEVEIDRLKARIRRVPYLDTFDLKYNLLVKQ PNPSSKAVMFCLMDVSGSMTQATKDIAKRFFILLYLFLKRNYDKIDVVFIRHHTSAREVDEEEFFYSRETGGTIVSSALK LMQEIMAARYPSSDWNIYAAQASDGDNWNDDSPICREILTKQIMPFVQYYTYVEITPREHQALWYEYERIGEDFADTFAQ QQLVSAGDIYPVFRELFQRRLVS
Sequences:
>Translated_423_residues MSYVIDRRLNGKNKSTVNRQRFLRRYRDHIKKAVEEAVSRRSITDMEHGEQISIPGRDIDEPVLHHGRGGKQTVVHPGNK EFTTGEHIARPQGGGGGKGPGKAGNSGEGMDEFSFQITQEEFLEFMFEDLELPNLVKRNLTGTDTFKTVRAGISNEGNPS RINIIRTLRSAHARRIALSGSSRAKLREATAELERMKREEPDNFGDIQELEVEIDRLKARIRRVPYLDTFDLKYNLLVKQ PNPSSKAVMFCLMDVSGSMTQATKDIAKRFFILLYLFLKRNYDKIDVVFIRHHTSAREVDEEEFFYSRETGGTIVSSALK LMQEIMAARYPSSDWNIYAAQASDGDNWNDDSPICREILTKQIMPFVQYYTYVEITPREHQALWYEYERIGEDFADTFAQ QQLVSAGDIYPVFRELFQRRLVS >Mature_422_residues SYVIDRRLNGKNKSTVNRQRFLRRYRDHIKKAVEEAVSRRSITDMEHGEQISIPGRDIDEPVLHHGRGGKQTVVHPGNKE FTTGEHIARPQGGGGGKGPGKAGNSGEGMDEFSFQITQEEFLEFMFEDLELPNLVKRNLTGTDTFKTVRAGISNEGNPSR INIIRTLRSAHARRIALSGSSRAKLREATAELERMKREEPDNFGDIQELEVEIDRLKARIRRVPYLDTFDLKYNLLVKQP NPSSKAVMFCLMDVSGSMTQATKDIAKRFFILLYLFLKRNYDKIDVVFIRHHTSAREVDEEEFFYSRETGGTIVSSALKL MQEIMAARYPSSDWNIYAAQASDGDNWNDDSPICREILTKQIMPFVQYYTYVEITPREHQALWYEYERIGEDFADTFAQQ QLVSAGDIYPVFRELFQRRLVS
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=422, Percent_Identity=56.1611374407583, Blast_Score=482, Evalue=1e-137,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 48670; Mature: 48538
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVIDRRLNGKNKSTVNRQRFLRRYRDHIKKAVEEAVSRRSITDMEHGEQISIPGRDID CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCC EPVLHHGRGGKQTVVHPGNKEFTTGEHIARPQGGGGGKGPGKAGNSGEGMDEFSFQITQE HHHHHCCCCCCEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECHH EFLEFMFEDLELPNLVKRNLTGTDTFKTVRAGISNEGNPSRINIIRTLRSAHARRIALSG HHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEECC SSRAKLREATAELERMKREEPDNFGDIQELEVEIDRLKARIRRVPYLDTFDLKYNLLVKQ CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEEC PNPSSKAVMFCLMDVSGSMTQATKDIAKRFFILLYLFLKRNYDKIDVVFIRHHTSAREVD CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHCC EEEFFYSRETGGTIVSSALKLMQEIMAARYPSSDWNIYAAQASDGDNWNDDSPICREILT HHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH KQIMPFVQYYTYVEITPREHQALWYEYERIGEDFADTFAQQQLVSAGDIYPVFRELFQRR HHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LVS CCC >Mature Secondary Structure SYVIDRRLNGKNKSTVNRQRFLRRYRDHIKKAVEEAVSRRSITDMEHGEQISIPGRDID CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCC EPVLHHGRGGKQTVVHPGNKEFTTGEHIARPQGGGGGKGPGKAGNSGEGMDEFSFQITQE HHHHHCCCCCCEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECHH EFLEFMFEDLELPNLVKRNLTGTDTFKTVRAGISNEGNPSRINIIRTLRSAHARRIALSG HHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEECC SSRAKLREATAELERMKREEPDNFGDIQELEVEIDRLKARIRRVPYLDTFDLKYNLLVKQ CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEEC PNPSSKAVMFCLMDVSGSMTQATKDIAKRFFILLYLFLKRNYDKIDVVFIRHHTSAREVD CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHCC EEEFFYSRETGGTIVSSALKLMQEIMAARYPSSDWNIYAAQASDGDNWNDDSPICREILT HHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH KQIMPFVQYYTYVEITPREHQALWYEYERIGEDFADTFAQQQLVSAGDIYPVFRELFQRR HHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LVS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA