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The map label for this gene is ugpE [H]

Identifier: 66047731

GI number: 66047731

Start: 5368344

End: 5369237

Strand: Direct

Name: ugpE [H]

Synonym: Psyr_4504

Alternate gene names: 66047731

Gene position: 5368344-5369237 (Clockwise)

Preceding gene: 66047730

Following gene: 66047732

Centisome position: 88.1

GC content: 63.31

Gene sequence:

>894_bases
ATGATCGAGCATAACCGGCTGTTCAACGCAGGCGCTTACCTGCTGCTGACCCTTGGCCTGGTGTTCGCGTTGGGGCCGCT
GTACATAGCGGTCTGCTCGGCGACCGTCAGTAACCCGCAATTGTTCGCCCACGGTCTTGCGGTGATCCCTGGCGACCAAC
TGTTGGAGAATCTGCAGCGGGTCAGTCGGCGTCTGGATCTGCTGCGCCTGCTGGGCAACAGCCTGCTGGTCGCCACGCTG
GTGGTGATCGGCAAGCTGGCGCTCTCGGCGCTGACGGCCTTTGCCGTGGTGTACTTTCGCAGCCGCTACAGTTCGGTGAT
GTTCTTCGCCGTGCTGGGGGCGCTGCTGCTGCCGCTGGAAGTACGGATCATCCCCACGTATGCCGTGGCCAGCGATCTGC
TCGGCCCCGTGCGCAGCCTGTTGCACTGGCTGGGCATTCAGTGGCTGCCACTGCCGACCATCAATTTGCTCGACAGCTAC
CCCGGCCTCGCCCTGCCGCTGATTGCCTCGGCGACCGGCACCTTTCTGTTTCGGCAGTTCTACCAGACGCTGCCTGCCGA
GCTGGTCGAGGCCGCACGCATGGACGGTGCAGGGCCCTGGCGGTTTTTCATCGACATCCTGCTGCCACTGTCGAAGACCA
ACTTTGCTGCGCTCGGCACGCTGGTGTTCATCGGCGCCTGGAAGGACTACCTGTGGCCGCTGGTGGCAACCAATCGCGAG
GACATGCGCACGCTGGTACTGGGCGTGGCCAGCTTTCTGCCGACCGATGCAACCCAGGTCCCCGAGTGGAACCTGCTGAT
GGCCGCTGCTGTGGTCAGCATGCTGCCGCCCATCCTCGTCATTGCGCTCATGCAGCGCTGGTTTGTCAAAGGCCTGATCG
GAGTCGGTAAATGA

Upstream 100 bases:

>100_bases
GCTCATCGACCCTGTCAGTGCTCATGCTGCTGGCGGTGGTGGCGCTGAGCGTCGCCCAATTCACACTCCTGTCGCGCTTC
CAGCGTCGTGGGGTGAAAGC

Downstream 100 bases:

>100_bases
ACGCGCTCACCCCTATTACCTGCGCGCCGGATATTATCCTCACGGACCTGCACAAAACCTACGGCACCGAGCCCATCCTT
CACGGGCTCGACCTGGTTTT

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MIEHNRLFNAGAYLLLTLGLVFALGPLYIAVCSATVSNPQLFAHGLAVIPGDQLLENLQRVSRRLDLLRLLGNSLLVATL
VVIGKLALSALTAFAVVYFRSRYSSVMFFAVLGALLLPLEVRIIPTYAVASDLLGPVRSLLHWLGIQWLPLPTINLLDSY
PGLALPLIASATGTFLFRQFYQTLPAELVEAARMDGAGPWRFFIDILLPLSKTNFAALGTLVFIGAWKDYLWPLVATNRE
DMRTLVLGVASFLPTDATQVPEWNLLMAAAVVSMLPPILVIALMQRWFVKGLIGVGK

Sequences:

>Translated_297_residues
MIEHNRLFNAGAYLLLTLGLVFALGPLYIAVCSATVSNPQLFAHGLAVIPGDQLLENLQRVSRRLDLLRLLGNSLLVATL
VVIGKLALSALTAFAVVYFRSRYSSVMFFAVLGALLLPLEVRIIPTYAVASDLLGPVRSLLHWLGIQWLPLPTINLLDSY
PGLALPLIASATGTFLFRQFYQTLPAELVEAARMDGAGPWRFFIDILLPLSKTNFAALGTLVFIGAWKDYLWPLVATNRE
DMRTLVLGVASFLPTDATQVPEWNLLMAAAVVSMLPPILVIALMQRWFVKGLIGVGK
>Mature_297_residues
MIEHNRLFNAGAYLLLTLGLVFALGPLYIAVCSATVSNPQLFAHGLAVIPGDQLLENLQRVSRRLDLLRLLGNSLLVATL
VVIGKLALSALTAFAVVYFRSRYSSVMFFAVLGALLLPLEVRIIPTYAVASDLLGPVRSLLHWLGIQWLPLPTINLLDSY
PGLALPLIASATGTFLFRQFYQTLPAELVEAARMDGAGPWRFFIDILLPLSKTNFAALGTLVFIGAWKDYLWPLVATNRE
DMRTLVLGVASFLPTDATQVPEWNLLMAAAVVSMLPPILVIALMQRWFVKGLIGVGK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=303, Percent_Identity=40.9240924092409, Blast_Score=224, Evalue=7e-60,
Organism=Escherichia coli, GI1790464, Length=229, Percent_Identity=30.1310043668122, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787571, Length=127, Percent_Identity=29.9212598425197, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32512; Mature: 32512

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEHNRLFNAGAYLLLTLGLVFALGPLYIAVCSATVSNPQLFAHGLAVIPGDQLLENLQR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHH
VSRRLDLLRLLGNSLLVATLVVIGKLALSALTAFAVVYFRSRYSSVMFFAVLGALLLPLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRIIPTYAVASDLLGPVRSLLHWLGIQWLPLPTINLLDSYPGLALPLIASATGTFLFRQF
HEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YQTLPAELVEAARMDGAGPWRFFIDILLPLSKTNFAALGTLVFIGAWKDYLWPLVATNRE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
DMRTLVLGVASFLPTDATQVPEWNLLMAAAVVSMLPPILVIALMQRWFVKGLIGVGK
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEHNRLFNAGAYLLLTLGLVFALGPLYIAVCSATVSNPQLFAHGLAVIPGDQLLENLQR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHH
VSRRLDLLRLLGNSLLVATLVVIGKLALSALTAFAVVYFRSRYSSVMFFAVLGALLLPLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRIIPTYAVASDLLGPVRSLLHWLGIQWLPLPTINLLDSYPGLALPLIASATGTFLFRQF
HEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YQTLPAELVEAARMDGAGPWRFFIDILLPLSKTNFAALGTLVFIGAWKDYLWPLVATNRE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
DMRTLVLGVASFLPTDATQVPEWNLLMAAAVVSMLPPILVIALMQRWFVKGLIGVGK
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]