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The map label for this gene is ugpA [H]

Identifier: 66047730

GI number: 66047730

Start: 5367454

End: 5368347

Strand: Direct

Name: ugpA [H]

Synonym: Psyr_4503

Alternate gene names: 66047730

Gene position: 5367454-5368347 (Clockwise)

Preceding gene: 66047729

Following gene: 66047731

Centisome position: 88.08

GC content: 60.4

Gene sequence:

>894_bases
ATGAAACCCCGTGCTCATTTCCCACAGCCACGTCTGGCGCTGCTGTTTGCCCTGCCGCAACTGCTGGCGCTCGGCCTGTT
CTTTTATTGGCCTGCGGTCCAGGCCATCTGGTGGTCGTTTCATCTGGTGCCGCCCTTCGGCGGTAATGAAATCTTCGTTG
GCCTGAGCAATTACTGGCGGGTGCTGAGGGACCCAGGCGTGCTGGCGTCGCTGGGCTCGACACTGGTGTTCAGCTTGTCG
AGCGTCGTGCTTTCGGTCCTTATCGCACTGGTGCTTGCGCTGTGCCTGGAACTGAAACTGCGCGGCAACGCCGTGGTTCG
CAACCTGCTGATCTGGCCCTACGCGGTATCGGGCGCCACCATCGGTATCGTCTTTCATGTGCTGGCCAATCCGGTGATGG
GCATCTTCGCCTGGCTCAACGCGATTGCACCCGGCACCTGGGCGCCCTACGCCAGCCCGATACAGAGCATGCTGTTGTTG
ATTGTGGCGTATGCCTGGTGTCTGGTGCCGTTCAACTTCGTGATGCTGGTCGCCAGCCTGAAATCGGTGCCCGACGACTA
CCTCGCCGCTGCTGCACTGGATGGAGCAGGTCCCTTGCGGCGCATGCTCGACATACAACTGCCCCTGATCGCGCCTTATC
TGCTGTTCGTGTTTGTCATCGACCTGCTGGAAAGCCTGTCGAACAGTTTCGGCCTGGTCGACACCCTCACCCAAGGCGGA
CCTGGCGATACTACCAATGTGCTGGCCTACAAGATTTACACCGACGGTTTCATGGGGCTGGATCTGGCAGGCTCATCGAC
CCTGTCAGTGCTCATGCTGCTGGCGGTGGTGGCGCTGAGCGTCGCCCAATTCACACTCCTGTCGCGCTTCCAGCGTCGTG
GGGTGAAAGCATGA

Upstream 100 bases:

>100_bases
TGGCCCTGCGCCAGACGACGCTACGGGCCAACGAGCTGCTGGGTCTGTTTCAACAGATGCACCGCGCCCAGGCCAGCAAC
GAGTCGAGCGAGGCCACGCC

Downstream 100 bases:

>100_bases
TCGAGCATAACCGGCTGTTCAACGCAGGCGCTTACCTGCTGCTGACCCTTGGCCTGGTGTTCGCGTTGGGGCCGCTGTAC
ATAGCGGTCTGCTCGGCGAC

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKPRAHFPQPRLALLFALPQLLALGLFFYWPAVQAIWWSFHLVPPFGGNEIFVGLSNYWRVLRDPGVLASLGSTLVFSLS
SVVLSVLIALVLALCLELKLRGNAVVRNLLIWPYAVSGATIGIVFHVLANPVMGIFAWLNAIAPGTWAPYASPIQSMLLL
IVAYAWCLVPFNFVMLVASLKSVPDDYLAAAALDGAGPLRRMLDIQLPLIAPYLLFVFVIDLLESLSNSFGLVDTLTQGG
PGDTTNVLAYKIYTDGFMGLDLAGSSTLSVLMLLAVVALSVAQFTLLSRFQRRGVKA

Sequences:

>Translated_297_residues
MKPRAHFPQPRLALLFALPQLLALGLFFYWPAVQAIWWSFHLVPPFGGNEIFVGLSNYWRVLRDPGVLASLGSTLVFSLS
SVVLSVLIALVLALCLELKLRGNAVVRNLLIWPYAVSGATIGIVFHVLANPVMGIFAWLNAIAPGTWAPYASPIQSMLLL
IVAYAWCLVPFNFVMLVASLKSVPDDYLAAAALDGAGPLRRMLDIQLPLIAPYLLFVFVIDLLESLSNSFGLVDTLTQGG
PGDTTNVLAYKIYTDGFMGLDLAGSSTLSVLMLLAVVALSVAQFTLLSRFQRRGVKA
>Mature_297_residues
MKPRAHFPQPRLALLFALPQLLALGLFFYWPAVQAIWWSFHLVPPFGGNEIFVGLSNYWRVLRDPGVLASLGSTLVFSLS
SVVLSVLIALVLALCLELKLRGNAVVRNLLIWPYAVSGATIGIVFHVLANPVMGIFAWLNAIAPGTWAPYASPIQSMLLL
IVAYAWCLVPFNFVMLVASLKSVPDDYLAAAALDGAGPLRRMLDIQLPLIAPYLLFVFVIDLLESLSNSFGLVDTLTQGG
PGDTTNVLAYKIYTDGFMGLDLAGSSTLSVLMLLAVVALSVAQFTLLSRFQRRGVKA

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=291, Percent_Identity=37.4570446735395, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1790465, Length=266, Percent_Identity=33.0827067669173, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787570, Length=255, Percent_Identity=27.0588235294118, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32235; Mature: 32235

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRAHFPQPRLALLFALPQLLALGLFFYWPAVQAIWWSFHLVPPFGGNEIFVGLSNYWR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEHHHHHH
VLRDPGVLASLGSTLVFSLSSVVLSVLIALVLALCLELKLRGNAVVRNLLIWPYAVSGAT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
IGIVFHVLANPVMGIFAWLNAIAPGTWAPYASPIQSMLLLIVAYAWCLVPFNFVMLVASL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSVPDDYLAAAALDGAGPLRRMLDIQLPLIAPYLLFVFVIDLLESLSNSFGLVDTLTQGG
HHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
PGDTTNVLAYKIYTDGFMGLDLAGSSTLSVLMLLAVVALSVAQFTLLSRFQRRGVKA
CCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKPRAHFPQPRLALLFALPQLLALGLFFYWPAVQAIWWSFHLVPPFGGNEIFVGLSNYWR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEHHHHHH
VLRDPGVLASLGSTLVFSLSSVVLSVLIALVLALCLELKLRGNAVVRNLLIWPYAVSGAT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
IGIVFHVLANPVMGIFAWLNAIAPGTWAPYASPIQSMLLLIVAYAWCLVPFNFVMLVASL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSVPDDYLAAAALDGAGPLRRMLDIQLPLIAPYLLFVFVIDLLESLSNSFGLVDTLTQGG
HHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
PGDTTNVLAYKIYTDGFMGLDLAGSSTLSVLMLLAVVALSVAQFTLLSRFQRRGVKA
CCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA