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The map label for this gene is ychE [C]

Identifier: 66047636

GI number: 66047636

Start: 5273741

End: 5274337

Strand: Direct

Name: ychE [C]

Synonym: Psyr_4409

Alternate gene names: 66047636

Gene position: 5273741-5274337 (Clockwise)

Preceding gene: 66047635

Following gene: 66047645

Centisome position: 86.54

GC content: 58.63

Gene sequence:

>597_bases
ATGCTTCACGTGTTGTTCAGCGTCTATCTGAAAATGCTGGTGCTTTACAGCCCGTTTTTCGTTCTTTCCTGCTTCATCAG
CCTCACGCGTGGTCACTCGCGCAAGGAACAGCGACGCCTGGCCTGGAAGGTGGCACTGGCGACACTGGTTTCCAGCGTAT
TGCTCTATCTGTTCGGACGCGTGATTTTCGATGTATTCGGCATCACCGTGGATGCGTTCCGGATTGGTGCCGGCAGCGTG
CTGTTCATATCGGCACTGGGCATGGCCCAGGGCAAGTCGGCGGTGCAGACCGACAATATCCAGCAGGATGTGACCATCGT
TCCTTTGACCATCCCGCTTACCGTCGGCCCCGGCACGATCGGTGCGCTGCTGGTCATGGGCGTCAGTCAGCCCCACTGGG
ACGACAAACTCACCGCCATCCTGAGTATTGCGCTGGCCAGCCTGACCGTAGGCGTCGTGCTTTACCTCTCCAACCGTATC
GAACGAATCCTCGGCGATCAGGGTTTGCAGATTGTCAGCCGCTTGATGGGGTTGTTCGTCTGTGCGCTGGCCGCGCAAAT
CATCGTCACCGGCATCCGGGGCTACCTGCTGCCCTGA

Upstream 100 bases:

>100_bases
CTCGGACGGCGAGCACTATCGGCAAAACTGACAGCGACGGGAAAGGCCTGTGGCCTGATAGACTGGCGATGCCATCCACC
TGCTGCTGTGAGTCGAAGCC

Downstream 100 bases:

>100_bases
CCGGATTCAGATACTTGCAGCGCGCACCAGCCCCTGCGCCCTGCCGTCCAGATAATCCATCACCTCGTCACGGTGTGCTG
CATACGCCTTAGTGTCAAAC

Product: multiple antibiotic resistance (MarC)-related proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLHVLFSVYLKMLVLYSPFFVLSCFISLTRGHSRKEQRRLAWKVALATLVSSVLLYLFGRVIFDVFGITVDAFRIGAGSV
LFISALGMAQGKSAVQTDNIQQDVTIVPLTIPLTVGPGTIGALLVMGVSQPHWDDKLTAILSIALASLTVGVVLYLSNRI
ERILGDQGLQIVSRLMGLFVCALAAQIIVTGIRGYLLP

Sequences:

>Translated_198_residues
MLHVLFSVYLKMLVLYSPFFVLSCFISLTRGHSRKEQRRLAWKVALATLVSSVLLYLFGRVIFDVFGITVDAFRIGAGSV
LFISALGMAQGKSAVQTDNIQQDVTIVPLTIPLTVGPGTIGALLVMGVSQPHWDDKLTAILSIALASLTVGVVLYLSNRI
ERILGDQGLQIVSRLMGLFVCALAAQIIVTGIRGYLLP
>Mature_198_residues
MLHVLFSVYLKMLVLYSPFFVLSCFISLTRGHSRKEQRRLAWKVALATLVSSVLLYLFGRVIFDVFGITVDAFRIGAGSV
LFISALGMAQGKSAVQTDNIQQDVTIVPLTIPLTVGPGTIGALLVMGVSQPHWDDKLTAILSIALASLTVGVVLYLSNRI
ERILGDQGLQIVSRLMGLFVCALAAQIIVTGIRGYLLP

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=199, Percent_Identity=27.1356783919598, Blast_Score=87, Evalue=5e-19,
Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=25.7731958762887, Blast_Score=67, Evalue=6e-13,
Organism=Escherichia coli, GI1789842, Length=200, Percent_Identity=26.5, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21462; Mature: 21462

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHVLFSVYLKMLVLYSPFFVLSCFISLTRGHSRKEQRRLAWKVALATLVSSVLLYLFGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFDVFGITVDAFRIGAGSVLFISALGMAQGKSAVQTDNIQQDVTIVPLTIPLTVGPGTI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEEEEEEECCHHH
GALLVMGVSQPHWDDKLTAILSIALASLTVGVVLYLSNRIERILGDQGLQIVSRLMGLFV
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
CALAAQIIVTGIRGYLLP
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLHVLFSVYLKMLVLYSPFFVLSCFISLTRGHSRKEQRRLAWKVALATLVSSVLLYLFGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFDVFGITVDAFRIGAGSVLFISALGMAQGKSAVQTDNIQQDVTIVPLTIPLTVGPGTI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEEEEEEECCHHH
GALLVMGVSQPHWDDKLTAILSIALASLTVGVVLYLSNRIERILGDQGLQIVSRLMGLFV
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
CALAAQIIVTGIRGYLLP
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]