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The map label for this gene is 66047622

Identifier: 66047622

GI number: 66047622

Start: 5257326

End: 5258210

Strand: Direct

Name: 66047622

Synonym: Psyr_4395

Alternate gene names: NA

Gene position: 5257326-5258210 (Clockwise)

Preceding gene: 66047621

Following gene: 66047623

Centisome position: 86.27

GC content: 59.55

Gene sequence:

>885_bases
ATGGAACTGTTATTCGCCGCCATGATGCTTGCCGCTGCCGCATTTCTGCTGTTGTCAGGCATAGCCCGTCAACGTAGTAA
TGAACGCCTGGTGGCCAGACGCTTGAGGGGCCAGGTGATCCGCGAGAGCCGCATCGGCAGCCTGTTGCGGTTGCTCGGCG
ATACGCGCATTGGGCAGCGCAGTATCAGCCTGGATTCGGAAACCCAGATACTGCTCAACCGCATCGGCTGGCGGCGCGCC
AGCAAACGCTCGTTATTCGCGGCCTGCCAGGTCGGCGTCCCGGTCGGCCTGATGGTCATTGTCATCCTCGGCCAACTGCT
GTTTTTCAAAGGCATCCAGCAACCGCTCATCGCGCCGATCTTTGCCCTGGGCGCCGGCTATCTGCTGCCCAAGCGGATCC
TGGCAGCCGTGGCTCGACGCCGTCAGAAACAAGTGGTGGTGGAAATCTCTACCTTTATCCCTTTGCTGCGCATCCTGTTC
GAGTCCGGCATGGCGGTCGAGCAGGCGCTTCGGGTGCTCAGCAACGAAGGCAAAGACTTGTTGCCGGTGCTGTCCGAGGA
AATCCGCGTGGTGCTGATGCGCGTTGATTCCGGCCTGGAACTGGGCGAAGAACTGAGAAAAACCGCAGCCCTGCTGGACG
TCGACGAGCTGAGCGACACCTGTGTGATCCTCAATCAACTGATTCATCAGGGCGGTGGCGCATTGAAGTCCCTGCTCACG
CTCAAGCAACTGATCGACGACCGACGCCTGACCCGCCTGCAGGAATACATTTCCAAACTCTCGGCAAAAATGTCGGTGGT
CATGATGGTGTTTCTGTTCCCCGCCCTGCTGATTGTGCTGGCCGGGCCCGGATTTATGGCAATAAGCCGCGCACTGGGCA
GTTGA

Upstream 100 bases:

>100_bases
ATGTGGGACGACGAAAGCGGCAAGATCATGCTGAGCGTGGCCTTCGCCCTGCAGGTCACGGGGTGCGTGGTGTTGTGGCG
CATGTTGAGGAGCATTTGAG

Downstream 100 bases:

>100_bases
CCCGGTATTACCTGTGCACGAAAGGACGCATTGCAATGAAACCAGTGATCGTACTACTCGGGCTGCTGTTGCTGGGCGGA
TGCGCCAGTGATGGTCGCCC

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System Protein F Subunit; Type II Secretion System; Type II Secretion System Protein F Domain; Type II Secretion System F Domain Protein; Type II Secretion System F Domain-Containing Protein; TadC Protein; Tight Adherence TadC Related Transmembrane Protein; Type II Secretion System Protein Transmembrane; Flp Pilus Assembly Protein; Transmembrane Type II Secretion Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Bacterial Type II Secretion System Protein F Domain

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MELLFAAMMLAAAAFLLLSGIARQRSNERLVARRLRGQVIRESRIGSLLRLLGDTRIGQRSISLDSETQILLNRIGWRRA
SKRSLFAACQVGVPVGLMVIVILGQLLFFKGIQQPLIAPIFALGAGYLLPKRILAAVARRRQKQVVVEISTFIPLLRILF
ESGMAVEQALRVLSNEGKDLLPVLSEEIRVVLMRVDSGLELGEELRKTAALLDVDELSDTCVILNQLIHQGGGALKSLLT
LKQLIDDRRLTRLQEYISKLSAKMSVVMMVFLFPALLIVLAGPGFMAISRALGS

Sequences:

>Translated_294_residues
MELLFAAMMLAAAAFLLLSGIARQRSNERLVARRLRGQVIRESRIGSLLRLLGDTRIGQRSISLDSETQILLNRIGWRRA
SKRSLFAACQVGVPVGLMVIVILGQLLFFKGIQQPLIAPIFALGAGYLLPKRILAAVARRRQKQVVVEISTFIPLLRILF
ESGMAVEQALRVLSNEGKDLLPVLSEEIRVVLMRVDSGLELGEELRKTAALLDVDELSDTCVILNQLIHQGGGALKSLLT
LKQLIDDRRLTRLQEYISKLSAKMSVVMMVFLFPALLIVLAGPGFMAISRALGS
>Mature_294_residues
MELLFAAMMLAAAAFLLLSGIARQRSNERLVARRLRGQVIRESRIGSLLRLLGDTRIGQRSISLDSETQILLNRIGWRRA
SKRSLFAACQVGVPVGLMVIVILGQLLFFKGIQQPLIAPIFALGAGYLLPKRILAAVARRRQKQVVVEISTFIPLLRILF
ESGMAVEQALRVLSNEGKDLLPVLSEEIRVVLMRVDSGLELGEELRKTAALLDVDELSDTCVILNQLIHQGGGALKSLLT
LKQLIDDRRLTRLQEYISKLSAKMSVVMMVFLFPALLIVLAGPGFMAISRALGS

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32406; Mature: 32406

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLFAAMMLAAAAFLLLSGIARQRSNERLVARRLRGQVIRESRIGSLLRLLGDTRIGQR
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
SISLDSETQILLNRIGWRRASKRSLFAACQVGVPVGLMVIVILGQLLFFKGIQQPLIAPI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
FALGAGYLLPKRILAAVARRRQKQVVVEISTFIPLLRILFESGMAVEQALRVLSNEGKDL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH
LPVLSEEIRVVLMRVDSGLELGEELRKTAALLDVDELSDTCVILNQLIHQGGGALKSLLT
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LKQLIDDRRLTRLQEYISKLSAKMSVVMMVFLFPALLIVLAGPGFMAISRALGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MELLFAAMMLAAAAFLLLSGIARQRSNERLVARRLRGQVIRESRIGSLLRLLGDTRIGQR
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
SISLDSETQILLNRIGWRRASKRSLFAACQVGVPVGLMVIVILGQLLFFKGIQQPLIAPI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
FALGAGYLLPKRILAAVARRRQKQVVVEISTFIPLLRILFESGMAVEQALRVLSNEGKDL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH
LPVLSEEIRVVLMRVDSGLELGEELRKTAALLDVDELSDTCVILNQLIHQGGGALKSLLT
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LKQLIDDRRLTRLQEYISKLSAKMSVVMMVFLFPALLIVLAGPGFMAISRALGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA