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The map label for this gene is yfcD [C]

Identifier: 66047606

GI number: 66047606

Start: 5235551

End: 5236096

Strand: Direct

Name: yfcD [C]

Synonym: Psyr_4379

Alternate gene names: 66047606

Gene position: 5235551-5236096 (Clockwise)

Preceding gene: 66047605

Following gene: 66047607

Centisome position: 85.92

GC content: 61.17

Gene sequence:

>546_bases
ATGTCCATACCTGCCAACGAGGCCGCGCACCGCGCCGCCTCGGATGCCGAGCAGATCGCCTGGGTCGACGAACAGGATCG
ACTGCTCGGTTCGCTGGTCCGCGCTGACCTGCGTGAACGCGGACTGATCGGACGCGGCACTTATATCCTGCTGTTCAACA
GTCTCGGTGAGCTGTGCGTGCATCGGCGCACCTTGAGCAAGGCGATCTATCCCGGCTACTGGGACGTAGCCGCAGGCGGG
ATGGTCCAGGCCGATGAAAGCTACGCAGCCTCTGCCGCGCGCGAGCTGGAAGAAGAGCTGGGGGTCAGTGGCGTACCGCT
GCAGGCCCACGAACAGTTTTTCTTCGATCAGCCGGGCAACCGGCTCTGGTGTGCAGTGTTTTCAGCCGTATGGGACGGAC
CTTTGAAACTGCAACCTGAAGAGGTCCTGGAGGCGCGCTTCATGCCCATCGCCGAAGTTCTGCAACAGGCTGAGCATAAT
CCCTGGTGCCCCGACTCCCTGGCGGCACTGAAACGCTACCTTAAGCAGATAGAGAATGAGCAGTAA

Upstream 100 bases:

>100_bases
CGTTCGGCGTGTTCGCCAACCACTCGCTGGTCATGGCCAACTACATCTCGCGTGCCAACGCTGCGGTCATCGACCTGCGC
CAGCTGCTGAATCAGGGCTG

Downstream 100 bases:

>100_bases
GCGAGTGTTCAGCAATTGGCACATCCAGCCCCTTAGCAACCGGCCGGTTTGCCGTTACACTGCGCGACCTTTTCAAACTG
GACCGGCCCTGCCGTTTCAG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSIPANEAAHRAASDAEQIAWVDEQDRLLGSLVRADLRERGLIGRGTYILLFNSLGELCVHRRTLSKAIYPGYWDVAAGG
MVQADESYAASAARELEEELGVSGVPLQAHEQFFFDQPGNRLWCAVFSAVWDGPLKLQPEEVLEARFMPIAEVLQQAEHN
PWCPDSLAALKRYLKQIENEQ

Sequences:

>Translated_181_residues
MSIPANEAAHRAASDAEQIAWVDEQDRLLGSLVRADLRERGLIGRGTYILLFNSLGELCVHRRTLSKAIYPGYWDVAAGG
MVQADESYAASAARELEEELGVSGVPLQAHEQFFFDQPGNRLWCAVFSAVWDGPLKLQPEEVLEARFMPIAEVLQQAEHN
PWCPDSLAALKRYLKQIENEQ
>Mature_180_residues
SIPANEAAHRAASDAEQIAWVDEQDRLLGSLVRADLRERGLIGRGTYILLFNSLGELCVHRRTLSKAIYPGYWDVAAGGM
VQADESYAASAARELEEELGVSGVPLQAHEQFFFDQPGNRLWCAVFSAVWDGPLKLQPEEVLEARFMPIAEVLQQAEHNP
WCPDSLAALKRYLKQIENEQ

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788637, Length=167, Percent_Identity=39.5209580838323, Blast_Score=110, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 20223; Mature: 20092

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPANEAAHRAASDAEQIAWVDEQDRLLGSLVRADLRERGLIGRGTYILLFNSLGELCV
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
HRRTLSKAIYPGYWDVAAGGMVQADESYAASAARELEEELGVSGVPLQAHEQFFFDQPGN
HHHHHHHHHCCCCHHHHCCCCEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
RLWCAVFSAVWDGPLKLQPEEVLEARFMPIAEVLQQAEHNPWCPDSLAALKRYLKQIENE
HHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
Q
C
>Mature Secondary Structure 
SIPANEAAHRAASDAEQIAWVDEQDRLLGSLVRADLRERGLIGRGTYILLFNSLGELCV
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
HRRTLSKAIYPGYWDVAAGGMVQADESYAASAARELEEELGVSGVPLQAHEQFFFDQPGN
HHHHHHHHHCCCCHHHHCCCCEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
RLWCAVFSAVWDGPLKLQPEEVLEARFMPIAEVLQQAEHNPWCPDSLAALKRYLKQIENE
HHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]