Click here to switch to the map view.

The map label for this gene is yciH [C]

Identifier: 66047607

GI number: 66047607

Start: 5236285

End: 5236656

Strand: Direct

Name: yciH [C]

Synonym: Psyr_4380

Alternate gene names: 66047607

Gene position: 5236285-5236656 (Clockwise)

Preceding gene: 66047606

Following gene: 66047608

Centisome position: 85.93

GC content: 61.02

Gene sequence:

>372_bases
GTGGCTAAAAAAGCCGCTTCTCTCGCCGCCCTGGGTGGCCTGGTATTTTCAACCGACGCTGGGCGCCACTGCCCCGATTG
TCGTCAACCCGTTGCCGAGTGCACCTGCAAACAGACGGCCATCCCCGAAGGTGACGGCATTGCCCGTGTACGCCGTGAAA
GCAAGGGCCGGGGCGGCAAGACCGTCACCACCATCAGCGGCGTCCCGCTGGCCGAAGAACCGCTCAAAGAGTTGGCCAAG
GCTCTCAAGCAACGCTGCGGCACAGGCGGATCGCTCAAGGAAGGCGTGATCGAGATTCAGGGCGATCACGTCGAACTGCT
GTTGGCAGAGCTGATCAAAAAAGGCTTCAAGGCTAAAAAGTCCGGCGGCTGA

Upstream 100 bases:

>100_bases
CTGCCGTTTCAGTAGCGCTGCCCCTGCCAGAGTGGGGCTTCGCGGTCGATGGCTCGTACGAGCCCGACCCATCTTCAGTC
CTCAACAAGAGGATGTTTGC

Downstream 100 bases:

>100_bases
ACCCGCGAATCAAATCGTCATTTCCACCCATTACAATGCGCGCAGTCAGCTTCAGGCTGGCGCAACGACTTATTTATAGG
GGACTTCGATGTCCGTAAGA

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MAKKAASLAALGGLVFSTDAGRHCPDCRQPVAECTCKQTAIPEGDGIARVRRESKGRGGKTVTTISGVPLAEEPLKELAK
ALKQRCGTGGSLKEGVIEIQGDHVELLLAELIKKGFKAKKSGG

Sequences:

>Translated_123_residues
MAKKAASLAALGGLVFSTDAGRHCPDCRQPVAECTCKQTAIPEGDGIARVRRESKGRGGKTVTTISGVPLAEEPLKELAK
ALKQRCGTGGSLKEGVIEIQGDHVELLLAELIKKGFKAKKSGG
>Mature_122_residues
AKKAASLAALGGLVFSTDAGRHCPDCRQPVAECTCKQTAIPEGDGIARVRRESKGRGGKTVTTISGVPLAEEPLKELAKA
LKQRCGTGGSLKEGVIEIQGDHVELLLAELIKKGFKAKKSGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=110, Percent_Identity=45.4545454545455, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 12797; Mature: 12666

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKAASLAALGGLVFSTDAGRHCPDCRQPVAECTCKQTAIPEGDGIARVRRESKGRGGK
CCCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC
TVTTISGVPLAEEPLKELAKALKQRCGTGGSLKEGVIEIQGDHVELLLAELIKKGFKAKK
EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCC
SGG
CCC
>Mature Secondary Structure 
AKKAASLAALGGLVFSTDAGRHCPDCRQPVAECTCKQTAIPEGDGIARVRRESKGRGGK
CCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC
TVTTISGVPLAEEPLKELAKALKQRCGTGGSLKEGVIEIQGDHVELLLAELIKKGFKAKK
EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCC
SGG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]