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The map label for this gene is nodV [H]

Identifier: 66047600

GI number: 66047600

Start: 5227798

End: 5230521

Strand: Reverse

Name: nodV [H]

Synonym: Psyr_4373

Alternate gene names: 66047600

Gene position: 5230521-5227798 (Counterclockwise)

Preceding gene: 66047601

Following gene: 66047596

Centisome position: 85.83

GC content: 62.48

Gene sequence:

>2724_bases
GTGCCGCAGCCCTTGCCGGTATCGAGCGAGCCCGGTCCGATCGGGGCGGACCTCTATCTGCTGCTGGATGACGAAGGCCG
CATACAAAGCATCAGCCCGCACTTGCTCTCTCGTCTGGACATCGCTGCGCCAGTGCCGGCTGCCCAGCGACTGATGAGCC
TGCTGCTGCCCAACAGCGCGCTGGTTATCGAAGGTGTGCCGCGTGACTGGCTGGGGCACATGCTCGACCTGGACTTCAAG
GGCGACGATGCACACACCTTGCACGCCCGAGGCTGGGTGCAGGCGCATGGCAAGGGCTGGCTCTTGCAATTGCTGGATAT
CAGCGACCTGATGGAGGAAGCCAGTGCCGCGCGCAGCCGCCAGCAGTGCCTGCGGTTTGCCGGGCAGATGGCCGAGCGTG
TGCGAGGGTGCAATGTCGACCGCCTGACTGCCGTGGTGAGCGAGCAGCTTGAGGAACTCGCGCAGCTGTGGCGCATTCCC
TGTGTGGCGCTGGTGTTGCCGGAAGTTGGCGGTGTCGGCTGGCGTGTTTATTGTCAGTACAGCGCTCATACGGCGCCCGA
GTTGTGGCAGGTCGGGCAGCGGCTGGGCACTGCGCTGGATCGATTCAACGTCGATGCCACGCAGCAGCTGAGGTTTGGCG
GCAGTGTCGATGCGGGGGCGCTGCAAAGTATTTTCGGCAACGCTGACGGTTTTCTCATCCCTCACAGCCGCGATAACGTT
GCCAAGGCCTGGCTGATGTTCGGATTTTATAACGCGCAGCAGCAGGCGCCGGACCTTGGCGAGCGCGAGTGGCTTAACCT
CGGCTCAGCCTTGGCCGGGCCGGTGCTTTTTCGAATGTCCGAGCAACATAACCGTCACCATGTCGAGCGCCTGGCGGTGC
TTCAGGACCTGCTGGGCACCGGGTGGTGGGAATTGCTGCCGGATCGTGACGAGGTTCTGCTGGCACCGCAGCTGGCTCGC
AGTCTGCGTCTGGGCGACCGGGTCGAGAGCCTGTCGCGTCAGGACTGGCTGGCACTGATTCATCCCGCCGATCGACAGGA
GCTGTCCAGTCGCCTCGCCCAGTTGCGCGACAAGGGCACGCCGCTGTTGCTCTGTGTACGTCTGGCACAAACCGACCCCG
CTCAGGAAACCCTCTGGTTTCGTATTCAGGGGCAGGCGTTGCACAGGGGGCAGGTGCAGCGGGTATTGGGCTTCATGCTG
GACGTCAGCGATATCAAGAATCAGGAAACCGAGGCCGCCGCCGCCCATGCCCGGCTGGATAACCTGATTGCCAGTTCGCC
CGCCGTGATTTACGTGCAGCGTTATGATCACGGCAATCTGGAACCCACCTTTTTCAGTGACAGCCTCACGCCTTTGCTGG
GCTGGACGCTGGCCGATTGCGTCGACGGGCAACTGGCGGGGTACATCCATCCCGACGACCACGACATCTGGTTCGAGCGT
AATCGCCAACTGCTGCGCGAAGGATTCGTCAGCCGCCGTTTCAGGTTGCGCAACAGGAACGGCCAATACCACTGGCTGCT
GGACGAGGCGCGACTGCTGCGTGACGACCTCGGCATGCCGGTGGAGGCGGTGGGTCTGTGGCTGGATGTGACCGAGGCCA
CCCTGGCCGCCGAGCATATACGGCGTAGCGAGGAGCGTTACCGCATTCTGGTCGAGGATTCGCCGGCCATGATCTGCCGC
TACACGCCGGACCTGGTGTTGAGTTTCGGCAACCGGCCGCTGGCCAAGTATATGGAGTGCACACCCGAGCAACTGACCGG
GATCAACCTGGGAGACTGGCTGTCGGACGAGCAGCGCGAGGCATTCATCAAGCGTATCGGCCAGCTGACTCCGGAAGCGC
CGGTGAGTACCGAAGAAATCTGTATCGAGCTGCCGGGACGCGAGTATGCCTGGTGGATATGGGCCGACCGGGGGGTATTC
GATGAACACGGCAAACTGGTCGAAGTGCAGGCGGTGGGCCGTGACAACACCGATGTACGCCGCTCGCGCATGCAGTTGAA
TCAGAGCGCGAAGATGGCAACGCTTGGCGAGATGTCCACCGGTCTGGCCCACGAGATCAATCAGCCGCTCAACGTCATGC
GCATGGCCGTGGTCAACGTCCTCAAGCGTCTGGGTCGGGGTGATGTGGACATCGAATACCTCACTGAAAAGCTCAATCGC
ATCGACACCCAGGTGCAGCGCGCCGCCCGGGTGGTCGATCATATGCGGGTATTCGGTCGCCGCTCTGAAGTAGAAGAGCA
GCTGTTCGATCCGGCCCAGGCGGTCGAAGGCACGATCTCGATGCTGGCTGAAGGCATGAAAGGCAAGGGCGTGCAGCTGC
GGGTCGGCGGGATGATCGACGCGGTGCGGGTTCGTGGTCATGTCGATCAGCTTGAGCAGGTGCTGATCAACCTGATGGTC
AACGCCCGGGATGCCTTGTTGTCGCGCCGGGAAAAGGACCGGGATTTCGAGCCATGGATCAGTGTCGAGGCCGAGCGCGA
TGAAAATATCATCCGCCTGGCGGTCCAGGACAACGGTGGAGGCATTGATCCGCGGTTGCTGGAGCGCATTTTCGAGCCGT
TTTTCACCACTAAACCGGTAGGTGTCGGCACCGGGCTGGGCTTGTCCGTCAGTTACGGCATCGTCGACCAGATGGGCGGC
CAGCTCAGCGTCGCCAACATCGGCGAGGGCGCTCGCTTCCAGATCGAGCTGCCGATATTCAACGCCGATCAGCCCGGCAG
CTAA

Upstream 100 bases:

>100_bases
CCGCGCCTGCCGAGCAACCTGACTGCACAAGCGAGTCTGCAACTTGTCCCTTGAAAAGAATCGTTTGAGCCGTTGGCTGG
GCCGTGGTGAAGCAACGCAG

Downstream 100 bases:

>100_bases
ATCACCAGCGTCGCCTGACCCAGGTTGCAGCTCAGGTTGGTGCCGACATCGGTAGCCCCCATGCTCACACCCAGTGATTC
GAACAACGGGTCGACGACCG

Product: PAS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 907; Mature: 906

Protein sequence:

>907_residues
MPQPLPVSSEPGPIGADLYLLLDDEGRIQSISPHLLSRLDIAAPVPAAQRLMSLLLPNSALVIEGVPRDWLGHMLDLDFK
GDDAHTLHARGWVQAHGKGWLLQLLDISDLMEEASAARSRQQCLRFAGQMAERVRGCNVDRLTAVVSEQLEELAQLWRIP
CVALVLPEVGGVGWRVYCQYSAHTAPELWQVGQRLGTALDRFNVDATQQLRFGGSVDAGALQSIFGNADGFLIPHSRDNV
AKAWLMFGFYNAQQQAPDLGEREWLNLGSALAGPVLFRMSEQHNRHHVERLAVLQDLLGTGWWELLPDRDEVLLAPQLAR
SLRLGDRVESLSRQDWLALIHPADRQELSSRLAQLRDKGTPLLLCVRLAQTDPAQETLWFRIQGQALHRGQVQRVLGFML
DVSDIKNQETEAAAAHARLDNLIASSPAVIYVQRYDHGNLEPTFFSDSLTPLLGWTLADCVDGQLAGYIHPDDHDIWFER
NRQLLREGFVSRRFRLRNRNGQYHWLLDEARLLRDDLGMPVEAVGLWLDVTEATLAAEHIRRSEERYRILVEDSPAMICR
YTPDLVLSFGNRPLAKYMECTPEQLTGINLGDWLSDEQREAFIKRIGQLTPEAPVSTEEICIELPGREYAWWIWADRGVF
DEHGKLVEVQAVGRDNTDVRRSRMQLNQSAKMATLGEMSTGLAHEINQPLNVMRMAVVNVLKRLGRGDVDIEYLTEKLNR
IDTQVQRAARVVDHMRVFGRRSEVEEQLFDPAQAVEGTISMLAEGMKGKGVQLRVGGMIDAVRVRGHVDQLEQVLINLMV
NARDALLSRREKDRDFEPWISVEAERDENIIRLAVQDNGGGIDPRLLERIFEPFFTTKPVGVGTGLGLSVSYGIVDQMGG
QLSVANIGEGARFQIELPIFNADQPGS

Sequences:

>Translated_907_residues
MPQPLPVSSEPGPIGADLYLLLDDEGRIQSISPHLLSRLDIAAPVPAAQRLMSLLLPNSALVIEGVPRDWLGHMLDLDFK
GDDAHTLHARGWVQAHGKGWLLQLLDISDLMEEASAARSRQQCLRFAGQMAERVRGCNVDRLTAVVSEQLEELAQLWRIP
CVALVLPEVGGVGWRVYCQYSAHTAPELWQVGQRLGTALDRFNVDATQQLRFGGSVDAGALQSIFGNADGFLIPHSRDNV
AKAWLMFGFYNAQQQAPDLGEREWLNLGSALAGPVLFRMSEQHNRHHVERLAVLQDLLGTGWWELLPDRDEVLLAPQLAR
SLRLGDRVESLSRQDWLALIHPADRQELSSRLAQLRDKGTPLLLCVRLAQTDPAQETLWFRIQGQALHRGQVQRVLGFML
DVSDIKNQETEAAAAHARLDNLIASSPAVIYVQRYDHGNLEPTFFSDSLTPLLGWTLADCVDGQLAGYIHPDDHDIWFER
NRQLLREGFVSRRFRLRNRNGQYHWLLDEARLLRDDLGMPVEAVGLWLDVTEATLAAEHIRRSEERYRILVEDSPAMICR
YTPDLVLSFGNRPLAKYMECTPEQLTGINLGDWLSDEQREAFIKRIGQLTPEAPVSTEEICIELPGREYAWWIWADRGVF
DEHGKLVEVQAVGRDNTDVRRSRMQLNQSAKMATLGEMSTGLAHEINQPLNVMRMAVVNVLKRLGRGDVDIEYLTEKLNR
IDTQVQRAARVVDHMRVFGRRSEVEEQLFDPAQAVEGTISMLAEGMKGKGVQLRVGGMIDAVRVRGHVDQLEQVLINLMV
NARDALLSRREKDRDFEPWISVEAERDENIIRLAVQDNGGGIDPRLLERIFEPFFTTKPVGVGTGLGLSVSYGIVDQMGG
QLSVANIGEGARFQIELPIFNADQPGS
>Mature_906_residues
PQPLPVSSEPGPIGADLYLLLDDEGRIQSISPHLLSRLDIAAPVPAAQRLMSLLLPNSALVIEGVPRDWLGHMLDLDFKG
DDAHTLHARGWVQAHGKGWLLQLLDISDLMEEASAARSRQQCLRFAGQMAERVRGCNVDRLTAVVSEQLEELAQLWRIPC
VALVLPEVGGVGWRVYCQYSAHTAPELWQVGQRLGTALDRFNVDATQQLRFGGSVDAGALQSIFGNADGFLIPHSRDNVA
KAWLMFGFYNAQQQAPDLGEREWLNLGSALAGPVLFRMSEQHNRHHVERLAVLQDLLGTGWWELLPDRDEVLLAPQLARS
LRLGDRVESLSRQDWLALIHPADRQELSSRLAQLRDKGTPLLLCVRLAQTDPAQETLWFRIQGQALHRGQVQRVLGFMLD
VSDIKNQETEAAAAHARLDNLIASSPAVIYVQRYDHGNLEPTFFSDSLTPLLGWTLADCVDGQLAGYIHPDDHDIWFERN
RQLLREGFVSRRFRLRNRNGQYHWLLDEARLLRDDLGMPVEAVGLWLDVTEATLAAEHIRRSEERYRILVEDSPAMICRY
TPDLVLSFGNRPLAKYMECTPEQLTGINLGDWLSDEQREAFIKRIGQLTPEAPVSTEEICIELPGREYAWWIWADRGVFD
EHGKLVEVQAVGRDNTDVRRSRMQLNQSAKMATLGEMSTGLAHEINQPLNVMRMAVVNVLKRLGRGDVDIEYLTEKLNRI
DTQVQRAARVVDHMRVFGRRSEVEEQLFDPAQAVEGTISMLAEGMKGKGVQLRVGGMIDAVRVRGHVDQLEQVLINLMVN
ARDALLSRREKDRDFEPWISVEAERDENIIRLAVQDNGGGIDPRLLERIFEPFFTTKPVGVGTGLGLSVSYGIVDQMGGQ
LSVANIGEGARFQIELPIFNADQPGS

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=291, Percent_Identity=30.5841924398625, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI1790436, Length=236, Percent_Identity=28.8135593220339, Blast_Score=93, Evalue=6e-20,
Organism=Escherichia coli, GI87081816, Length=169, Percent_Identity=31.3609467455621, Blast_Score=73, Evalue=9e-14,
Organism=Escherichia coli, GI1790300, Length=337, Percent_Identity=28.486646884273, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 101839; Mature: 101708

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQPLPVSSEPGPIGADLYLLLDDEGRIQSISPHLLSRLDIAAPVPAAQRLMSLLLPNSA
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCE
LVIEGVPRDWLGHMLDLDFKGDDAHTLHARGWVQAHGKGWLLQLLDISDLMEEASAARSR
EEEECCCHHHHHHHEECCCCCCCCCEEEECCEEEECCCCCEEHHHHHHHHHHHHHHHHHH
QQCLRFAGQMAERVRGCNVDRLTAVVSEQLEELAQLWRIPCVALVLPEVGGVGWRVYCQY
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEE
SAHTAPELWQVGQRLGTALDRFNVDATQQLRFGGSVDAGALQSIFGNADGFLIPHSRDNV
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCCHH
AKAWLMFGFYNAQQQAPDLGEREWLNLGSALAGPVLFRMSEQHNRHHVERLAVLQDLLGT
HHHHHHHHHHCCHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GWWELLPDRDEVLLAPQLARSLRLGDRVESLSRQDWLALIHPADRQELSSRLAQLRDKGT
CHHHHCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCC
PLLLCVRLAQTDPAQETLWFRIQGQALHRGQVQRVLGFMLDVSDIKNQETEAAAAHARLD
CEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NLIASSPAVIYVQRYDHGNLEPTFFSDSLTPLLGWTLADCVDGQLAGYIHPDDHDIWFER
HHHCCCCCEEEEEECCCCCCCCCEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
NRQLLREGFVSRRFRLRNRNGQYHWLLDEARLLRDDLGMPVEAVGLWLDVTEATLAAEHI
HHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHHHEEEEHHHHHHHHHHH
RRSEERYRILVEDSPAMICRYTPDLVLSFGNRPLAKYMECTPEQLTGINLGDWLSDEQRE
HCCCCCEEEEEECCCCEEEEECHHHHEECCCCCHHHHHHCCHHHHCCCCCHHCCCCHHHH
AFIKRIGQLTPEAPVSTEEICIELPGREYAWWIWADRGVFDEHGKLVEVQAVGRDNTDVR
HHHHHHHCCCCCCCCCHHHEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHH
RSRMQLNQSAKMATLGEMSTGLAHEINQPLNVMRMAVVNVLKRLGRGDVDIEYLTEKLNR
HHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IDTQVQRAARVVDHMRVFGRRSEVEEQLFDPAQAVEGTISMLAEGMKGKGVQLRVGGMID
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCEE
AVRVRGHVDQLEQVLINLMVNARDALLSRREKDRDFEPWISVEAERDENIIRLAVQDNGG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCC
GIDPRLLERIFEPFFTTKPVGVGTGLGLSVSYGIVDQMGGQLSVANIGEGARFQIELPIF
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHCCCEEEEEECCCCCEEEEEEEEE
NADQPGS
CCCCCCC
>Mature Secondary Structure 
PQPLPVSSEPGPIGADLYLLLDDEGRIQSISPHLLSRLDIAAPVPAAQRLMSLLLPNSA
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCE
LVIEGVPRDWLGHMLDLDFKGDDAHTLHARGWVQAHGKGWLLQLLDISDLMEEASAARSR
EEEECCCHHHHHHHEECCCCCCCCCEEEECCEEEECCCCCEEHHHHHHHHHHHHHHHHHH
QQCLRFAGQMAERVRGCNVDRLTAVVSEQLEELAQLWRIPCVALVLPEVGGVGWRVYCQY
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEE
SAHTAPELWQVGQRLGTALDRFNVDATQQLRFGGSVDAGALQSIFGNADGFLIPHSRDNV
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCCHH
AKAWLMFGFYNAQQQAPDLGEREWLNLGSALAGPVLFRMSEQHNRHHVERLAVLQDLLGT
HHHHHHHHHHCCHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GWWELLPDRDEVLLAPQLARSLRLGDRVESLSRQDWLALIHPADRQELSSRLAQLRDKGT
CHHHHCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCC
PLLLCVRLAQTDPAQETLWFRIQGQALHRGQVQRVLGFMLDVSDIKNQETEAAAAHARLD
CEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NLIASSPAVIYVQRYDHGNLEPTFFSDSLTPLLGWTLADCVDGQLAGYIHPDDHDIWFER
HHHCCCCCEEEEEECCCCCCCCCEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
NRQLLREGFVSRRFRLRNRNGQYHWLLDEARLLRDDLGMPVEAVGLWLDVTEATLAAEHI
HHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHHHEEEEHHHHHHHHHHH
RRSEERYRILVEDSPAMICRYTPDLVLSFGNRPLAKYMECTPEQLTGINLGDWLSDEQRE
HCCCCCEEEEEECCCCEEEEECHHHHEECCCCCHHHHHHCCHHHHCCCCCHHCCCCHHHH
AFIKRIGQLTPEAPVSTEEICIELPGREYAWWIWADRGVFDEHGKLVEVQAVGRDNTDVR
HHHHHHHCCCCCCCCCHHHEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHH
RSRMQLNQSAKMATLGEMSTGLAHEINQPLNVMRMAVVNVLKRLGRGDVDIEYLTEKLNR
HHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IDTQVQRAARVVDHMRVFGRRSEVEEQLFDPAQAVEGTISMLAEGMKGKGVQLRVGGMID
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCEE
AVRVRGHVDQLEQVLINLMVNARDALLSRREKDRDFEPWISVEAERDENIIRLAVQDNGG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCC
GIDPRLLERIFEPFFTTKPVGVGTGLGLSVSYGIVDQMGGQLSVANIGEGARFQIELPIF
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHCCCEEEEEECCCCCEEEEEEEEE
NADQPGS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]