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The map label for this gene is yabI [H]

Identifier: 66047598

GI number: 66047598

Start: 5224311

End: 5225627

Strand: Direct

Name: yabI [H]

Synonym: Psyr_4371

Alternate gene names: 66047598

Gene position: 5224311-5225627 (Clockwise)

Preceding gene: 66047597

Following gene: 66047599

Centisome position: 85.73

GC content: 63.55

Gene sequence:

>1317_bases
ATGGGCGATCTGCTCAATGGAATGACTGGCTGGCTGACCGCAAACCCTTCCTGGGTGGCTGTCGCGATCTTTTTGGTGGC
CTTCATTGAATGCGTCGCGATCGTCGGGATCGTCGTGCCGGGCACGGTCATCATGTTTGCCATCGCCGCCCTGGCGGGCA
GCGGGATACTGCCGTTGAGTGAAGTGCTGTTGCTGGGTTTTCTCGGTGGGCTGCTGGGTGACGCGGTGTCGTACTTCGTA
GGCCGGCGCTTTCATCAGAATATCCGTCAATTGCCCGGCTTGCGCACGCACCCGGAGTGGATGGAAGGTGCGGAAAAATA
CTTCCACCGTTACGGCATTGCCAGTTTGCTGGTAGGACGCTTCATCGGTCCGTTGCGCCCGATGCTGCCGATGATCGCCG
GGATGTGCGACATGCCGCTGCCGCGCTTCGTGGCGGTCAGTGTGCTGGCGGCGGCAGGCTGGTCGATTGCCTACCTGATG
CCGGGCTGGGCGGCAGGTGCAGCGATTCGCCTGCCACTGCCGGAAGGCTTCTGGCCCGAGGCGGCCGTGGTCGGCGGCGG
CCTGGCCGTCCTGTTCGGGCTGAGCATCCAGAGCAGTATTCGCCAGAAACGCTACGCAACCCGACTGATTTCCGCGCTCA
GCCTGACGCTGGTCGCGGCGCTGTTCTTCGGCTTCCCCCTGTTGGCCGACTTCGACAACGGCCTGATGACGCTCATCCAG
GAACACCGCAGCGAAGCCACGCAGCACATTGTGGTCTTCGTCACCAGCATCGGCGATTTCAGGGCGCAGTTGCTGGCTGC
CAGTCTGCTAATCATCGTGCTGGCGGTTGCCAGGCAATGGCGCCACGCAGCCTTTGCCCTGACCGCCACACTGGGCACCG
CGATCGCCAACGGCATCCTGAAAACGTTTTTCGCCCGCGCTCGCCCGGAGGTGCTGTTAGAGCCGCTGACCACGTACAGC
ATGCCCAGCGGCCATAGCTCGGCGGCCTTTGCGCTGTTCATGACCCTGGCAGTGCTGGCCGGACGTGGCCAGCCCGTGCG
GCTGCGCCTGACCTGGATGCTGGTCGCCGGTATTCCGGCTCTGGCAATCGCTCTGTCGAGGGTTTACCTGGGCGTTCACT
GGCCTACCGATATTCTCGCCGGCATGCTTCTGGCGTTCTGTGTCTGCGCCGCCAGCCTGGCGCTCATTCAACGCAAGGAC
CCCTTGCCGGCCATGTCGGTGCGCGTCTGGTGGCTCGTCGTGCCCGCCATGACCGCGTTGCTGGGTATTTTTGCCGTTCG
CGCCCTGTCGCACGGTGTGCTGCGTTACCAGTATTGA

Upstream 100 bases:

>100_bases
CGTGGATGCCGGGTACGCCCGTTTCTGCACACGGAACCCTCTCAGACGCGGTCAGGTCGAAGGCCGCGACTACTTATTTC
TCGATCAAGGAAACTGACCG

Downstream 100 bases:

>100_bases
TCGGCAGAACTGATCGCACCCGCGCGCAACGGGTGCGACACTTCTCAAATCTGGCACCTTGCCAGTGCTCTTTCGAGGCG
TTGACTACACTCTCCAGCGA

Product: DedA:phosphoesterase, PA-phosphatase related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MGDLLNGMTGWLTANPSWVAVAIFLVAFIECVAIVGIVVPGTVIMFAIAALAGSGILPLSEVLLLGFLGGLLGDAVSYFV
GRRFHQNIRQLPGLRTHPEWMEGAEKYFHRYGIASLLVGRFIGPLRPMLPMIAGMCDMPLPRFVAVSVLAAAGWSIAYLM
PGWAAGAAIRLPLPEGFWPEAAVVGGGLAVLFGLSIQSSIRQKRYATRLISALSLTLVAALFFGFPLLADFDNGLMTLIQ
EHRSEATQHIVVFVTSIGDFRAQLLAASLLIIVLAVARQWRHAAFALTATLGTAIANGILKTFFARARPEVLLEPLTTYS
MPSGHSSAAFALFMTLAVLAGRGQPVRLRLTWMLVAGIPALAIALSRVYLGVHWPTDILAGMLLAFCVCAASLALIQRKD
PLPAMSVRVWWLVVPAMTALLGIFAVRALSHGVLRYQY

Sequences:

>Translated_438_residues
MGDLLNGMTGWLTANPSWVAVAIFLVAFIECVAIVGIVVPGTVIMFAIAALAGSGILPLSEVLLLGFLGGLLGDAVSYFV
GRRFHQNIRQLPGLRTHPEWMEGAEKYFHRYGIASLLVGRFIGPLRPMLPMIAGMCDMPLPRFVAVSVLAAAGWSIAYLM
PGWAAGAAIRLPLPEGFWPEAAVVGGGLAVLFGLSIQSSIRQKRYATRLISALSLTLVAALFFGFPLLADFDNGLMTLIQ
EHRSEATQHIVVFVTSIGDFRAQLLAASLLIIVLAVARQWRHAAFALTATLGTAIANGILKTFFARARPEVLLEPLTTYS
MPSGHSSAAFALFMTLAVLAGRGQPVRLRLTWMLVAGIPALAIALSRVYLGVHWPTDILAGMLLAFCVCAASLALIQRKD
PLPAMSVRVWWLVVPAMTALLGIFAVRALSHGVLRYQY
>Mature_437_residues
GDLLNGMTGWLTANPSWVAVAIFLVAFIECVAIVGIVVPGTVIMFAIAALAGSGILPLSEVLLLGFLGGLLGDAVSYFVG
RRFHQNIRQLPGLRTHPEWMEGAEKYFHRYGIASLLVGRFIGPLRPMLPMIAGMCDMPLPRFVAVSVLAAAGWSIAYLMP
GWAAGAAIRLPLPEGFWPEAAVVGGGLAVLFGLSIQSSIRQKRYATRLISALSLTLVAALFFGFPLLADFDNGLMTLIQE
HRSEATQHIVVFVTSIGDFRAQLLAASLLIIVLAVARQWRHAAFALTATLGTAIANGILKTFFARARPEVLLEPLTTYSM
PSGHSSAAFALFMTLAVLAGRGQPVRLRLTWMLVAGIPALAIALSRVYLGVHWPTDILAGMLLAFCVCAASLALIQRKDP
LPAMSVRVWWLVVPAMTALLGIFAVRALSHGVLRYQY

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=161, Percent_Identity=37.888198757764, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1788656, Length=153, Percent_Identity=26.1437908496732, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789481, Length=160, Percent_Identity=27.5, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 47084; Mature: 46953

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCHHCCCC
>Mature Secondary Structure 
GDLLNGMTGWLTANPSWVAVAIFLVAFIECVAIVGIVVPGTVIMFAIAALAGSGILPLS
CCHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
EVLLLGFLGGLLGDAVSYFVGRRFHQNIRQLPGLRTHPEWMEGAEKYFHRYGIASLLVGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FIGPLRPMLPMIAGMCDMPLPRFVAVSVLAAAGWSIAYLMPGWAAGAAIRLPLPEGFWPE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHEECCCCCCCCCEEEECCCCCCCCC
AAVVGGGLAVLFGLSIQSSIRQKRYATRLISALSLTLVAALFFGFPLLADFDNGLMTLIQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHH
EHRSEATQHIVVFVTSIGDFRAQLLAASLLIIVLAVARQWRHAAFALTATLGTAIANGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTFFARARPEVLLEPLTTYSMPSGHSSAAFALFMTLAVLAGRGQPVRLRLTWMLVAGIPA
HHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH
LAIALSRVYLGVHWPTDILAGMLLAFCVCAASLALIQRKDPLPAMSVRVWWLVVPAMTAL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LGIFAVRALSHGVLRYQY
HHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]