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The map label for this gene is 66047597

Identifier: 66047597

GI number: 66047597

Start: 5223636

End: 5224307

Strand: Direct

Name: 66047597

Synonym: Psyr_4370

Alternate gene names: NA

Gene position: 5223636-5224307 (Clockwise)

Preceding gene: 66047584

Following gene: 66047598

Centisome position: 85.72

GC content: 62.5

Gene sequence:

>672_bases
ATGCCCACAGCCCTTCCCGACCACTTCTTTCATCGCGATGCCCAGGTGCTGGCGCGCGACCTGCTGGGCAAAGTCATTCG
CCACAAGGCAGGCGACCTGTGGCTGGCCGCGCGGATTATCGAAACCGAAGCGTACTACTGCGCCGAAAAGGGCAGCCATG
CCTCGCTGGGCTACACCGAGAAACGCAAGGCGCTGTTTCTCGACGGCGGCCACATCTATATGTACTACGCGCGTGGCGGC
GATTCGTTGAATTTCAGCGCCGAAGGGCCGGGCAATGCCGTGCTGATCAAATCGGCGTTTGCCTGGACCGACGCAACCAG
CGACGAAAACGCGCTGGCGCAGATGCAACTGAACAACCCCGACGCCAGCGGCGCGATGCGCCCGGCGCAACGGCTTTGCG
CTGGCCAGACGCTGCTGTGCAAGGCGCTCGGCCTGAAAGTCCCGGTGTGGGACGCCAAGCGCTTCGACCCGCAGAAATTG
CTGGTCGAGGACGTCGGCCAGACACCCGAACGTATCATCCAGACCACCCGACTGGGCATTCCTGCCGGGCGCGATGAGCA
CCTGATGTACCGCTTCGTGGATGCCGGGTACGCCCGTTTCTGCACACGGAACCCTCTCAGACGCGGTCAGGTCGAAGGCC
GCGACTACTTATTTCTCGATCAAGGAAACTGA

Upstream 100 bases:

>100_bases
CATGTTCAGAAACAACAAAGCGCCTAATCCGGACACATTCAGCTGCAATTAAACTTGCGCTTGTTATTATCGGGCTCTTT
CTCAATGTACCCGTCCGATT

Downstream 100 bases:

>100_bases
CCGATGGGCGATCTGCTCAATGGAATGACTGGCTGGCTGACCGCAAACCCTTCCTGGGTGGCTGTCGCGATCTTTTTGGT
GGCCTTCATTGAATGCGTCG

Product: 3-methyladenine DNA glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MPTALPDHFFHRDAQVLARDLLGKVIRHKAGDLWLAARIIETEAYYCAEKGSHASLGYTEKRKALFLDGGHIYMYYARGG
DSLNFSAEGPGNAVLIKSAFAWTDATSDENALAQMQLNNPDASGAMRPAQRLCAGQTLLCKALGLKVPVWDAKRFDPQKL
LVEDVGQTPERIIQTTRLGIPAGRDEHLMYRFVDAGYARFCTRNPLRRGQVEGRDYLFLDQGN

Sequences:

>Translated_223_residues
MPTALPDHFFHRDAQVLARDLLGKVIRHKAGDLWLAARIIETEAYYCAEKGSHASLGYTEKRKALFLDGGHIYMYYARGG
DSLNFSAEGPGNAVLIKSAFAWTDATSDENALAQMQLNNPDASGAMRPAQRLCAGQTLLCKALGLKVPVWDAKRFDPQKL
LVEDVGQTPERIIQTTRLGIPAGRDEHLMYRFVDAGYARFCTRNPLRRGQVEGRDYLFLDQGN
>Mature_222_residues
PTALPDHFFHRDAQVLARDLLGKVIRHKAGDLWLAARIIETEAYYCAEKGSHASLGYTEKRKALFLDGGHIYMYYARGGD
SLNFSAEGPGNAVLIKSAFAWTDATSDENALAQMQLNNPDASGAMRPAQRLCAGQTLLCKALGLKVPVWDAKRFDPQKLL
VEDVGQTPERIIQTTRLGIPAGRDEHLMYRFVDAGYARFCTRNPLRRGQVEGRDYLFLDQGN

Specific function: Unknown

COG id: COG2094

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA glycosylase MPG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011034
- InterPro:   IPR003180 [H]

Pfam domain/function: PF02245 Pur_DNA_glyco [H]

EC number: 3.2.2.-

Molecular weight: Translated: 24846; Mature: 24714

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTALPDHFFHRDAQVLARDLLGKVIRHKAGDLWLAARIIETEAYYCAEKGSHASLGYTE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHEECCCCCCCCCCCCC
KRKALFLDGGHIYMYYARGGDSLNFSAEGPGNAVLIKSAFAWTDATSDENALAQMQLNNP
CCCEEEEECCEEEEEEECCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCC
DASGAMRPAQRLCAGQTLLCKALGLKVPVWDAKRFDPQKLLVEDVGQTPERIIQTTRLGI
CCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCC
PAGRDEHLMYRFVDAGYARFCTRNPLRRGQVEGRDYLFLDQGN
CCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
PTALPDHFFHRDAQVLARDLLGKVIRHKAGDLWLAARIIETEAYYCAEKGSHASLGYTE
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHEECCCCCCCCCCCCC
KRKALFLDGGHIYMYYARGGDSLNFSAEGPGNAVLIKSAFAWTDATSDENALAQMQLNNP
CCCEEEEECCEEEEEEECCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCC
DASGAMRPAQRLCAGQTLLCKALGLKVPVWDAKRFDPQKLLVEDVGQTPERIIQTTRLGI
CCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCC
PAGRDEHLMYRFVDAGYARFCTRNPLRRGQVEGRDYLFLDQGN
CCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA