| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is mltB [H]
Identifier: 66047584
GI number: 66047584
Start: 5210314
End: 5211651
Strand: Direct
Name: mltB [H]
Synonym: Psyr_4357
Alternate gene names: 66047584
Gene position: 5210314-5211651 (Clockwise)
Preceding gene: 66047583
Following gene: 66047597
Centisome position: 85.5
GC content: 61.88
Gene sequence:
>1338_bases ATGCCTTCTCGTTTTACCCATCGCCCGCAGCTGCGCCAACTCATCGCTGCCTCCAGTCTTGTTGCCCTGGTAGCCTGCGC AGAAAAACCCACTGCAGCCGATGCCACACCTCTTCAATCCAGCAAGGTGCAGACAAACGCTCCTGCCGTAGCGCCTACGC CAGCACTGGTCGTTGATGACAACCTCACGATTCAGCCCGCCGTCAGCTTCAGCGAATGGCAGGCCGGCTTTCGTGCCCAG GCGTTGAAGGCAGGCATTCGCGCGGACGTATTCGATCTGGCATTTGCCGGCGTCACCCCCGACATGAGCGTAGTCAAGGC CGACCGCAGTCAGCCTGAATTCAGCCGCCCGGTCTGGGAATACCTTGACGGTGCCATCTCTGCCGCACGCGTACGCAAGG GTCAGGCGCTGCTGTCGCAGTATGCCGACGACCTGCAGAAGATCGAGCAGCAGTACGGCGTCGATCGTCAGACGCTGGTC GCGGTGTGGGGCATGGAAAGTAATTTCGGGTCGTTACAGGGTACGCAATCCGTCATTCGCTCACTCGCGACACTGGCCTA TGAAGGTCGCCGTCCCGGCTTTGCACAAAGCCAGTTGCTCGCCGCGCTGGAAATCATCCAGCATGGCGACATAACCCCGG ACAAAATGCTGGGTTCGTGGGCCGGTGCGATGGGCCAGACGCAGTTCATCCCTACCACCTACAACACCCACGCCGTGGAT TTTGACGGCGATGGCCGACGTGATATCTGGAACACCCCGGCCGATGCCCTGGCCTCCACTGCGCACTACCTGCAAAGCTC CGGCTGGCAGCGTGGTCAGCCCTGGGGCTTTGAAGTGGTGCTCGGCTCGGGGTTCGATTACTCGCTGGCCGATTCGACAA CCCGCAAGAGTCTCGTTGAATGGCAGCAACTGGGTCTGAAACAGCCCGACGGCTCAGCCATTCCGGTCGCCGCCAGCCAG CAGCAAGCCGCCTTGCTGTTGCCAGCCGGTTATCGCGGGCCAGCCTTTCTGGTGCTGGACAACTTCCGCGCGATTCTCAA GTACAACAACTCGACCTCCTACGCGTTGGCGATCAGCCTGCTCTCCGATCGCTTCAAGGGCGCGGGCTATGTCGTGGGCA GCTGGCCGCGCGGAGACCTGCCGCTGAGCCGCTCAGAGCGCATTGAGCTGCAAACCCTGCTCTCGGCACGCCAGTACGAC GCAGGCGCGCCAGACGGCATTATCGGCGCCAATACACGCAAGGCCATCCGCAGTGCGCAGCAATCGCTCGGCTGGCCAGC CGATGGTTACCCGACGCATGAATTGCTGGAGAACCTGCGCAAGCCTGTCGGGCAGTAA
Upstream 100 bases:
>100_bases GCTTTATGGCAGCCTGATATCGAGCAACATTTCCGGGGCGCTTTCAACCGCTTAGCCGTGTTATGGTCTGCACCTAACGG TAATACCCTTGGACTCAAGC
Downstream 100 bases:
>100_bases TCGGGAGGACGCAGAGCGTCCAGAACGGCATGCCAACGCGGAGCATTGGCACGATAGCGTTCTTACGGACGCCTATCGCT CCTCACGCTCCAGCGTGGGA
Product: hypothetical protein
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MPSRFTHRPQLRQLIAASSLVALVACAEKPTAADATPLQSSKVQTNAPAVAPTPALVVDDNLTIQPAVSFSEWQAGFRAQ ALKAGIRADVFDLAFAGVTPDMSVVKADRSQPEFSRPVWEYLDGAISAARVRKGQALLSQYADDLQKIEQQYGVDRQTLV AVWGMESNFGSLQGTQSVIRSLATLAYEGRRPGFAQSQLLAALEIIQHGDITPDKMLGSWAGAMGQTQFIPTTYNTHAVD FDGDGRRDIWNTPADALASTAHYLQSSGWQRGQPWGFEVVLGSGFDYSLADSTTRKSLVEWQQLGLKQPDGSAIPVAASQ QQAALLLPAGYRGPAFLVLDNFRAILKYNNSTSYALAISLLSDRFKGAGYVVGSWPRGDLPLSRSERIELQTLLSARQYD AGAPDGIIGANTRKAIRSAQQSLGWPADGYPTHELLENLRKPVGQ
Sequences:
>Translated_445_residues MPSRFTHRPQLRQLIAASSLVALVACAEKPTAADATPLQSSKVQTNAPAVAPTPALVVDDNLTIQPAVSFSEWQAGFRAQ ALKAGIRADVFDLAFAGVTPDMSVVKADRSQPEFSRPVWEYLDGAISAARVRKGQALLSQYADDLQKIEQQYGVDRQTLV AVWGMESNFGSLQGTQSVIRSLATLAYEGRRPGFAQSQLLAALEIIQHGDITPDKMLGSWAGAMGQTQFIPTTYNTHAVD FDGDGRRDIWNTPADALASTAHYLQSSGWQRGQPWGFEVVLGSGFDYSLADSTTRKSLVEWQQLGLKQPDGSAIPVAASQ QQAALLLPAGYRGPAFLVLDNFRAILKYNNSTSYALAISLLSDRFKGAGYVVGSWPRGDLPLSRSERIELQTLLSARQYD AGAPDGIIGANTRKAIRSAQQSLGWPADGYPTHELLENLRKPVGQ >Mature_444_residues PSRFTHRPQLRQLIAASSLVALVACAEKPTAADATPLQSSKVQTNAPAVAPTPALVVDDNLTIQPAVSFSEWQAGFRAQA LKAGIRADVFDLAFAGVTPDMSVVKADRSQPEFSRPVWEYLDGAISAARVRKGQALLSQYADDLQKIEQQYGVDRQTLVA VWGMESNFGSLQGTQSVIRSLATLAYEGRRPGFAQSQLLAALEIIQHGDITPDKMLGSWAGAMGQTQFIPTTYNTHAVDF DGDGRRDIWNTPADALASTAHYLQSSGWQRGQPWGFEVVLGSGFDYSLADSTTRKSLVEWQQLGLKQPDGSAIPVAASQQ QAALLLPAGYRGPAFLVLDNFRAILKYNNSTSYALAISLLSDRFKGAGYVVGSWPRGDLPLSRSERIELQTLLSARQYDA GAPDGIIGANTRKAIRSAQQSLGWPADGYPTHELLENLRKPVGQ
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=244, Percent_Identity=33.6065573770492, Blast_Score=118, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 48147; Mature: 48015
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRFTHRPQLRQLIAASSLVALVACAEKPTAADATPLQSSKVQTNAPAVAPTPALVVDD CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC NLTIQPAVSFSEWQAGFRAQALKAGIRADVFDLAFAGVTPDMSVVKADRSQPEFSRPVWE CEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHH YLDGAISAARVRKGQALLSQYADDLQKIEQQYGVDRQTLVAVWGMESNFGSLQGTQSVIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCHHHHHHHH SLATLAYEGRRPGFAQSQLLAALEIIQHGDITPDKMLGSWAGAMGQTQFIPTTYNTHAVD HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCCEEEE FDGDGRRDIWNTPADALASTAHYLQSSGWQRGQPWGFEVVLGSGFDYSLADSTTRKSLVE CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH WQQLGLKQPDGSAIPVAASQQQAALLLPAGYRGPAFLVLDNFRAILKYNNSTSYALAISL HHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEEECCCCCHHHHHHH LSDRFKGAGYVVGSWPRGDLPLSRSERIELQTLLSARQYDAGAPDGIIGANTRKAIRSAQ HHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH QSLGWPADGYPTHELLENLRKPVGQ HHCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PSRFTHRPQLRQLIAASSLVALVACAEKPTAADATPLQSSKVQTNAPAVAPTPALVVDD CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC NLTIQPAVSFSEWQAGFRAQALKAGIRADVFDLAFAGVTPDMSVVKADRSQPEFSRPVWE CEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHH YLDGAISAARVRKGQALLSQYADDLQKIEQQYGVDRQTLVAVWGMESNFGSLQGTQSVIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCHHHHHHHH SLATLAYEGRRPGFAQSQLLAALEIIQHGDITPDKMLGSWAGAMGQTQFIPTTYNTHAVD HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCCEEEE FDGDGRRDIWNTPADALASTAHYLQSSGWQRGQPWGFEVVLGSGFDYSLADSTTRKSLVE CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH WQQLGLKQPDGSAIPVAASQQQAALLLPAGYRGPAFLVLDNFRAILKYNNSTSYALAISL HHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEEECCCCCHHHHHHH LSDRFKGAGYVVGSWPRGDLPLSRSERIELQTLLSARQYDAGAPDGIIGANTRKAIRSAQ HHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH QSLGWPADGYPTHELLENLRKPVGQ HHCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]