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The map label for this gene is bkdR [H]

Identifier: 66047562

GI number: 66047562

Start: 5187086

End: 5187577

Strand: Direct

Name: bkdR [H]

Synonym: Psyr_4335

Alternate gene names: 66047562

Gene position: 5187086-5187577 (Clockwise)

Preceding gene: 66047560

Following gene: 66047567

Centisome position: 85.12

GC content: 58.13

Gene sequence:

>492_bases
ATGGGGTGCATCGTGAGCAAGCTCGACAGATACGACCTGAGCATTTTGGCTGAATTGCAACGGGACGCACGCATATCCAA
CCAGGAATTGGCCGAACGCATTGGTCTGTCGCCGTCACCCTGCTCGCGCCGGGTCAAGCAACTGGAAGACGACGGTTACA
TCGTGCGCCAGGTTGCCCTGCTGGATCGCAAGAAACTGGGTCTGAACCTGACCGCCTACGTGCTGATCGGCATGGACCGG
CACACGCCCGAGCGCTTCGAGAATTTCGAGCAGCAGATCCGCAACCTGCCTCAGGTTCTGGAATGCAGCCTGGTGACCGG
CATGGACGCGGACTATCAACTGAAAGTGGTGGTGCCGGACATGGATCACTATCAGAAACTGCTGTTGGGCCATCTGACCC
GCATCGAAGGCGTGACCAGCGTCAAATCGAGCTTTGTGCTCAATCAGGTGCTGGCCAGCACCGAAATGCCGCTGACTCAC
CTGCGCAACTGA

Upstream 100 bases:

>100_bases
GGCCTGAGGCTAAGGCAGAAGATTGCTAATATTGCGGATTAAAACATTACTTGCGCAATTTTTGACTTCAGATGAATAAT
CCAGCGCAATTGAATTGATA

Downstream 100 bases:

>100_bases
GCCAACACCGGCTTCACAGTTTTGCGGCGACTTCCCTGTACTGGCCCTGATCCAGGCCCTCCAGCGTCCAGTCGCCAATC
CTGACCCGCACCAGCCGCAG

Product: regulatory proteins, AsnC/Lrp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MGCIVSKLDRYDLSILAELQRDARISNQELAERIGLSPSPCSRRVKQLEDDGYIVRQVALLDRKKLGLNLTAYVLIGMDR
HTPERFENFEQQIRNLPQVLECSLVTGMDADYQLKVVVPDMDHYQKLLLGHLTRIEGVTSVKSSFVLNQVLASTEMPLTH
LRN

Sequences:

>Translated_163_residues
MGCIVSKLDRYDLSILAELQRDARISNQELAERIGLSPSPCSRRVKQLEDDGYIVRQVALLDRKKLGLNLTAYVLIGMDR
HTPERFENFEQQIRNLPQVLECSLVTGMDADYQLKVVVPDMDHYQKLLLGHLTRIEGVTSVKSSFVLNQVLASTEMPLTH
LRN
>Mature_162_residues
GCIVSKLDRYDLSILAELQRDARISNQELAERIGLSPSPCSRRVKQLEDDGYIVRQVALLDRKKLGLNLTAYVLIGMDRH
TPERFENFEQQIRNLPQVLECSLVTGMDADYQLKVVVPDMDHYQKLLLGHLTRIEGVTSVKSSFVLNQVLASTEMPLTHL
RN

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=149, Percent_Identity=44.9664429530201, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI87081742, Length=151, Percent_Identity=39.0728476821192, Blast_Score=114, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18565; Mature: 18434

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCIVSKLDRYDLSILAELQRDARISNQELAERIGLSPSPCSRRVKQLEDDGYIVRQVAL
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH
LDRKKLGLNLTAYVLIGMDRHTPERFENFEQQIRNLPQVLECSLVTGMDADYQLKVVVPD
HHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
MDHYQKLLLGHLTRIEGVTSVKSSFVLNQVLASTEMPLTHLRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure 
GCIVSKLDRYDLSILAELQRDARISNQELAERIGLSPSPCSRRVKQLEDDGYIVRQVAL
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH
LDRKKLGLNLTAYVLIGMDRHTPERFENFEQQIRNLPQVLECSLVTGMDADYQLKVVVPD
HHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
MDHYQKLLLGHLTRIEGVTSVKSSFVLNQVLASTEMPLTHLRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]