| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fieF [H]
Identifier: 66047560
GI number: 66047560
Start: 5184638
End: 5185531
Strand: Direct
Name: fieF [H]
Synonym: Psyr_4333
Alternate gene names: 66047560
Gene position: 5184638-5185531 (Clockwise)
Preceding gene: 66047559
Following gene: 66047562
Centisome position: 85.08
GC content: 62.19
Gene sequence:
>894_bases ATGAGCACCACTGCCGAACATTCCCGACTGCTGCGTCTGGCGACACGGGCCTCGCTGGCGGTTGCCACGACGCTGATCCT GGCCAAGGGCGTTGCCTGGTGGCTGAGCGGCTCGGTGAGCCTGCTGGCCGGTCTCACCGACTCGCTGCTGGATGGCGCAG CCTCGTTCCTCAACCTGCTGGCGGTGCACTATGCACTGAGGCCTGCCGATGACGATCATCGCTATGGTCACGGCAAGGCG GAAGCGCTGTCGGGCATGGCGCAGGCGTTGTTCATCACCGTCAGTGGTGTGCTGATTGCCGTTCAGGCGGTCGAGCGCAT TCAGAACCCGGAACCGCTGGGCGCGCCGCTGCTGGGCATGGTCGTGATGGTGATTTCCATCGCGCTGACGATCGCACTGC TCACCCTGCAATACCGGGTGATCAAGGCGACCGGCTCGGCAGCGATCCGCGCTGATTCGCTGCACTACCGTTCAGACCTG CTGCTTAACGCCAGCATCCTGGTGGCGCTGACGCTGGCGTATTTCGGCTGGCAGCAGCTGGACGCGTATTTTGGTCTGGG CATCGCGCTGTATATTTTGTGGAGCGCCTTTCAAATCGCCCGCGAAACCATATCGGTGCTCATGGATGCGGAGTTGCCCG CCGATGTCAGCACTCAAATGCTGGCATTGGCATGCGAAGTGCCGGGCGTGCTCGGTGCGCATGATCTGCGTACACGAATC TCCGGCAATCACTGGTTTGTGCAGTTGCACCTGGAGCTGCCGGGCAGCCTGACGCTGTCGGTCGCCCACGCCATTTGTGA TCAGGTGGCTGACGCCATTCACAAGCAATTCCCGAAGGCCGAGGTGCTGGTACACGCCGACCCTCAGGAAGTCGTCAAAC AGGCCAGTGCCTGA
Upstream 100 bases:
>100_bases AACGATCCACGCCTGATCCAGCATAAAGGCAGCGTGGAACAACTGGCAGCACTGGGCCTGGTCCCTGCCGCCTGATATCG ATCCCGTTCAAGGAAGCGTC
Downstream 100 bases:
>100_bases CCGATATCAGTTGACGGTGTAGCCCCGCCCCGCCAGGCACGCGCCCATTGAGCGACGATACAGATCGACCACGTCAGGCG GTGGCTGGCTGGTGACATTG
Product: cation efflux protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSTTAEHSRLLRLATRASLAVATTLILAKGVAWWLSGSVSLLAGLTDSLLDGAASFLNLLAVHYALRPADDDHRYGHGKA EALSGMAQALFITVSGVLIAVQAVERIQNPEPLGAPLLGMVVMVISIALTIALLTLQYRVIKATGSAAIRADSLHYRSDL LLNASILVALTLAYFGWQQLDAYFGLGIALYILWSAFQIARETISVLMDAELPADVSTQMLALACEVPGVLGAHDLRTRI SGNHWFVQLHLELPGSLTLSVAHAICDQVADAIHKQFPKAEVLVHADPQEVVKQASA
Sequences:
>Translated_297_residues MSTTAEHSRLLRLATRASLAVATTLILAKGVAWWLSGSVSLLAGLTDSLLDGAASFLNLLAVHYALRPADDDHRYGHGKA EALSGMAQALFITVSGVLIAVQAVERIQNPEPLGAPLLGMVVMVISIALTIALLTLQYRVIKATGSAAIRADSLHYRSDL LLNASILVALTLAYFGWQQLDAYFGLGIALYILWSAFQIARETISVLMDAELPADVSTQMLALACEVPGVLGAHDLRTRI SGNHWFVQLHLELPGSLTLSVAHAICDQVADAIHKQFPKAEVLVHADPQEVVKQASA >Mature_296_residues STTAEHSRLLRLATRASLAVATTLILAKGVAWWLSGSVSLLAGLTDSLLDGAASFLNLLAVHYALRPADDDHRYGHGKAE ALSGMAQALFITVSGVLIAVQAVERIQNPEPLGAPLLGMVVMVISIALTIALLTLQYRVIKATGSAAIRADSLHYRSDLL LNASILVALTLAYFGWQQLDAYFGLGIALYILWSAFQIARETISVLMDAELPADVSTQMLALACEVPGVLGAHDLRTRIS GNHWFVQLHLELPGSLTLSVAHAICDQVADAIHKQFPKAEVLVHADPQEVVKQASA
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=288, Percent_Identity=44.7916666666667, Blast_Score=261, Evalue=3e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 31742; Mature: 31611
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTAEHSRLLRLATRASLAVATTLILAKGVAWWLSGSVSLLAGLTDSLLDGAASFLNLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AVHYALRPADDDHRYGHGKAEALSGMAQALFITVSGVLIAVQAVERIQNPEPLGAPLLGM HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VVMVISIALTIALLTLQYRVIKATGSAAIRADSLHYRSDLLLNASILVALTLAYFGWQQL HHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH DAYFGLGIALYILWSAFQIARETISVLMDAELPADVSTQMLALACEVPGVLGAHDLRTRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHC SGNHWFVQLHLELPGSLTLSVAHAICDQVADAIHKQFPKAEVLVHADPQEVVKQASA CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCC >Mature Secondary Structure STTAEHSRLLRLATRASLAVATTLILAKGVAWWLSGSVSLLAGLTDSLLDGAASFLNLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AVHYALRPADDDHRYGHGKAEALSGMAQALFITVSGVLIAVQAVERIQNPEPLGAPLLGM HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VVMVISIALTIALLTLQYRVIKATGSAAIRADSLHYRSDLLLNASILVALTLAYFGWQQL HHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH DAYFGLGIALYILWSAFQIARETISVLMDAELPADVSTQMLALACEVPGVLGAHDLRTRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHC SGNHWFVQLHLELPGSLTLSVAHAICDQVADAIHKQFPKAEVLVHADPQEVVKQASA CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA