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The map label for this gene is dnaJ [H]

Identifier: 66047553

GI number: 66047553

Start: 5178780

End: 5179790

Strand: Reverse

Name: dnaJ [H]

Synonym: Psyr_4326

Alternate gene names: 66047553

Gene position: 5179790-5178780 (Counterclockwise)

Preceding gene: 66047554

Following gene: 66047551

Centisome position: 85.0

GC content: 57.96

Gene sequence:

>1011_bases
ATGATCAACCTCACCAACCTTGCATCTTCGTTGGCGCGAGTGGCGCTCAGCGATTCGACAAAGCCAACGATAGACCGCGC
GATGAACGTCGTCAGCCATATCGCTGGCAAAGTGGCGTTGCAGGTCAACAGCTCATTGCTGGAGCAGAAAGGCCGGCTCA
ACGAGCGCCAGCAGAAAGGCCTCGAGGTGATCCTCGACGCATTGCTCGGCAAGGAACCGGTGACCCATGTCGAGACGCAC
GAAGGGGGAGGCCGATTCAATCTGGCGCGAGCTGCCTTCGACGTGGCCAGCGTTGTCTGGGAGCGCGACCAGTCGATGCG
CAACGTGATGAGCTTTTTGGGCATCAATGATAGCAAGGGCAACCTGCTGTTCTCTCTGGGCAAGACGCTGGCCGACGCGA
TGGCCAGGCCCGAACCCGAGAATGGCAAGCACAACAGTGAGGCGAACTACGCATTCTTCTCCAGCAACTTGAAGCTGAAC
AAACTGATGAATGACATCGCTGACCAGGTGATCAACGAGATTCGTCAGCAGAACACCGATCGCGTGCGACGACCCACACC
GGGCCCATCCTGGAGACCTGAAAGTACTCAACAGCAAGCACGCCCACAAACGCCTCCAAGCGCTCGCCCCCAGGCCAATA
GCGCGCCGCCACCGCCGAAAGCCCAGCCCGATGCGGGCGCTCAGCGGCCGTCAACAGAGCGGCCCCCCAAAACAACCCCC
ACTGGCGCGTCCGCGAAGGTGGACGATTCCGCCCCCGCCAAACCACCCGTGAAACAGTTGTACGAGCACTTGGGCCTCTC
GGACATGACGGCGGACCTCTCCGCAGTCAAAAAGGCTTACAAGAAGGCCGCGTTGAAGTACCACCCTGATAAAAACGCGG
GCAACGTGGCCGAGGCGAATGAGCGTTTCAAAAAAATTTCAAATGCGTTCAGGATTTTGTCCGATCCAGAATTGCGTACG
AAATACGACAATGGCGTTATTGATGAGAACGGTAACGAGTTCAAGACCTGA

Upstream 100 bases:

>100_bases
ATGCTCGCGTCAGTGCTCTGCACCTGTGCAGAGTTGCACATCCCGTGGAACCGGATCTCGTTGCTTGCCACCAAGGCGGT
ATGAGTTTCCGGAGAAGCAG

Downstream 100 bases:

>100_bases
CTTTTCGGCGTGAGGCATGCTGGCGGCAGTGTTATTGAGCAGTGGGCTCCACGCGCAAGTAGCCCCGATAACTAAACGCT
GCTCTTCGTTGATCACACTG

Product: type III effector HopI1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MINLTNLASSLARVALSDSTKPTIDRAMNVVSHIAGKVALQVNSSLLEQKGRLNERQQKGLEVILDALLGKEPVTHVETH
EGGGRFNLARAAFDVASVVWERDQSMRNVMSFLGINDSKGNLLFSLGKTLADAMARPEPENGKHNSEANYAFFSSNLKLN
KLMNDIADQVINEIRQQNTDRVRRPTPGPSWRPESTQQQARPQTPPSARPQANSAPPPPKAQPDAGAQRPSTERPPKTTP
TGASAKVDDSAPAKPPVKQLYEHLGLSDMTADLSAVKKAYKKAALKYHPDKNAGNVAEANERFKKISNAFRILSDPELRT
KYDNGVIDENGNEFKT

Sequences:

>Translated_336_residues
MINLTNLASSLARVALSDSTKPTIDRAMNVVSHIAGKVALQVNSSLLEQKGRLNERQQKGLEVILDALLGKEPVTHVETH
EGGGRFNLARAAFDVASVVWERDQSMRNVMSFLGINDSKGNLLFSLGKTLADAMARPEPENGKHNSEANYAFFSSNLKLN
KLMNDIADQVINEIRQQNTDRVRRPTPGPSWRPESTQQQARPQTPPSARPQANSAPPPPKAQPDAGAQRPSTERPPKTTP
TGASAKVDDSAPAKPPVKQLYEHLGLSDMTADLSAVKKAYKKAALKYHPDKNAGNVAEANERFKKISNAFRILSDPELRT
KYDNGVIDENGNEFKT
>Mature_336_residues
MINLTNLASSLARVALSDSTKPTIDRAMNVVSHIAGKVALQVNSSLLEQKGRLNERQQKGLEVILDALLGKEPVTHVETH
EGGGRFNLARAAFDVASVVWERDQSMRNVMSFLGINDSKGNLLFSLGKTLADAMARPEPENGKHNSEANYAFFSSNLKLN
KLMNDIADQVINEIRQQNTDRVRRPTPGPSWRPESTQQQARPQTPPSARPQANSAPPPPKAQPDAGAQRPSTERPPKTTP
TGASAKVDDSAPAKPPVKQLYEHLGLSDMTADLSAVKKAYKKAALKYHPDKNAGNVAEANERFKKISNAFRILSDPELRT
KYDNGVIDENGNEFKT

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI68077166, Length=68, Percent_Identity=52.9411764705882, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI68077168, Length=68, Percent_Identity=52.9411764705882, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1786197, Length=64, Percent_Identity=46.875, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17554644, Length=76, Percent_Identity=46.0526315789474, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324103, Length=63, Percent_Identity=52.3809523809524, Blast_Score=66, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6324265, Length=66, Percent_Identity=51.5151515151515, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324321, Length=65, Percent_Identity=52.3076923076923, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24762799, Length=68, Percent_Identity=47.0588235294118, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 36761; Mature: 36761

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLTNLASSLARVALSDSTKPTIDRAMNVVSHIAGKVALQVNSSLLEQKGRLNERQQKG
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LEVILDALLGKEPVTHVETHEGGGRFNLARAAFDVASVVWERDQSMRNVMSFLGINDSKG
HHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NLLFSLGKTLADAMARPEPENGKHNSEANYAFFSSNLKLNKLMNDIADQVINEIRQQNTD
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHH
RVRRPTPGPSWRPESTQQQARPQTPPSARPQANSAPPPPKAQPDAGAQRPSTERPPKTTP
HCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGASAKVDDSAPAKPPVKQLYEHLGLSDMTADLSAVKKAYKKAALKYHPDKNAGNVAEAN
CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
ERFKKISNAFRILSDPELRTKYDNGVIDENGNEFKT
HHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINLTNLASSLARVALSDSTKPTIDRAMNVVSHIAGKVALQVNSSLLEQKGRLNERQQKG
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LEVILDALLGKEPVTHVETHEGGGRFNLARAAFDVASVVWERDQSMRNVMSFLGINDSKG
HHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NLLFSLGKTLADAMARPEPENGKHNSEANYAFFSSNLKLNKLMNDIADQVINEIRQQNTD
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHH
RVRRPTPGPSWRPESTQQQARPQTPPSARPQANSAPPPPKAQPDAGAQRPSTERPPKTTP
HCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGASAKVDDSAPAKPPVKQLYEHLGLSDMTADLSAVKKAYKKAALKYHPDKNAGNVAEAN
CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
ERFKKISNAFRILSDPELRTKYDNGVIDENGNEFKT
HHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12552129 [H]