Click here to switch to the map view.

The map label for this gene is 66047537

Identifier: 66047537

GI number: 66047537

Start: 5136129

End: 5137064

Strand: Reverse

Name: 66047537

Synonym: Psyr_4310

Alternate gene names: NA

Gene position: 5137064-5136129 (Counterclockwise)

Preceding gene: 66047538

Following gene: 66047536

Centisome position: 84.3

GC content: 47.97

Gene sequence:

>936_bases
TTGCCAGGGAATGCCGGTATGTCCAATCTGTTTATTTCTAACGTCGTGTTTGATTTCGGCGAGTCGAAGTCAATTGATAG
CTTGTCATCTTGCATGAGTCCTGATGAGCTTAAGGCCTTTCGGGCGGGCGGCTTTGAATATTATGTAAATGAAAGTCGTG
ACGTTTATGCTGTGTGCGAAAAGGTAGCCGCGAAGGTCCTGGATGAGAGCCATGTCGGTCGAGAGGATGTGACCGATATT
GTCTATATCAGCTCAACCAAATTCATTGACAAGGTCGTTGGCCTGAGTGTCTACCTCTCGAAGTTGGCAGCGAATATCGG
TATTCATAAGGCGACGCTGTATGCCTTGTCTGCGGGGGAGTGCGGTAATTTCGTTCATGCCTTGCGTTTTTGTGGGCAGA
TCCTGCAGGAGCGTCCAGACAGTAAGGTTTTGTTGGTATTCGCAGAAAAGCTGATGACTGACGAGGAGCGGCATTATCCT
GGAACGGCGATTTTAAGTGACGGGGTGGCAGTTTGTCTGGTGACCTGCGAAAAAACCGGAAACTGCTACGAGGTTATCGC
GCGGTCGGAGGCCACCGACCACCGAGTCACTAAGGCTTATGCTGAACAGAAAACTATTGATGCGTTGCGGCTCGCCTTGA
CCGCAATTCATACGCTGTCTAGGGATATTTTTTTGAAAGTTGATTTTGATAAAAGTGCTATAAACCACTTCATAACCAAT
AACTTTATTATGCACTTGTCCAAAATGTACATTATGGAGGTCGGCGGCGACGCCTCAAAACTCAGGCTGCCAACGCGGCC
TCCGAAAGCGCATGTTTTTACGATTGATTGTTTGTTGAATCTGACTGGGACCCCGATGGATGATGGTGATTTGGCCTTTT
GCCTGAGTTTTGGCATGTTTTTTTGGGGGGCATGCATCGTTAAGTACCATGCCTGA

Upstream 100 bases:

>100_bases
AACAGCCCTCGTTGGCTGAGTTAAGCTCGGCTCTTTTGAATGGCGTATAGGCTGCCAGGGCTTTGAGTATTTGGACTGTC
TCTTTTTTGTATATATTTAA

Downstream 100 bases:

>100_bases
AAAAGCTTTATGACCGCGTGTTTATGCCTTGGGGACGTACGCGCGCGGACGGGGTCGAGTTGCGGGGCGCGCGGTGAGTG
ACCAGGTATTCAATGAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MPGNAGMSNLFISNVVFDFGESKSIDSLSSCMSPDELKAFRAGGFEYYVNESRDVYAVCEKVAAKVLDESHVGREDVTDI
VYISSTKFIDKVVGLSVYLSKLAANIGIHKATLYALSAGECGNFVHALRFCGQILQERPDSKVLLVFAEKLMTDEERHYP
GTAILSDGVAVCLVTCEKTGNCYEVIARSEATDHRVTKAYAEQKTIDALRLALTAIHTLSRDIFLKVDFDKSAINHFITN
NFIMHLSKMYIMEVGGDASKLRLPTRPPKAHVFTIDCLLNLTGTPMDDGDLAFCLSFGMFFWGACIVKYHA

Sequences:

>Translated_311_residues
MPGNAGMSNLFISNVVFDFGESKSIDSLSSCMSPDELKAFRAGGFEYYVNESRDVYAVCEKVAAKVLDESHVGREDVTDI
VYISSTKFIDKVVGLSVYLSKLAANIGIHKATLYALSAGECGNFVHALRFCGQILQERPDSKVLLVFAEKLMTDEERHYP
GTAILSDGVAVCLVTCEKTGNCYEVIARSEATDHRVTKAYAEQKTIDALRLALTAIHTLSRDIFLKVDFDKSAINHFITN
NFIMHLSKMYIMEVGGDASKLRLPTRPPKAHVFTIDCLLNLTGTPMDDGDLAFCLSFGMFFWGACIVKYHA
>Mature_310_residues
PGNAGMSNLFISNVVFDFGESKSIDSLSSCMSPDELKAFRAGGFEYYVNESRDVYAVCEKVAAKVLDESHVGREDVTDIV
YISSTKFIDKVVGLSVYLSKLAANIGIHKATLYALSAGECGNFVHALRFCGQILQERPDSKVLLVFAEKLMTDEERHYPG
TAILSDGVAVCLVTCEKTGNCYEVIARSEATDHRVTKAYAEQKTIDALRLALTAIHTLSRDIFLKVDFDKSAINHFITNN
FIMHLSKMYIMEVGGDASKLRLPTRPPKAHVFTIDCLLNLTGTPMDDGDLAFCLSFGMFFWGACIVKYHA

Specific function: Unknown

COG id: COG0332

COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34333; Mature: 34202

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGNAGMSNLFISNVVFDFGESKSIDSLSSCMSPDELKAFRAGGFEYYVNESRDVYAVCE
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCEEEEECCCCHHHHHHH
KVAAKVLDESHVGREDVTDIVYISSTKFIDKVVGLSVYLSKLAANIGIHKATLYALSAGE
HHHHHHHHHHCCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCC
CGNFVHALRFCGQILQERPDSKVLLVFAEKLMTDEERHYPGTAILSDGVAVCLVTCEKTG
HHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCHHCCCCCHHHHCCEEEEEEEECCCC
NCYEVIARSEATDHRVTKAYAEQKTIDALRLALTAIHTLSRDIFLKVDFDKSAINHFITN
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHH
NFIMHLSKMYIMEVGGDASKLRLPTRPPKAHVFTIDCLLNLTGTPMDDGDLAFCLSFGMF
HHHHHHHHHHHEEECCCHHEEECCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHH
FWGACIVKYHA
HHHHHHHEECC
>Mature Secondary Structure 
PGNAGMSNLFISNVVFDFGESKSIDSLSSCMSPDELKAFRAGGFEYYVNESRDVYAVCE
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCEEEEECCCCHHHHHHH
KVAAKVLDESHVGREDVTDIVYISSTKFIDKVVGLSVYLSKLAANIGIHKATLYALSAGE
HHHHHHHHHHCCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCC
CGNFVHALRFCGQILQERPDSKVLLVFAEKLMTDEERHYPGTAILSDGVAVCLVTCEKTG
HHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCHHCCCCCHHHHCCEEEEEEEECCCC
NCYEVIARSEATDHRVTKAYAEQKTIDALRLALTAIHTLSRDIFLKVDFDKSAINHFITN
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHH
NFIMHLSKMYIMEVGGDASKLRLPTRPPKAHVFTIDCLLNLTGTPMDDGDLAFCLSFGMF
HHHHHHHHHHHEEECCCHHEEECCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHH
FWGACIVKYHA
HHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA