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The map label for this gene is 66047536

Identifier: 66047536

GI number: 66047536

Start: 5135391

End: 5136005

Strand: Reverse

Name: 66047536

Synonym: Psyr_4309

Alternate gene names: NA

Gene position: 5136005-5135391 (Counterclockwise)

Preceding gene: 66047537

Following gene: 66047535

Centisome position: 84.28

GC content: 44.23

Gene sequence:

>615_bases
GTGCAAGGGTGTGATATGCATGAACTACTGAAGGTAGCGATTGAGTCTGCTGTACTGTTATTTGTTCCGGGACCGACGAA
TACGTTATTGCTGGCGGCCGGCGTGTCCAAGGGGTTTTTGAAGTCTGCTGGTTTACCGCTGTTCGAGCTTTCCGGCTACG
TGATTGCGATCACCTTCTATTCCATTCTGATCGAATATGTCTCGGGCAATACAGGTTGTCTGTTTTTCATGAAGGTGTTC
TGTGCGGGCTATATATCTTACATGTCTTGCAAGACGTGGAAGCTTTCAGGTAACTTTTTAAAAGCGACCGAAACTATTTT
GGGAATTAATATATTTATTACTACGCTGTTTAATCCGAAAGCATTTATTGTGTCTTCGATCATCTTTTCCGTTACGCTTA
TCGACGATCCGCTTTTAATTGCTCAGGAAATGCTGGTCTTTTCTGGGGTTATGTTGCTGGCATCCCTTTTTTGGCTGAGC
GTCGGAACTTTTGTCAATCTCCATTCGCAGGAAGGAGGGGGCACAAGGCGGGTAATACTTAAAGCATCAGCATCGGTATT
GATGATGTTTTCTTGCGCTATATTATATTCAGGTGTTTCCAGCCTGCTGAGCTAA

Upstream 100 bases:

>100_bases
ATGCCTTGGGGACGTACGCGCGCGGACGGGGTCGAGTTGCGGGGCGCGCGGTGAGTGACCAGGTATTCAATGAATTTTTG
TCAAGTGAAATGTTGCTATT

Downstream 100 bases:

>100_bases
TACTATTGATGACCAATATGAGCTGGACAGCGGTTTGCACAACCGTCTGTAGCAGCAATCATACCCTCCATGAATTTCCC
CAAACTCCGAAGGATCACAC

Product: hypothetical protein

Products: NA

Alternate protein names: Amino Acid Efflux Pump; Threonine Efflux Protein; Lysine Exporter Protein LysE/YggA; CmaU Protein; Translocator Protein LysE Family; Amino-Acid Efflux System; LysE Type Translocator Family Protein

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MQGCDMHELLKVAIESAVLLFVPGPTNTLLLAAGVSKGFLKSAGLPLFELSGYVIAITFYSILIEYVSGNTGCLFFMKVF
CAGYISYMSCKTWKLSGNFLKATETILGINIFITTLFNPKAFIVSSIIFSVTLIDDPLLIAQEMLVFSGVMLLASLFWLS
VGTFVNLHSQEGGGTRRVILKASASVLMMFSCAILYSGVSSLLS

Sequences:

>Translated_204_residues
MQGCDMHELLKVAIESAVLLFVPGPTNTLLLAAGVSKGFLKSAGLPLFELSGYVIAITFYSILIEYVSGNTGCLFFMKVF
CAGYISYMSCKTWKLSGNFLKATETILGINIFITTLFNPKAFIVSSIIFSVTLIDDPLLIAQEMLVFSGVMLLASLFWLS
VGTFVNLHSQEGGGTRRVILKASASVLMMFSCAILYSGVSSLLS
>Mature_204_residues
MQGCDMHELLKVAIESAVLLFVPGPTNTLLLAAGVSKGFLKSAGLPLFELSGYVIAITFYSILIEYVSGNTGCLFFMKVF
CAGYISYMSCKTWKLSGNFLKATETILGINIFITTLFNPKAFIVSSIIFSVTLIDDPLLIAQEMLVFSGVMLLASLFWLS
VGTFVNLHSQEGGGTRRVILKASASVLMMFSCAILYSGVSSLLS

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22033; Mature: 22033

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGCDMHELLKVAIESAVLLFVPGPTNTLLLAAGVSKGFLKSAGLPLFELSGYVIAITFY
CCCCCHHHHHHHHHHCEEEEEECCCCCEEEEEECCCHHHHHHCCCCEEHHCCHHHHHHHH
SILIEYVSGNTGCLFFMKVFCAGYISYMSCKTWKLSGNFLKATETILGINIFITTLFNPK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHEEEEEEECCCH
AFIVSSIIFSVTLIDDPLLIAQEMLVFSGVMLLASLFWLSVGTFVNLHSQEGGGTRRVIL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEE
KASASVLMMFSCAILYSGVSSLLS
EHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQGCDMHELLKVAIESAVLLFVPGPTNTLLLAAGVSKGFLKSAGLPLFELSGYVIAITFY
CCCCCHHHHHHHHHHCEEEEEECCCCCEEEEEECCCHHHHHHCCCCEEHHCCHHHHHHHH
SILIEYVSGNTGCLFFMKVFCAGYISYMSCKTWKLSGNFLKATETILGINIFITTLFNPK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHEEEEEEECCCH
AFIVSSIIFSVTLIDDPLLIAQEMLVFSGVMLLASLFWLSVGTFVNLHSQEGGGTRRVIL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEE
KASASVLMMFSCAILYSGVSSLLS
EHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA