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The map label for this gene is yedA [H]

Identifier: 66047525

GI number: 66047525

Start: 5125227

End: 5126141

Strand: Reverse

Name: yedA [H]

Synonym: Psyr_4298

Alternate gene names: 66047525

Gene position: 5126141-5125227 (Counterclockwise)

Preceding gene: 66047527

Following gene: 66047524

Centisome position: 84.12

GC content: 63.83

Gene sequence:

>915_bases
ATGCCTCAGTCCGTCCGTGTTTCACCCTTGCTCATCGGTGCCTTTCTGGCCTTGTACCTGATCTGGGGCTCTACCTATCT
GGTGATCCGCATCGGCGTGGAATCATGGCCGCCGTTGATGATGGCGGGTGTGCGCTTTCTGATTGCCGGCTGCCTGATGT
ATGGCTTTCTGCGGTTTCGCGGCGTGCCTGCGCCGACCTGGCGCGAGTGGAAAGCCGCGTTCGTGATCGGCTTCCTGCTG
CTGGCCTGCGGTAATGGCGGTGTCACCCTGGCCGAACACGCAGGCGTCGCATCAGGCGTTGCCGCGTTGGCGGTGGCGAC
CATGCCGCTGTTTACCCTGCTGTTCGGCCTGTTCTGGGGCAATCGCACCACGAATCTTGAATGGGCAGGCATCGTGCTGG
GCCTGATCGGCATCGGCCTGCTGAACCTCGGCTCCAATTTGCAGGCCAGCCCTTATGGCGCCGCCGTGGTGATCTTTGCC
GCCGCAGCCTGGGCGTTCGGTTCGGTGCTGAGCAAGCACCTGCCGTTGCCGAAGGGTCCGATGGCCAGTGCGGCGGAAAT
GATCACGGCGGGGGCGACGCTGCTGATCGGCAGTGCCTTGAGTGGCGAGCGTCTGGCGCATATGCCGACGGCGGCGGGCT
GGGGCGCGCTGCTGTATCTGGTGGTATTCGGCTCTATCGTCGCGTTCAGCGCCTATATGTACCTGCTCAAGAACGTGCGC
CCGGCAGCGGCGACCAGCTACGCCTACGTCAATCCGGCCGTGGCAGTGATGCTCGGCGTGGTGTTCGCTGGCGAAACGAT
CGGTGTCGAAGAGTGCATGGCCATGGTGGTGATCATCAGTGCCGTGGTGCTGATTGGCCTGCCGCAATGGCGCCGGTCGC
CGCCGCCAGAGGTCGCATCGACACGCACAAGCTAA

Upstream 100 bases:

>100_bases
TCGTAAGTTTCAGCGCGTTTTAAACAGGTTTGTCTGCTTAATATACGCTTTCGGCCTTCATACAATAGGTCAACCATAAC
AATGATCCCAGAGCCTAGCC

Downstream 100 bases:

>100_bases
CCGAGGCGCGCCGGACAGGTTAAACTGCGCGCCTTGCGTTGAATCTTTCCTACGGTATTTCCATGACATTCGCCTCTCTC
GGCCTGATCGAACCCTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MPQSVRVSPLLIGAFLALYLIWGSTYLVIRIGVESWPPLMMAGVRFLIAGCLMYGFLRFRGVPAPTWREWKAAFVIGFLL
LACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGLFWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAAVVIFA
AAAWAFGSVLSKHLPLPKGPMASAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLKNVR
PAAATSYAYVNPAVAVMLGVVFAGETIGVEECMAMVVIISAVVLIGLPQWRRSPPPEVASTRTS

Sequences:

>Translated_304_residues
MPQSVRVSPLLIGAFLALYLIWGSTYLVIRIGVESWPPLMMAGVRFLIAGCLMYGFLRFRGVPAPTWREWKAAFVIGFLL
LACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGLFWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAAVVIFA
AAAWAFGSVLSKHLPLPKGPMASAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLKNVR
PAAATSYAYVNPAVAVMLGVVFAGETIGVEECMAMVVIISAVVLIGLPQWRRSPPPEVASTRTS
>Mature_303_residues
PQSVRVSPLLIGAFLALYLIWGSTYLVIRIGVESWPPLMMAGVRFLIAGCLMYGFLRFRGVPAPTWREWKAAFVIGFLLL
ACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGLFWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAAVVIFAA
AAWAFGSVLSKHLPLPKGPMASAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLKNVRP
AAATSYAYVNPAVAVMLGVVFAGETIGVEECMAMVVIISAVVLIGLPQWRRSPPPEVASTRTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=289, Percent_Identity=55.0173010380623, Blast_Score=261, Evalue=4e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31887; Mature: 31756

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQSVRVSPLLIGAFLALYLIWGSTYLVIRIGVESWPPLMMAGVRFLIAGCLMYGFLRFR
CCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GVPAPTWREWKAAFVIGFLLLACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGLFWG
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
NRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAAVVIFAAAAWAFGSVLSKHLPLPKGP
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
MASAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLKNVR
HHHHHHHHHHCHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAAATSYAYVNPAVAVMLGVVFAGETIGVEECMAMVVIISAVVLIGLPQWRRSPPPEVAS
CHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC
TRTS
CCCC
>Mature Secondary Structure 
PQSVRVSPLLIGAFLALYLIWGSTYLVIRIGVESWPPLMMAGVRFLIAGCLMYGFLRFR
CCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GVPAPTWREWKAAFVIGFLLLACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGLFWG
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
NRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAAVVIFAAAAWAFGSVLSKHLPLPKGP
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
MASAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLKNVR
HHHHHHHHHHCHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAAATSYAYVNPAVAVMLGVVFAGETIGVEECMAMVVIISAVVLIGLPQWRRSPPPEVAS
CHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC
TRTS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]