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The map label for this gene is dinG [H]

Identifier: 66047527

GI number: 66047527

Start: 5126781

End: 5127395

Strand: Reverse

Name: dinG [H]

Synonym: Psyr_4300

Alternate gene names: 66047527

Gene position: 5127395-5126781 (Counterclockwise)

Preceding gene: 66047528

Following gene: 66047525

Centisome position: 84.14

GC content: 62.6

Gene sequence:

>615_bases
GTGTTGGAACGTATTGCAGTCATCGACTTTGAAACCACCGGCATCTCCCCGGGCCATAGCTGCCGGGCGACCGAGATTGC
GGTGGTGATCATGGAGCAGGGGCGTATCGTCGAGCGCTTTCAGAGCCTGATGAATGCCGGCGTGCGTATTCCTGCGTTCA
TCGAAGGGTTGACCGGCATCAGTAACAACATGATTCGTACCGCCCCCAGCGCCGAGCGGGTGATGGGCGATGTGGCGGAT
TTCGTCGGTTCGACACCGCTGGTGGCGCACAACGCCTCGTTCGACCAGAAGTTCTGGGACTACGAGCTGTCGCGTATCCA
GCGCACGCGCGAACAGAGCTTCGCCTGTTCACTGCTGCTGGCCCGACGCCTGATGCCCGGCGCACCGAACCACAAGCTCG
GCACGTTGACCCGCTATGCGCGTCTGCCCGACACCGGCAAGGCTCACCGGGCGATGGCCGATGCGGAAATGGCGGCCAAC
CTGACCGCGCACCTGACCAACGAATTGCGCCAGACCCACGGCATCTCTGCCATCTCCCACCAGATGCTGTGTTCCCTGCA
GAAAGTCCCGGCCGCGAAGATCAGTGAAACCCTGAAGCGCCAGCGCGGCGTCTGA

Upstream 100 bases:

>100_bases
CGTGCCGGGGCTGACCGCGAACTCGTTGATCCGCGCCGCCAGTCGTTACGTGCCGATCGAAGGCGCGTTTTTGCTGAAAT
GAATTAACAGGGTCAGGCCA

Downstream 100 bases:

>100_bases
CCTGTCAGTGCTCCTGCTTGCCGTTGCTGATCAAGTAATCGCTCGGCAGGCTGCGCTCCACGGCTGTCGACAGCACGATT
GATGTCTTGCTGAAGCCAAA

Product: DNA polymerase III, epsilon subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLERIAVIDFETTGISPGHSCRATEIAVVIMEQGRIVERFQSLMNAGVRIPAFIEGLTGISNNMIRTAPSAERVMGDVAD
FVGSTPLVAHNASFDQKFWDYELSRIQRTREQSFACSLLLARRLMPGAPNHKLGTLTRYARLPDTGKAHRAMADAEMAAN
LTAHLTNELRQTHGISAISHQMLCSLQKVPAAKISETLKRQRGV

Sequences:

>Translated_204_residues
MLERIAVIDFETTGISPGHSCRATEIAVVIMEQGRIVERFQSLMNAGVRIPAFIEGLTGISNNMIRTAPSAERVMGDVAD
FVGSTPLVAHNASFDQKFWDYELSRIQRTREQSFACSLLLARRLMPGAPNHKLGTLTRYARLPDTGKAHRAMADAEMAAN
LTAHLTNELRQTHGISAISHQMLCSLQKVPAAKISETLKRQRGV
>Mature_204_residues
MLERIAVIDFETTGISPGHSCRATEIAVVIMEQGRIVERFQSLMNAGVRIPAFIEGLTGISNNMIRTAPSAERVMGDVAD
FVGSTPLVAHNASFDQKFWDYELSRIQRTREQSFACSLLLARRLMPGAPNHKLGTLTRYARLPDTGKAHRAMADAEMAAN
LTAHLTNELRQTHGISAISHQMLCSLQKVPAAKISETLKRQRGV

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR006054
- InterPro:   IPR006310
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 22469; Mature: 22469

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERIAVIDFETTGISPGHSCRATEIAVVIMEQGRIVERFQSLMNAGVRIPAFIEGLTGI
CCCCEEEEEEECCCCCCCCCCCHHHEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHCC
SNNMIRTAPSAERVMGDVADFVGSTPLVAHNASFDQKFWDYELSRIQRTREQSFACSLLL
CCCCEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRLMPGAPNHKLGTLTRYARLPDTGKAHRAMADAEMAANLTAHLTNELRQTHGISAISH
HHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QMLCSLQKVPAAKISETLKRQRGV
HHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLERIAVIDFETTGISPGHSCRATEIAVVIMEQGRIVERFQSLMNAGVRIPAFIEGLTGI
CCCCEEEEEEECCCCCCCCCCCHHHEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHCC
SNNMIRTAPSAERVMGDVADFVGSTPLVAHNASFDQKFWDYELSRIQRTREQSFACSLLL
CCCCEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRLMPGAPNHKLGTLTRYARLPDTGKAHRAMADAEMAANLTAHLTNELRQTHGISAISH
HHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QMLCSLQKVPAAKISETLKRQRGV
HHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]