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The map label for this gene is appB [H]

Identifier: 66047508

GI number: 66047508

Start: 5104595

End: 5105602

Strand: Reverse

Name: appB [H]

Synonym: Psyr_4281

Alternate gene names: 66047508

Gene position: 5105602-5104595 (Counterclockwise)

Preceding gene: 66047509

Following gene: 66047507

Centisome position: 83.78

GC content: 59.82

Gene sequence:

>1008_bases
ATGGGTATCGATCTTCCGCTGATCTGGGCCATCATCATCGTCTTCGGCATCATGATGTACGTGGTGATGGACGGTTTCGA
TCTGGGTATCGGGATTCTTTTCCCGTTCATGAAGGACAGTTCCGACCGCGACGTGATGATGAACACCGTCGCGCCGGTCT
GGGACGGCAACGAAACCTGGCTGGTGCTGGGCGGTGCGGCACTGTTCGGTGCATTCCCGCTGGCCTACTCGGTGGTCCTG
TCTGCGCTGTACCTGCCGCTGATGTTCATGCTCATGGGCCTGATTTTCCGTGGTGTGGCGTTCGAGTTCCGCTTCAAGGC
GACCGAGCTGAAGCGTCACTGGTGGGACAAGGCATTCATTGGCGGCTCGCTGGCTGCGACTTTCTTTCAGGGTGTGGCGC
TGGGTACCTACATTGAAGGCATCCCGGTGGTCGATCGCCAGTTTGCCGGTGGCTCGCTGGACTGGCTCTCGCCATTCCCG
ATGTTCTGCGGGCTGGCCTTGATCGTCGCTTACGCGCTGCTGGGCTGCACCTGGCTGATCATGAAAACCGAAGGCTCGCT
GCAGAAGGCGATGCATGATCTGGCGCGTCCGCTGGCCCTTGCGGTGCTCGCGGTCATGGGCGTGGTCAGCCTGTGGACGC
CGCTGGCCCACGCTGATATCGCGCATCGCTGGTTCAGCATGCCGAACCTGTTCTGGTTCATGCCGGTACCGATTCTGGTG
CTGGTGACCATGTACAGTCTGTTCAAGGCGGTGGCCCGCAATGCCCACTACACGCCGTTTCTACTGACCCTGTTGCTGAT
CTTCCTGGGTTACAGCGGTCTGGGCATCAGTTTGTGGCCAAACATCATTCCGCCTTCGGTATCGATCTGGACAGCCGCCG
CGCCGCCGCAGAGCCAGGGCTTCATGCTGGTGGGCACGCTGTTCATCATTCCGTTCATTCTGGGCTACACCTTCTGGAGC
TACTACGTGTTCCGCGGCAAGGTGACGGCAGCAGACGGTTATCACTAG

Upstream 100 bases:

>100_bases
TCCCGGCCAGCAACGCACACCGGCCCGTCCGCTCTCCGCTGCTGTTGAAGGCGAAGAAGATGGCGACAATCTTGACCGTC
ACGGCAAGGGGATTTAAGCC

Downstream 100 bases:

>100_bases
TCCGAACCGAGGAGAATGACGATGTCTGGTAAAAATTCCATGCACGATCCTGATCCGGCGCTGAGCAAGCCGCTCTGGCA
ACGACTGGCCTGGCTGGTCG

Product: cytochrome bd ubiquinol oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome bd-II oxidase subunit II [H]

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MGIDLPLIWAIIIVFGIMMYVVMDGFDLGIGILFPFMKDSSDRDVMMNTVAPVWDGNETWLVLGGAALFGAFPLAYSVVL
SALYLPLMFMLMGLIFRGVAFEFRFKATELKRHWWDKAFIGGSLAATFFQGVALGTYIEGIPVVDRQFAGGSLDWLSPFP
MFCGLALIVAYALLGCTWLIMKTEGSLQKAMHDLARPLALAVLAVMGVVSLWTPLAHADIAHRWFSMPNLFWFMPVPILV
LVTMYSLFKAVARNAHYTPFLLTLLLIFLGYSGLGISLWPNIIPPSVSIWTAAAPPQSQGFMLVGTLFIIPFILGYTFWS
YYVFRGKVTAADGYH

Sequences:

>Translated_335_residues
MGIDLPLIWAIIIVFGIMMYVVMDGFDLGIGILFPFMKDSSDRDVMMNTVAPVWDGNETWLVLGGAALFGAFPLAYSVVL
SALYLPLMFMLMGLIFRGVAFEFRFKATELKRHWWDKAFIGGSLAATFFQGVALGTYIEGIPVVDRQFAGGSLDWLSPFP
MFCGLALIVAYALLGCTWLIMKTEGSLQKAMHDLARPLALAVLAVMGVVSLWTPLAHADIAHRWFSMPNLFWFMPVPILV
LVTMYSLFKAVARNAHYTPFLLTLLLIFLGYSGLGISLWPNIIPPSVSIWTAAAPPQSQGFMLVGTLFIIPFILGYTFWS
YYVFRGKVTAADGYH
>Mature_334_residues
GIDLPLIWAIIIVFGIMMYVVMDGFDLGIGILFPFMKDSSDRDVMMNTVAPVWDGNETWLVLGGAALFGAFPLAYSVVLS
ALYLPLMFMLMGLIFRGVAFEFRFKATELKRHWWDKAFIGGSLAATFFQGVALGTYIEGIPVVDRQFAGGSLDWLSPFPM
FCGLALIVAYALLGCTWLIMKTEGSLQKAMHDLARPLALAVLAVMGVVSLWTPLAHADIAHRWFSMPNLFWFMPVPILVL
VTMYSLFKAVARNAHYTPFLLTLLLIFLGYSGLGISLWPNIIPPSVSIWTAAAPPQSQGFMLVGTLFIIPFILGYTFWSY
YVFRGKVTAADGYH

Specific function: Cytochrome oxidase subunit [H]

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli CydB [H]

Homologues:

Organism=Escherichia coli, GI1787213, Length=369, Percent_Identity=28.9972899728997, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1786954, Length=367, Percent_Identity=28.8828337874659, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003317 [H]

Pfam domain/function: PF02322 Cyto_ox_2 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 37188; Mature: 37057

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIDLPLIWAIIIVFGIMMYVVMDGFDLGIGILFPFMKDSSDRDVMMNTVAPVWDGNETW
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEE
LVLGGAALFGAFPLAYSVVLSALYLPLMFMLMGLIFRGVAFEFRFKATELKRHWWDKAFI
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHC
GGSLAATFFQGVALGTYIEGIPVVDRQFAGGSLDWLSPFPMFCGLALIVAYALLGCTWLI
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE
MKTEGSLQKAMHDLARPLALAVLAVMGVVSLWTPLAHADIAHRWFSMPNLFWFMPVPILV
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LVTMYSLFKAVARNAHYTPFLLTLLLIFLGYSGLGISLWPNIIPPSVSIWTAAAPPQSQG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEECCCCCCCCC
FMLVGTLFIIPFILGYTFWSYYVFRGKVTAADGYH
CHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC
>Mature Secondary Structure 
GIDLPLIWAIIIVFGIMMYVVMDGFDLGIGILFPFMKDSSDRDVMMNTVAPVWDGNETW
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEE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CHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658595; 8905232; 9278503; 8626304 [H]