| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is rlmG [H]
Identifier: 66047506
GI number: 66047506
Start: 5103190
End: 5104314
Strand: Direct
Name: rlmG [H]
Synonym: Psyr_4279
Alternate gene names: 66047506
Gene position: 5103190-5104314 (Clockwise)
Preceding gene: 66047505
Following gene: 66047513
Centisome position: 83.75
GC content: 63.91
Gene sequence:
>1125_bases ATGCCCCTGCTCATCAGTCCCTTCGCTGAACTTGATCTCATTCGCCAACCCGAGCAACAGGATGAGCCCCTGCAGGCATT CGATGCCGCCGACGAGTACCTGCTCAATCATGTTGCACAGGCAGGGCTCAGCCTGCCCAGCCGGGTTCTGGTGCTCAATG ACAGTTTCGGCGCGCTGGCGGCGAGTCTCGCGCCGCATGCCACGGTGATCAGCAGTACCGACTCGTTTCTGGCGGCGCAG GCGCTGGAAAAGAATCTGGCGCGCAACGGCATGAGCTACGACGCAGTACCGCACATCCCGGCCAGCGAAGCGTTGCAGGG GCCCTTCGACTGGGTGCTGATCCGGGTGCCCAAGACCCTGGCGCTGCTGGAAGAGCAACTGATACGCCTGCAAGGCCAGC TGGCCCCCGGCGCTCGGGTCATTGCTGCGGCAATGGTCAAGCATTTGCCGCGTTCGGCGGGCGACTTGCTGGAGGAATAT GTAGGGCCGGTGCAGGCCTCGCTGGCAGTGAAAAAAGCCAGGCTGCTGTTCGCCACGCCACAGCCCATGGAAGTGCGCAC CTCGCCCTATCCGACGCGCTACCGGCTGGAGGAGCCGGCCATCGAACTGCTCAACCATGCCAATGTGTTTTGCCGCGACG GGCTGGACATCGGCACTCGCGCCTTCCTGCCGCATCTGCCGAAAAACCTTGGCACGGCAAGGGTCGCAGACCTGGGTTGC GGCAACGGCGTACTGGCCATTGCCAGCGCGCTGGACAACCCGCAAGCGCACTACACGCTGGTCGACGAGTCGTTCATGGC CGTGAAATCGGCAGCCGAGAACTGGCGCGCGACGCTGGGTGATCGCGACGTCCGGGTTCGGGCTGGCGACGGTCTGGAGA TGCAGGAGCCTGACTCGCTGGATGTGGTGCTGTGCAATCCGCCCTTCCACCAGCAGCAAGTGGTCGGCGACTTTCTCGCC TGGCGGATGTTTCTGCAGGCGCGTGCCGCGCTGGTGACCGGCGGGGCGCTGTACATCGTCGGCAATCGCCACCTGGGTTA TCACACCAAGCTGTCGCGCCTGTTCCGCGGCGTCGAACAAGTGGCCGCCACGCCGAAATTCGTGATTCTGAAAGCCCGCA AGTAA
Upstream 100 bases:
>100_bases GGTATCGAAACGAAAAAATACGTAAAATCGTTTGTCTCAGCGAGCCCACCTGTCATCGGGCTCACTGACATACCTTCGAT TGCACAGAGTTCTCCCGCCA
Downstream 100 bases:
>100_bases CCCACGCTCACGACAAAAAAAAGACCCCCTTGCCACGCGAGTGGCAAGAGGGTCGCAAAACGTGTCCGCAGACACGAACG GGAATTCAGTATCAGTGTGT
Product: rRNA (guanine-N(2)-)-methyltransferase
Products: NA
Alternate protein names: 23S rRNA m2G1835 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rlmG [H]
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MPLLISPFAELDLIRQPEQQDEPLQAFDAADEYLLNHVAQAGLSLPSRVLVLNDSFGALAASLAPHATVISSTDSFLAAQ ALEKNLARNGMSYDAVPHIPASEALQGPFDWVLIRVPKTLALLEEQLIRLQGQLAPGARVIAAAMVKHLPRSAGDLLEEY VGPVQASLAVKKARLLFATPQPMEVRTSPYPTRYRLEEPAIELLNHANVFCRDGLDIGTRAFLPHLPKNLGTARVADLGC GNGVLAIASALDNPQAHYTLVDESFMAVKSAAENWRATLGDRDVRVRAGDGLEMQEPDSLDVVLCNPPFHQQQVVGDFLA WRMFLQARAALVTGGALYIVGNRHLGYHTKLSRLFRGVEQVAATPKFVILKARK
Sequences:
>Translated_374_residues MPLLISPFAELDLIRQPEQQDEPLQAFDAADEYLLNHVAQAGLSLPSRVLVLNDSFGALAASLAPHATVISSTDSFLAAQ ALEKNLARNGMSYDAVPHIPASEALQGPFDWVLIRVPKTLALLEEQLIRLQGQLAPGARVIAAAMVKHLPRSAGDLLEEY VGPVQASLAVKKARLLFATPQPMEVRTSPYPTRYRLEEPAIELLNHANVFCRDGLDIGTRAFLPHLPKNLGTARVADLGC GNGVLAIASALDNPQAHYTLVDESFMAVKSAAENWRATLGDRDVRVRAGDGLEMQEPDSLDVVLCNPPFHQQQVVGDFLA WRMFLQARAALVTGGALYIVGNRHLGYHTKLSRLFRGVEQVAATPKFVILKARK >Mature_373_residues PLLISPFAELDLIRQPEQQDEPLQAFDAADEYLLNHVAQAGLSLPSRVLVLNDSFGALAASLAPHATVISSTDSFLAAQA LEKNLARNGMSYDAVPHIPASEALQGPFDWVLIRVPKTLALLEEQLIRLQGQLAPGARVIAAAMVKHLPRSAGDLLEEYV GPVQASLAVKKARLLFATPQPMEVRTSPYPTRYRLEEPAIELLNHANVFCRDGLDIGTRAFLPHLPKNLGTARVADLGCG NGVLAIASALDNPQAHYTLVDESFMAVKSAAENWRATLGDRDVRVRAGDGLEMQEPDSLDVVLCNPPFHQQQVVGDFLAW RMFLQARAALVTGGALYIVGNRHLGYHTKLSRLFRGVEQVAATPKFVILKARK
Specific function: Specifically methylates the guanosine in position 1835 (m2G1835) of 23S rRNA [H]
COG id: COG2813
COG function: function code J; 16S RNA G1207 methylase RsmC
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RlmG family [H]
Homologues:
Organism=Escherichia coli, GI87082206, Length=377, Percent_Identity=42.1750663129974, Blast_Score=265, Evalue=4e-72, Organism=Escherichia coli, GI1790830, Length=353, Percent_Identity=28.328611898017, Blast_Score=85, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR017237 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: =2.1.1.174 [H]
Molecular weight: Translated: 40736; Mature: 40605
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLISPFAELDLIRQPEQQDEPLQAFDAADEYLLNHVAQAGLSLPSRVLVLNDSFGALA CCEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHH ASLAPHATVISSTDSFLAAQALEKNLARNGMSYDAVPHIPASEALQGPFDWVLIRVPKTL HHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEECCHHH ALLEEQLIRLQGQLAPGARVIAAAMVKHLPRSAGDLLEEYVGPVQASLAVKKARLLFATP HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHEEEECC QPMEVRTSPYPTRYRLEEPAIELLNHANVFCRDGLDIGTRAFLPHLPKNLGTARVADLGC CCCCCCCCCCCCCEECCHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCCCCCHHHHCCC GNGVLAIASALDNPQAHYTLVDESFMAVKSAAENWRATLGDRDVRVRAGDGLEMQEPDSL CCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC DVVLCNPPFHQQQVVGDFLAWRMFLQARAALVTGGALYIVGNRHLGYHTKLSRLFRGVEQ EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCHHHHHHHHHHHHHH VAATPKFVILKARK HHCCCCEEEEEECC >Mature Secondary Structure PLLISPFAELDLIRQPEQQDEPLQAFDAADEYLLNHVAQAGLSLPSRVLVLNDSFGALA CEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHH ASLAPHATVISSTDSFLAAQALEKNLARNGMSYDAVPHIPASEALQGPFDWVLIRVPKTL HHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEECCHHH ALLEEQLIRLQGQLAPGARVIAAAMVKHLPRSAGDLLEEYVGPVQASLAVKKARLLFATP HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHEEEECC QPMEVRTSPYPTRYRLEEPAIELLNHANVFCRDGLDIGTRAFLPHLPKNLGTARVADLGC CCCCCCCCCCCCCEECCHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCCCCCHHHHCCC GNGVLAIASALDNPQAHYTLVDESFMAVKSAAENWRATLGDRDVRVRAGDGLEMQEPDSL CCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC DVVLCNPPFHQQQVVGDFLAWRMFLQARAALVTGGALYIVGNRHLGYHTKLSRLFRGVEQ EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCHHHHHHHHHHHHHH VAATPKFVILKARK HHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA