| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is PhcA
Identifier: 66047460
GI number: 66047460
Start: 5041254
End: 5042810
Strand: Direct
Name: PhcA
Synonym: Psyr_4233
Alternate gene names: NA
Gene position: 5041254-5042810 (Clockwise)
Preceding gene: 66047459
Following gene: 66047461
Centisome position: 82.73
GC content: 58.7
Gene sequence:
>1557_bases ATGAATCCCCCGCATAACGCTTCCCGCAACCCTGCCACTGTCAACGATCAGGACATGAATACCCATCGCGAACCGCTTCC AACCCCCTTGAGATTCGAAGCCGGTGATGGCGACAAACACAAACATACCCATGGCGCTATCGAAGCCGTTCTCGAATCTG CAGGTTTCAGGCCTGAGGAAATCCGCGCGATCTATTTCGGCAACTGGCTGCGCGACTACTCGCAGTTGCTTGATCCGAAA ATCGTCAGGGCGACAAGCATGCCGAAAAGCTTCCCTGACCTGCTTTCCCGTGACGCACTGACGCGCATTGTGGACGTGCT GGCAGTCAAGGAATTCACCGATCTGATGAAGGCAGACCGCTCGCGCTTCGTCGTGACCGCAGAGCGCCTCGGCGTCTATC GTCCTGCTGAACACATCGACAACCCCAGAACCCCCGACCCCAAACCGGCCAATCCAAAAGAACGCGACGCCGACTTCGAC GCCTGGGTGCTGCCTGACGATCCGCTATTGAAGGTCGACCCTGACACCTCGATGAAACGCTACATTCAGCGCTCGGTGGA GGTGATGGCTGCGGGGCTGGAATCGGCCGTCAATGGCGGCCCCGGCTCTACAGACGGTTTGCGCGACATGGGCGCGGCGC TGCACATTCTCGAAGACTTCTTCGCCCACTCCAACTTCGCCGAACTCAGCCTGATCAAACTCGGCCATGAGCGCATTCTG CCCTGGACGTCCGAAGCAGACTGCAAGCACCGTCTGCCGCTGGTAACCGGTACGTTCGGTGGCAGCGATATCATCGCCAG CCTCGCTGAGCCGCTTGGCAGGATTCTGTTCTCGACAGACGAAAAACCGTTCGAAGCGATCAAGGCTGGAGAACGTTACG AGCGCGACCAGATTATTCAGATCGTTCTGGGCGAGCACCCTGATCCGCGACTGCTCACGGGTTACGAAGCCTTTCTCGAA GCGCGGGACCAGTGGGCCAGCCAGCCGTTCTCCGAACAGGTCGAACAGTTCTACGCCTTCGTCGGTACGCCGGGGCGATT GCTTGGCAATGCATTTGGCACCGTCATGCAAAGTCTGGCCATCTGGCTTGGCAACAGCGTCGACGACCTGCAGACCCTGC TCGACGAAGACCCCAATAGCAGCGGCTCGACCGATCCGTCACATTCGCAACTGGCCAAGGATCATGCGCAGCACCCGCTG CATGTGCTTGCCGCAACCCTCGCCAGAAAAGCCGTGCTGCAAGTAGGTCAGGCCGTTCTGGGCCAATGGCATGGCAAGGA AGGCGCCGAACATCCGGTCCGGGTAGCCACGCGGTTCTTCACTCATCCCATGGACTGCGACTGGCAGGACGCGATTGTCC GGGAATGGGCCGAGGCCAATCCAGAACAGGTCGAGCGGGCGACACTCAAGAGCGAGCTGGACCAGTCCAGAATCCAATTG CAGCAAAGCACGAAAAAGGACTTGCAGCGTTTTAGTCAGGACGGCAGCAATTTTCTGGACGTGTTTTTTGAAAGTGTGTC GCTGGCAGACCTTTGGGCGAGGATTACCGGCAAGTAA
Upstream 100 bases:
>100_bases GGTAATCTCGCGGCTCGCGAAACTTGCCATCTCACTTCCGAGCACTATCGCCTTGGCTGAGCGAACCGGCCAACGCGCGC TTGCCATCAAGGAATCAAGG
Downstream 100 bases:
>100_bases GCGTATTGTCCGACCCCGACCAAGTACGGCACTATCCGTTGTCTAGCTGATTGTCGACTTTCAAGCACGGTTACTGCCGT ACCACGCGAGGGATCCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MNPPHNASRNPATVNDQDMNTHREPLPTPLRFEAGDGDKHKHTHGAIEAVLESAGFRPEEIRAIYFGNWLRDYSQLLDPK IVRATSMPKSFPDLLSRDALTRIVDVLAVKEFTDLMKADRSRFVVTAERLGVYRPAEHIDNPRTPDPKPANPKERDADFD AWVLPDDPLLKVDPDTSMKRYIQRSVEVMAAGLESAVNGGPGSTDGLRDMGAALHILEDFFAHSNFAELSLIKLGHERIL PWTSEADCKHRLPLVTGTFGGSDIIASLAEPLGRILFSTDEKPFEAIKAGERYERDQIIQIVLGEHPDPRLLTGYEAFLE ARDQWASQPFSEQVEQFYAFVGTPGRLLGNAFGTVMQSLAIWLGNSVDDLQTLLDEDPNSSGSTDPSHSQLAKDHAQHPL HVLAATLARKAVLQVGQAVLGQWHGKEGAEHPVRVATRFFTHPMDCDWQDAIVREWAEANPEQVERATLKSELDQSRIQL QQSTKKDLQRFSQDGSNFLDVFFESVSLADLWARITGK
Sequences:
>Translated_518_residues MNPPHNASRNPATVNDQDMNTHREPLPTPLRFEAGDGDKHKHTHGAIEAVLESAGFRPEEIRAIYFGNWLRDYSQLLDPK IVRATSMPKSFPDLLSRDALTRIVDVLAVKEFTDLMKADRSRFVVTAERLGVYRPAEHIDNPRTPDPKPANPKERDADFD AWVLPDDPLLKVDPDTSMKRYIQRSVEVMAAGLESAVNGGPGSTDGLRDMGAALHILEDFFAHSNFAELSLIKLGHERIL PWTSEADCKHRLPLVTGTFGGSDIIASLAEPLGRILFSTDEKPFEAIKAGERYERDQIIQIVLGEHPDPRLLTGYEAFLE ARDQWASQPFSEQVEQFYAFVGTPGRLLGNAFGTVMQSLAIWLGNSVDDLQTLLDEDPNSSGSTDPSHSQLAKDHAQHPL HVLAATLARKAVLQVGQAVLGQWHGKEGAEHPVRVATRFFTHPMDCDWQDAIVREWAEANPEQVERATLKSELDQSRIQL QQSTKKDLQRFSQDGSNFLDVFFESVSLADLWARITGK >Mature_518_residues MNPPHNASRNPATVNDQDMNTHREPLPTPLRFEAGDGDKHKHTHGAIEAVLESAGFRPEEIRAIYFGNWLRDYSQLLDPK IVRATSMPKSFPDLLSRDALTRIVDVLAVKEFTDLMKADRSRFVVTAERLGVYRPAEHIDNPRTPDPKPANPKERDADFD AWVLPDDPLLKVDPDTSMKRYIQRSVEVMAAGLESAVNGGPGSTDGLRDMGAALHILEDFFAHSNFAELSLIKLGHERIL PWTSEADCKHRLPLVTGTFGGSDIIASLAEPLGRILFSTDEKPFEAIKAGERYERDQIIQIVLGEHPDPRLLTGYEAFLE ARDQWASQPFSEQVEQFYAFVGTPGRLLGNAFGTVMQSLAIWLGNSVDDLQTLLDEDPNSSGSTDPSHSQLAKDHAQHPL HVLAATLARKAVLQVGQAVLGQWHGKEGAEHPVRVATRFFTHPMDCDWQDAIVREWAEANPEQVERATLKSELDQSRIQL QQSTKKDLQRFSQDGSNFLDVFFESVSLADLWARITGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57828; Mature: 57828
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPPHNASRNPATVNDQDMNTHREPLPTPLRFEAGDGDKHKHTHGAIEAVLESAGFRPEE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHH IRAIYFGNWLRDYSQLLDPKIVRATSMPKSFPDLLSRDALTRIVDVLAVKEFTDLMKADR HHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SRFVVTAERLGVYRPAEHIDNPRTPDPKPANPKERDADFDAWVLPDDPLLKVDPDTSMKR CCEEEEHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHH YIQRSVEVMAAGLESAVNGGPGSTDGLRDMGAALHILEDFFAHSNFAELSLIKLGHERIL HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHCC PWTSEADCKHRLPLVTGTFGGSDIIASLAEPLGRILFSTDEKPFEAIKAGERYERDQIIQ CCCCCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCHHHHHH IVLGEHPDPRLLTGYEAFLEARDQWASQPFSEQVEQFYAFVGTPGRLLGNAFGTVMQSLA HHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IWLGNSVDDLQTLLDEDPNSSGSTDPSHSQLAKDHAQHPLHVLAATLARKAVLQVGQAVL HHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GQWHGKEGAEHPVRVATRFFTHPMDCDWQDAIVREWAEANPEQVERATLKSELDQSRIQL HHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH QQSTKKDLQRFSQDGSNFLDVFFESVSLADLWARITGK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNPPHNASRNPATVNDQDMNTHREPLPTPLRFEAGDGDKHKHTHGAIEAVLESAGFRPEE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHH IRAIYFGNWLRDYSQLLDPKIVRATSMPKSFPDLLSRDALTRIVDVLAVKEFTDLMKADR HHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SRFVVTAERLGVYRPAEHIDNPRTPDPKPANPKERDADFDAWVLPDDPLLKVDPDTSMKR CCEEEEHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHH YIQRSVEVMAAGLESAVNGGPGSTDGLRDMGAALHILEDFFAHSNFAELSLIKLGHERIL HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHCC PWTSEADCKHRLPLVTGTFGGSDIIASLAEPLGRILFSTDEKPFEAIKAGERYERDQIIQ CCCCCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCHHHHHH IVLGEHPDPRLLTGYEAFLEARDQWASQPFSEQVEQFYAFVGTPGRLLGNAFGTVMQSLA HHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IWLGNSVDDLQTLLDEDPNSSGSTDPSHSQLAKDHAQHPLHVLAATLARKAVLQVGQAVL HHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GQWHGKEGAEHPVRVATRFFTHPMDCDWQDAIVREWAEANPEQVERATLKSELDQSRIQL HHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH QQSTKKDLQRFSQDGSNFLDVFFESVSLADLWARITGK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA