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The map label for this gene is yfdV [C]

Identifier: 66047397

GI number: 66047397

Start: 4959318

End: 4960268

Strand: Reverse

Name: yfdV [C]

Synonym: Psyr_4170

Alternate gene names: 66047397

Gene position: 4960268-4959318 (Counterclockwise)

Preceding gene: 66047398

Following gene: 66047390

Centisome position: 81.4

GC content: 59.83

Gene sequence:

>951_bases
ATGCGTTGCATGCTGGCTATTTTTCTCGAAACCCTGAACATCACCGCCCCGGTGTTTGCCATGCTGTTTCTGGGCGTGTT
CCTCAGGCGTATCGGCGCGATCAATGATGGCTTCATCGTTGCGGCTTCCGGGCTGGTGTTCAACGTCACCATGCCTGCGC
TGCTGTTTCTGGGCATTATTCACGCCGACCTGCGCACCGCCCTGCAGCCCAAGCTGCTGATTTTTTTCAGCATCGCTACG
CTCCTGAGTTTTGCATTCGCCTGGTGCTGGGCGATCTGGCGTTGCCCGCACGAAGAGCGCGGGATCTACGTCCAGGGCGC
GTTTCGTGGCAATAACGGGGTCATCGGTCTGGCCCTGGCGGCCAGCATGTACGGGCCTGATGGCATTTCACTGGGCGCGA
TTCTCGCCGCGCTGGTCATCGTCTTCTACAACACGTTATCGACGGTGGTATTGGCGGTTTACAGCCCGGTGATCAAGTCC
GATCCCTGGAGCATCTTCAAAAGCGTGCTGGCCAACCCGCTGATCATCAGCGTGATCATCGCCTCGCCCTTCGCTTACTT
TGCCATCGGCCTGCCCAAATGGCTGGAAACCTCCGGCAGCTATCTTGCACAGATGACCCTGCCGCTGGCACTGATCTGCA
TCGGTGGCACGCTGTCGCTGGCGTCGTTGCGCAAGAGTGGAAAACTGGCTGTCAGCGCCAGCGTCATGAAGATGATCACG
CTGCCAGTGCTGTGCACGCTGGCCGCCTGGCTGGCCGGTTTTCGCGGCGCTGAACTGGGGATTCTGTTCCTGTATTTCGG
CAGCCCGACAGCGGCTGCCAGCTACATCATGGCGCGCACGGCCAACGGCAACTACGAGCTGGCTGCCGCGATCATTGTCA
TCACCACGCTGGCTGCCGCGGTCACGACCAACGTGGGGATTTTCATCCTGCAATGGGGCGGCTGGATCTAA

Upstream 100 bases:

>100_bases
GATGAACAACAGACGCGGCGCGGTGATCAGGGTTTCGGAAATTCCGTGCAACATGCTCGTCCTCGGTGGCCTATCATGAG
CTACCTAACGACGGGACCGG

Downstream 100 bases:

>100_bases
TCCGCTTTGACGTAGCTGTCGATCACTTCCTGCGCCGCACGAAACGCGTCGATGGCCGCTGGCACGCCGGCGTACACCGC
GCAGTGCAGCAGCGCTTCGC

Product: auxin efflux carrier

Products: NA

Alternate protein names: Permease; Malonate Transporter; Transporter AEC Family; Auxin Efflux Carrier Family Protein; Transporter Auxin Efflux Carrier Family; Transporter Auxin Efflux Carrier Family Protein; AEC Family Transporter; Membrane Transporter; AEC Family Malonate Efflux Carrier; Transporter Of Auxin Efflux Carrier Family; Membrane Transport Protein Auxin Efflux Carrier; Permease Transmembrane Protein; Membrane Transport Protein Family Transporter; Efflux Protein; Auxin Efflux Carrier Protein

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MRCMLAIFLETLNITAPVFAMLFLGVFLRRIGAINDGFIVAASGLVFNVTMPALLFLGIIHADLRTALQPKLLIFFSIAT
LLSFAFAWCWAIWRCPHEERGIYVQGAFRGNNGVIGLALAASMYGPDGISLGAILAALVIVFYNTLSTVVLAVYSPVIKS
DPWSIFKSVLANPLIISVIIASPFAYFAIGLPKWLETSGSYLAQMTLPLALICIGGTLSLASLRKSGKLAVSASVMKMIT
LPVLCTLAAWLAGFRGAELGILFLYFGSPTAAASYIMARTANGNYELAAAIIVITTLAAAVTTNVGIFILQWGGWI

Sequences:

>Translated_316_residues
MRCMLAIFLETLNITAPVFAMLFLGVFLRRIGAINDGFIVAASGLVFNVTMPALLFLGIIHADLRTALQPKLLIFFSIAT
LLSFAFAWCWAIWRCPHEERGIYVQGAFRGNNGVIGLALAASMYGPDGISLGAILAALVIVFYNTLSTVVLAVYSPVIKS
DPWSIFKSVLANPLIISVIIASPFAYFAIGLPKWLETSGSYLAQMTLPLALICIGGTLSLASLRKSGKLAVSASVMKMIT
LPVLCTLAAWLAGFRGAELGILFLYFGSPTAAASYIMARTANGNYELAAAIIVITTLAAAVTTNVGIFILQWGGWI
>Mature_316_residues
MRCMLAIFLETLNITAPVFAMLFLGVFLRRIGAINDGFIVAASGLVFNVTMPALLFLGIIHADLRTALQPKLLIFFSIAT
LLSFAFAWCWAIWRCPHEERGIYVQGAFRGNNGVIGLALAASMYGPDGISLGAILAALVIVFYNTLSTVVLAVYSPVIKS
DPWSIFKSVLANPLIISVIIASPFAYFAIGLPKWLETSGSYLAQMTLPLALICIGGTLSLASLRKSGKLAVSASVMKMIT
LPVLCTLAAWLAGFRGAELGILFLYFGSPTAAASYIMARTANGNYELAAAIIVITTLAAAVTTNVGIFILQWGGWI

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33740; Mature: 33740

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCMLAIFLETLNITAPVFAMLFLGVFLRRIGAINDGFIVAASGLVFNVTMPALLFLGII
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHHHHHH
HADLRTALQPKLLIFFSIATLLSFAFAWCWAIWRCPHEERGIYVQGAFRGNNGVIGLALA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEHHHHH
ASMYGPDGISLGAILAALVIVFYNTLSTVVLAVYSPVIKSDPWSIFKSVLANPLIISVII
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHH
ASPFAYFAIGLPKWLETSGSYLAQMTLPLALICIGGTLSLASLRKSGKLAVSASVMKMIT
HCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHHH
LPVLCTLAAWLAGFRGAELGILFLYFGSPTAAASYIMARTANGNYELAAAIIVITTLAAA
HHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHEEECCCCHHHHHHHHHHHHHHHH
VTTNVGIFILQWGGWI
HHCCCCEEEEECCCCC
>Mature Secondary Structure
MRCMLAIFLETLNITAPVFAMLFLGVFLRRIGAINDGFIVAASGLVFNVTMPALLFLGII
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHHHHHH
HADLRTALQPKLLIFFSIATLLSFAFAWCWAIWRCPHEERGIYVQGAFRGNNGVIGLALA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEHHHHH
ASMYGPDGISLGAILAALVIVFYNTLSTVVLAVYSPVIKSDPWSIFKSVLANPLIISVII
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHH
ASPFAYFAIGLPKWLETSGSYLAQMTLPLALICIGGTLSLASLRKSGKLAVSASVMKMIT
HCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHHH
LPVLCTLAAWLAGFRGAELGILFLYFGSPTAAASYIMARTANGNYELAAAIIVITTLAAA
HHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHEEECCCCHHHHHHHHHHHHHHHH
VTTNVGIFILQWGGWI
HHCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA