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The map label for this gene is ybaZ [H]

Identifier: 66047304

GI number: 66047304

Start: 4860519

End: 4860875

Strand: Direct

Name: ybaZ [H]

Synonym: Psyr_4077

Alternate gene names: 66047304

Gene position: 4860519-4860875 (Clockwise)

Preceding gene: 66047302

Following gene: 66047305

Centisome position: 79.76

GC content: 63.03

Gene sequence:

>357_bases
GTGACAGATCCGGACTTAACATTACCTTACCCAGCGGGACAATCGCCAAACGAGGCGCGACGCACCGCCCTTTACCTGAC
GATGGCGCAGATACCCGAAGGCAAAGTGGTCGCCTACGGGCAACTTGCCGAACTAGCAGGCCTGGGCCGAGCGGCACGCT
GGGTGGGGCGTACCTTGAGCCAGTTGCCGGACGGTTCTTCCCTGCCGTGGCACCGGGTTCTGGGGGCTGGCGGTCGGCTC
AGTCTGCCGCCTGGCAGCGTTTCCGGCGACGAACAACGGGCACGTTTACGCGCCGAGGGCGTTACCATTGTGAATAATCG
GGTTGATATGCAGCGCCATGGCTGGCGTCCCCTATAG

Upstream 100 bases:

>100_bases
GGGGCGATCCATGTACCACCAAGCACGGTGGTAACAGACAGCCCGTTTCACCGAAAGTTCAGCGAACGACAATCAATAGC
GTTTTATACAGGATTATCGC

Downstream 100 bases:

>100_bases
CACAGCGGTTAGAGTGCGCCCTTTGTTTTCGTAACCTGAGGCAGATTCCAGCCCATGCCCCGTAAAACCTGGCGCGCCGC
GCTCGCCGCATATGCCAGCC

Product: methylated-DNA-[protein]-cysteine S-methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTDPDLTLPYPAGQSPNEARRTALYLTMAQIPEGKVVAYGQLAELAGLGRAARWVGRTLSQLPDGSSLPWHRVLGAGGRL
SLPPGSVSGDEQRARLRAEGVTIVNNRVDMQRHGWRPL

Sequences:

>Translated_118_residues
MTDPDLTLPYPAGQSPNEARRTALYLTMAQIPEGKVVAYGQLAELAGLGRAARWVGRTLSQLPDGSSLPWHRVLGAGGRL
SLPPGSVSGDEQRARLRAEGVTIVNNRVDMQRHGWRPL
>Mature_117_residues
TDPDLTLPYPAGQSPNEARRTALYLTMAQIPEGKVVAYGQLAELAGLGRAARWVGRTLSQLPDGSSLPWHRVLGAGGRLS
LPPGSVSGDEQRARLRAEGVTIVNNRVDMQRHGWRPL

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MGMT family [H]

Homologues:

Organism=Escherichia coli, GI1786659, Length=93, Percent_Identity=46.2365591397849, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014048
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01035 DNA_binding_1 [H]

EC number: NA

Molecular weight: Translated: 12781; Mature: 12650

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPDLTLPYPAGQSPNEARRTALYLTMAQIPEGKVVAYGQLAELAGLGRAARWVGRTLS
CCCCCCCCCCCCCCCCCHHHHEEHEEEECCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHH
QLPDGSSLPWHRVLGAGGRLSLPPGSVSGDEQRARLRAEGVTIVNNRVDMQRHGWRPL
HCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEECCCCCHHCCCCCCC
>Mature Secondary Structure 
TDPDLTLPYPAGQSPNEARRTALYLTMAQIPEGKVVAYGQLAELAGLGRAARWVGRTLS
CCCCCCCCCCCCCCCCHHHHEEHEEEECCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHH
QLPDGSSLPWHRVLGAGGRLSLPPGSVSGDEQRARLRAEGVTIVNNRVDMQRHGWRPL
HCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEECCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]