| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fabG [H]
Identifier: 66047302
GI number: 66047302
Start: 4858540
End: 4859298
Strand: Direct
Name: fabG [H]
Synonym: Psyr_4075
Alternate gene names: 66047302
Gene position: 4858540-4859298 (Clockwise)
Preceding gene: 66047298
Following gene: 66047304
Centisome position: 79.73
GC content: 59.29
Gene sequence:
>759_bases ATGGAATTGAAAGACAAGCTGATAATCATCACCGGCGGCTGCCAGGGGCTGGGCAGAGCCATGGCCGAATACCTGGCCGG CAAAGGCGCCAACCTGGCGCTGCTGGACCTCAATCAGGAGAAACTCGATCAGGCTGTAGCCGCCTGTGAGGCACTCGGGG TCAAGGCTAGCGCCTATCTGTGCAATGTTGCCAATGAAGAACAGGTCGTCGACACGGTCAGCAAGGTCGCCGAGGATTTC GGCGCCATTCATGGCTTGGTCAACAACGCTGGCATTCTGCGTGACGGCCTGCTGGTCAAGGTCAAGGATGGCGAGATGAC CAAACTGAGCCTCGCGCAATGGCAGGCGGTGATTGACGTCAATCTGACCGGCGTCTTCCTCTGCACCCGCGAAGTGGCGG CGAAAATGATCGAGCAGAAGAGTCAGGGCGCGATCATCAATATCTCGTCGATTTCACGTGCAGGGAATATCGGACAGACC AACTACTCGGCAGCCAAGGCCGGTGTGGCGGCTGCGACGGTTACCTGGGCAAGGGAACTGGCCCGCTACGGCATCCGTGT GGCAGGCGTGGCGCCGGGGTTCATTGAAACCGAAATGACCGGCAGCATGCGCCCCGAAGCCCTCGAGAAGATGACCTCGG CGATCCCGCTCAAGCGCATGGGCAGGCCGGACGAGATTGCACACTCGGTGGCTTATATTCTGGAAAACGATTATTTCAGC GGACGCATCCTGGAGCTGGATGGCGCGATGCGGATCTAG
Upstream 100 bases:
>100_bases AACGCGCAAAAACAGCCTATAACGTGCTCTGGCTATGGCATAAGCACTCGCAACCCGCCAGTGATGCCATGGAAACGATC AACTGTGATTGGGCACGCAT
Downstream 100 bases:
>100_bases TCAGCCCGTAAAAGCAGCAGGCGACGCACAGGGTGTGCGTCGCCTGCCCTTCGCTTACCAGCTTACGCCGAAGCCAGCGG TGTAGCGCGTCTTGTCGACA
Product: 3-ketoacyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MELKDKLIIITGGCQGLGRAMAEYLAGKGANLALLDLNQEKLDQAVAACEALGVKASAYLCNVANEEQVVDTVSKVAEDF GAIHGLVNNAGILRDGLLVKVKDGEMTKLSLAQWQAVIDVNLTGVFLCTREVAAKMIEQKSQGAIINISSISRAGNIGQT NYSAAKAGVAAATVTWARELARYGIRVAGVAPGFIETEMTGSMRPEALEKMTSAIPLKRMGRPDEIAHSVAYILENDYFS GRILELDGAMRI
Sequences:
>Translated_252_residues MELKDKLIIITGGCQGLGRAMAEYLAGKGANLALLDLNQEKLDQAVAACEALGVKASAYLCNVANEEQVVDTVSKVAEDF GAIHGLVNNAGILRDGLLVKVKDGEMTKLSLAQWQAVIDVNLTGVFLCTREVAAKMIEQKSQGAIINISSISRAGNIGQT NYSAAKAGVAAATVTWARELARYGIRVAGVAPGFIETEMTGSMRPEALEKMTSAIPLKRMGRPDEIAHSVAYILENDYFS GRILELDGAMRI >Mature_252_residues MELKDKLIIITGGCQGLGRAMAEYLAGKGANLALLDLNQEKLDQAVAACEALGVKASAYLCNVANEEQVVDTVSKVAEDF GAIHGLVNNAGILRDGLLVKVKDGEMTKLSLAQWQAVIDVNLTGVFLCTREVAAKMIEQKSQGAIINISSISRAGNIGQT NYSAAKAGVAAATVTWARELARYGIRVAGVAPGFIETEMTGSMRPEALEKMTSAIPLKRMGRPDEIAHSVAYILENDYFS GRILELDGAMRI
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=249, Percent_Identity=39.3574297188755, Blast_Score=160, Evalue=7e-40, Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=35.5212355212355, Blast_Score=145, Evalue=4e-35, Organism=Homo sapiens, GI4758504, Length=258, Percent_Identity=35.6589147286822, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI83715985, Length=258, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=31.9066147859922, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=28.6852589641434, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI31542939, Length=263, Percent_Identity=30.4182509505703, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI109715829, Length=240, Percent_Identity=28.75, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI210032110, Length=199, Percent_Identity=27.6381909547739, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI4504505, Length=217, Percent_Identity=32.258064516129, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI5031737, Length=251, Percent_Identity=27.4900398406374, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI10190704, Length=255, Percent_Identity=30.1960784313725, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI142976729, Length=198, Percent_Identity=26.2626262626263, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI224922801, Length=178, Percent_Identity=33.1460674157303, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI4503301, Length=222, Percent_Identity=27.027027027027, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI126723750, Length=261, Percent_Identity=25.6704980842912, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI33667109, Length=203, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI59889578, Length=190, Percent_Identity=30.5263157894737, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI19743808, Length=221, Percent_Identity=26.6968325791855, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI4504503, Length=219, Percent_Identity=29.2237442922374, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI150247226, Length=206, Percent_Identity=28.1553398058252, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI40807363, Length=232, Percent_Identity=29.3103448275862, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI126723191, Length=187, Percent_Identity=27.807486631016, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI20149619, Length=205, Percent_Identity=27.8048780487805, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI209862901, Length=201, Percent_Identity=23.8805970149254, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI19923983, Length=201, Percent_Identity=23.8805970149254, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1787335, Length=253, Percent_Identity=36.7588932806324, Blast_Score=152, Evalue=3e-38, Organism=Escherichia coli, GI1790717, Length=257, Percent_Identity=34.2412451361868, Blast_Score=127, Evalue=7e-31, Organism=Escherichia coli, GI87082160, Length=257, Percent_Identity=34.2412451361868, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI2367175, Length=252, Percent_Identity=34.1269841269841, Blast_Score=117, Evalue=9e-28, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=32.4324324324324, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI1789208, Length=255, Percent_Identity=29.0196078431373, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1788459, Length=251, Percent_Identity=28.2868525896414, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787905, Length=252, Percent_Identity=29.7619047619048, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1789057, Length=230, Percent_Identity=30.8695652173913, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786812, Length=246, Percent_Identity=26.8292682926829, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787526, Length=225, Percent_Identity=25.7777777777778, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=27.4193548387097, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI2367365, Length=252, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25147288, Length=254, Percent_Identity=37.007874015748, Blast_Score=154, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17555706, Length=251, Percent_Identity=37.8486055776892, Blast_Score=153, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17538182, Length=251, Percent_Identity=34.6613545816733, Blast_Score=126, Evalue=8e-30, Organism=Caenorhabditis elegans, GI17560676, Length=256, Percent_Identity=28.90625, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI115534694, Length=254, Percent_Identity=29.9212598425197, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17536025, Length=260, Percent_Identity=30.3846153846154, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17536651, Length=260, Percent_Identity=30.3846153846154, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17565030, Length=269, Percent_Identity=30.1115241635688, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=28.6792452830189, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=29.8850574712644, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=28.0155642023346, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17559104, Length=268, Percent_Identity=28.7313432835821, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17562990, Length=265, Percent_Identity=29.811320754717, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=29.1666666666667, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17538486, Length=268, Percent_Identity=27.6119402985075, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI193203115, Length=201, Percent_Identity=29.8507462686567, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI193203117, Length=202, Percent_Identity=29.7029702970297, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=29.1666666666667, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=28.6245353159851, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=29.2490118577075, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=30.1115241635688, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=28.6259541984733, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17568967, Length=255, Percent_Identity=27.4509803921569, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17562910, Length=265, Percent_Identity=28.6792452830189, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=26.8199233716475, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17567345, Length=206, Percent_Identity=31.0679611650485, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=27.2030651340996, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17544670, Length=273, Percent_Identity=23.8095238095238, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71994604, Length=255, Percent_Identity=27.4509803921569, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17564282, Length=198, Percent_Identity=28.2828282828283, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17561272, Length=248, Percent_Identity=25.8064516129032, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17508895, Length=202, Percent_Identity=26.2376237623762, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=26.4367816091954, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=26.8199233716475, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=26.4150943396226, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17507613, Length=242, Percent_Identity=27.6859504132231, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32563809, Length=242, Percent_Identity=27.6859504132231, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=258, Percent_Identity=34.4961240310078, Blast_Score=103, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6324126, Length=261, Percent_Identity=31.8007662835249, Blast_Score=91, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6323882, Length=204, Percent_Identity=27.9411764705882, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI24639444, Length=255, Percent_Identity=35.2941176470588, Blast_Score=136, Evalue=1e-32, Organism=Drosophila melanogaster, GI17737361, Length=260, Percent_Identity=34.2307692307692, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI23397609, Length=257, Percent_Identity=31.5175097276265, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI21357041, Length=259, Percent_Identity=32.8185328185328, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI28571526, Length=261, Percent_Identity=32.5670498084291, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24644339, Length=258, Percent_Identity=31.3953488372093, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI21355319, Length=253, Percent_Identity=27.2727272727273, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI24649181, Length=194, Percent_Identity=32.9896907216495, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI18859837, Length=238, Percent_Identity=33.1932773109244, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24643142, Length=256, Percent_Identity=27.734375, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI24641232, Length=241, Percent_Identity=28.6307053941909, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24640492, Length=210, Percent_Identity=27.6190476190476, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI281364494, Length=246, Percent_Identity=28.8617886178862, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24648693, Length=243, Percent_Identity=25.9259259259259, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355889, Length=243, Percent_Identity=25.9259259259259, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24641388, Length=243, Percent_Identity=27.9835390946502, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI116007234, Length=245, Percent_Identity=27.7551020408163, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI116007236, Length=244, Percent_Identity=24.1803278688525, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24584752, Length=199, Percent_Identity=28.643216080402, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21356301, Length=202, Percent_Identity=28.2178217821782, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24663911, Length=239, Percent_Identity=23.8493723849372, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24644337, Length=264, Percent_Identity=28.4090909090909, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI281364892, Length=200, Percent_Identity=28, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI161076933, Length=222, Percent_Identity=29.2792792792793, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24584748, Length=222, Percent_Identity=29.2792792792793, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26829; Mature: 26829
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKDKLIIITGGCQGLGRAMAEYLAGKGANLALLDLNQEKLDQAVAACEALGVKASAYL CCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHEE CNVANEEQVVDTVSKVAEDFGAIHGLVNNAGILRDGLLVKVKDGEMTKLSLAQWQAVIDV ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCEEHHHHHEEEEEEE NLTGVFLCTREVAAKMIEQKSQGAIINISSISRAGNIGQTNYSAAKAGVAAATVTWAREL CCCEEEEEHHHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ARYGIRVAGVAPGFIETEMTGSMRPEALEKMTSAIPLKRMGRPDEIAHSVAYILENDYFS HHCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCCC GRILELDGAMRI CEEEEECCCCCC >Mature Secondary Structure MELKDKLIIITGGCQGLGRAMAEYLAGKGANLALLDLNQEKLDQAVAACEALGVKASAYL CCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHEE CNVANEEQVVDTVSKVAEDFGAIHGLVNNAGILRDGLLVKVKDGEMTKLSLAQWQAVIDV ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCEEHHHHHEEEEEEE NLTGVFLCTREVAAKMIEQKSQGAIINISSISRAGNIGQTNYSAAKAGVAAATVTWAREL CCCEEEEEHHHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ARYGIRVAGVAPGFIETEMTGSMRPEALEKMTSAIPLKRMGRPDEIAHSVAYILENDYFS HHCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCCC GRILELDGAMRI CEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]