| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is cutS [H]
Identifier: 66047296
GI number: 66047296
Start: 4852564
End: 4853853
Strand: Reverse
Name: cutS [H]
Synonym: Psyr_4069
Alternate gene names: 66047296
Gene position: 4853853-4852564 (Counterclockwise)
Preceding gene: 66047297
Following gene: 66047295
Centisome position: 79.65
GC content: 60.85
Gene sequence:
>1290_bases ATGGAGTTTAAACAGAGTCTTGCGCAACGGATCATCATTGCCTTCGCATTGATGAGTGCACTGGTCGCCGGGTCGTTCGC CATCGGGATCATCTCCACCGTCCACCTGGTCGAAGAAAAGCTGATTTCCGCCGGCCTCGGTGGTGACCTCAACCGTCTGA TGCTGATGGACAGCGTCAGCGACTGGAGCCACCGGCCCAAGCCCGACCAGTTGTTCTATTTCAGCAATGGTCCTGGCGAC TTCGACCTGCCCAAGGATATTCGTCACCTTGAGCCAGGCTTCCATGAGGTGTTCCGTGGGCCGTTGTCATACCACGCCAT GATCGAGGTGGTGGATGGCCGGCATTACGCCCTGTTGCAGGATCAGAGCGATTTTGAAGAGCGTGAGCGGGTGCTGTTCG CCGTCGTGCTGGTCGGTTTCGTTCTGGCCCTGGCGCTGGCGGTGTTTCTGGGTTGGGTGCTGGCGCGCCGGGTCATGGCA CCTGTGGTGCGTCTGGCCCGGCAGGTTCGCCACCGTGACCAGTTGCTCGGACTGGCACCGCCACTGGCGCCCGACTACGC CGCTGACGAAGTCGGCGAGTTGGCGGTGGCCTTCGATGCGACATTGGGCCGTTTGCGGCAGGCGCTGATTCGCGAGCGTA TGTTTACCAGTGACGTGAGCCATGAACTGCGTACGCCGTTGATGGTGCTGGCCAGCTCTTGTGAGCTGCTGCTGGAAAAC CCTGCGCTCGATTTGCGCGGCCGTCGACAGGTCGAGCGTATCGGCCGTGCCTGCGAAGAAATGCGCGATCTGGTGCAAAC CTTTCTGATGCTCGCTCGCACCCAGCGCGAGGACCCGGCCATGACGCCCAAGGCCACGCTGGTCGGGGTGGCCGAACAAT TGATCTCCCAGTGGCGTGACCCGATAGAGAGCAAGGGGCTGCAGTTGACCTACACGCCACCGGCCGATGACCAGCTGTCC GATATTCGTTACAACGCGACCTTCCTGCATGCCGTGATGGGCAACTTGCTGCGCAATGCCCTGCACTACACCGATCACGG ATTCATAGCGCTGACCCTGCACGCCGAAAGCTTCACCGTGGAAGACAGTGGCGTGGGTATTCCCGAGGAGAAGCGCGAGG CGATGTTCGAGCCTTTCGTACGCGGCAACGAGCAGCGCGGAGAAGGCCTGGGCCTCGGGCTGTCACTGGTGCAGCGCATT TGTACCAACCAGGGATGGAGCGTCGATCTCACCCCTATGGAACCTCATGGTTGCCGGTTCAAGGTAACGCTCAACGTGAT CAAACCCTGA
Upstream 100 bases:
>100_bases AGCCATGTGCACCAGTTGCGTCAGGTGATCGACAAACCGTTTGGCAAACCGCTGTTGCAGACCGTGCATGGCGTGGGCTA TCGCTTGGCCGAGGGCCGGG
Downstream 100 bases:
>100_bases CCTTTCTCCCGAGTAGACCGGCCTCATTGTGTAGCGGCCAATTGACTGCACTTCGTCGATTGGCCACACACGGCCTCTAA CTCTCTGTAAAATCTCGAAA
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MEFKQSLAQRIIIAFALMSALVAGSFAIGIISTVHLVEEKLISAGLGGDLNRLMLMDSVSDWSHRPKPDQLFYFSNGPGD FDLPKDIRHLEPGFHEVFRGPLSYHAMIEVVDGRHYALLQDQSDFEERERVLFAVVLVGFVLALALAVFLGWVLARRVMA PVVRLARQVRHRDQLLGLAPPLAPDYAADEVGELAVAFDATLGRLRQALIRERMFTSDVSHELRTPLMVLASSCELLLEN PALDLRGRRQVERIGRACEEMRDLVQTFLMLARTQREDPAMTPKATLVGVAEQLISQWRDPIESKGLQLTYTPPADDQLS DIRYNATFLHAVMGNLLRNALHYTDHGFIALTLHAESFTVEDSGVGIPEEKREAMFEPFVRGNEQRGEGLGLGLSLVQRI CTNQGWSVDLTPMEPHGCRFKVTLNVIKP
Sequences:
>Translated_429_residues MEFKQSLAQRIIIAFALMSALVAGSFAIGIISTVHLVEEKLISAGLGGDLNRLMLMDSVSDWSHRPKPDQLFYFSNGPGD FDLPKDIRHLEPGFHEVFRGPLSYHAMIEVVDGRHYALLQDQSDFEERERVLFAVVLVGFVLALALAVFLGWVLARRVMA PVVRLARQVRHRDQLLGLAPPLAPDYAADEVGELAVAFDATLGRLRQALIRERMFTSDVSHELRTPLMVLASSCELLLEN PALDLRGRRQVERIGRACEEMRDLVQTFLMLARTQREDPAMTPKATLVGVAEQLISQWRDPIESKGLQLTYTPPADDQLS DIRYNATFLHAVMGNLLRNALHYTDHGFIALTLHAESFTVEDSGVGIPEEKREAMFEPFVRGNEQRGEGLGLGLSLVQRI CTNQGWSVDLTPMEPHGCRFKVTLNVIKP >Mature_429_residues MEFKQSLAQRIIIAFALMSALVAGSFAIGIISTVHLVEEKLISAGLGGDLNRLMLMDSVSDWSHRPKPDQLFYFSNGPGD FDLPKDIRHLEPGFHEVFRGPLSYHAMIEVVDGRHYALLQDQSDFEERERVLFAVVLVGFVLALALAVFLGWVLARRVMA PVVRLARQVRHRDQLLGLAPPLAPDYAADEVGELAVAFDATLGRLRQALIRERMFTSDVSHELRTPLMVLASSCELLLEN PALDLRGRRQVERIGRACEEMRDLVQTFLMLARTQREDPAMTPKATLVGVAEQLISQWRDPIESKGLQLTYTPPADDQLS DIRYNATFLHAVMGNLLRNALHYTDHGFIALTLHAESFTVEDSGVGIPEEKREAMFEPFVRGNEQRGEGLGLGLSLVQRI CTNQGWSVDLTPMEPHGCRFKVTLNVIKP
Specific function: Member of the two-component regulatory system CutS/CutR, involved in the regulation of copper metabolism [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789808, Length=310, Percent_Identity=27.4193548387097, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1789403, Length=328, Percent_Identity=28.6585365853659, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1790551, Length=284, Percent_Identity=30.9859154929577, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1786783, Length=308, Percent_Identity=24.3506493506494, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1790346, Length=221, Percent_Identity=28.0542986425339, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI87081816, Length=266, Percent_Identity=28.9473684210526, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790861, Length=276, Percent_Identity=27.8985507246377, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790436, Length=226, Percent_Identity=25.6637168141593, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI87082128, Length=294, Percent_Identity=25.5102040816327, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI145693157, Length=226, Percent_Identity=26.5486725663717, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1787894, Length=237, Percent_Identity=26.5822784810127, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1786600, Length=240, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1786912, Length=221, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI48994928, Length=226, Percent_Identity=23.4513274336283, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788393, Length=261, Percent_Identity=27.9693486590038, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1789149, Length=356, Percent_Identity=22.752808988764, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 48000; Mature: 48000
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFKQSLAQRIIIAFALMSALVAGSFAIGIISTVHLVEEKLISAGLGGDLNRLMLMDSVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHH DWSHRPKPDQLFYFSNGPGDFDLPKDIRHLEPGFHEVFRGPLSYHAMIEVVDGRHYALLQ HCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCHHHHHCCCCHHHHHHEEECCCEEEEEC DQSDFEERERVLFAVVLVGFVLALALAVFLGWVLARRVMAPVVRLARQVRHRDQLLGLAP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLAPDYAADEVGELAVAFDATLGRLRQALIRERMFTSDVSHELRTPLMVLASSCELLLEN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PALDLRGRRQVERIGRACEEMRDLVQTFLMLARTQREDPAMTPKATLVGVAEQLISQWRD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC PIESKGLQLTYTPPADDQLSDIRYNATFLHAVMGNLLRNALHYTDHGFIALTLHAESFTV HHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEE EDSGVGIPEEKREAMFEPFVRGNEQRGEGLGLGLSLVQRICTNQGWSVDLTPMEPHGCRF CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCEE KVTLNVIKP EEEEEEECC >Mature Secondary Structure MEFKQSLAQRIIIAFALMSALVAGSFAIGIISTVHLVEEKLISAGLGGDLNRLMLMDSVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHH DWSHRPKPDQLFYFSNGPGDFDLPKDIRHLEPGFHEVFRGPLSYHAMIEVVDGRHYALLQ HCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCHHHHHCCCCHHHHHHEEECCCEEEEEC DQSDFEERERVLFAVVLVGFVLALALAVFLGWVLARRVMAPVVRLARQVRHRDQLLGLAP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLAPDYAADEVGELAVAFDATLGRLRQALIRERMFTSDVSHELRTPLMVLASSCELLLEN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PALDLRGRRQVERIGRACEEMRDLVQTFLMLARTQREDPAMTPKATLVGVAEQLISQWRD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC PIESKGLQLTYTPPADDQLSDIRYNATFLHAVMGNLLRNALHYTDHGFIALTLHAESFTV HHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEE EDSGVGIPEEKREAMFEPFVRGNEQRGEGLGLGLSLVQRICTNQGWSVDLTPMEPHGCRF CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCEE KVTLNVIKP EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]