| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66047288
Identifier: 66047288
GI number: 66047288
Start: 4844672
End: 4846048
Strand: Direct
Name: 66047288
Synonym: Psyr_4061
Alternate gene names: NA
Gene position: 4844672-4846048 (Clockwise)
Preceding gene: 66047287
Following gene: 66047290
Centisome position: 79.5
GC content: 63.4
Gene sequence:
>1377_bases ATGATTCGTATGCCTCTGGCAACCGCTAGTCTGTTGGCCATCGCTATCTCTCTCGCCGGTTGTGGCGAAGGCAAGGACAA GGCTGCCGCACCGGCTCCCGCGCCAGCCGCTGCTCCCGCGCCAGCCGCTGCTCCGGCGACGCCGGCTGCGACGCCTGCTG CTCCTGCTCCGGCAGCCGCCGCCCAGACTGACGACGCGGCGGCCAAGGCTGTGGTCGCGAACTACGCCAACATGGTGTCC GCCGTGTTCGACGATGCCGAGGCCGGCGCGAAAAAACTCAGCACGGCCGTCGACGCCTTCCTGGCCAAACCCAACGATGA AACCCTGAAAGCCGCCCGTGAGGCGTGGATCGCTGCGCGTGTGCCGTACATGCAGAGCGAAGTCTTCCGCTTCGGTAACA CCATCATCGATGACTGGGAAGGACAGGTTAACGCCTGGCCCCTGGACGAAGGCCTGATCGACTATGTGGCCAAGGATTAT CAACACGCACTGGGCAACCCGGGCGCCACTGCCAACATCATCGCCAACACCGAGATTCAGGTCGGCGAAGACAAGGTCGA CGTAAAGGAAATCACCTCCGAAAAACTCGCCAGTCTGAACGAGCTGGGCGGTTCCGAGGCCAACGTCGCCACCGGCTACC ACGCCATCGAATTCCTGCTCTGGGGCCAGGACCTGAACGGCACTGGCCCTGGCGCCGGCGCACGTCCGGCCAGCGATTAC CTGCAAGGGGCTGGCGCAACCGGCGGCCACAATGATCGCCGCCGTGCCTACCTCAAGGCCGTCACCGACCTGCTGGTCAG CGACCTTGAAGAAATGTCCGGTAACTGGAAGGCCGGCGTCCCCGACAACTACCGCGCCACGCTGGAAGCCGAATCCGGCG AAAGCGGTCTGCGCAAAATGCTCTTCGGCATGGGCAGCCTGTCGCTGGGTGAACTGGCGGGCGAGCGCATGAAAGTCGCA CTTGAAGCCAACTCCAGCGAAGACGAACACGACTGCTTCAGCGATAACACGCACAACTCGCACTTCTACAACGGCAAGGG CATTCGCAACGTTTACCTGGGCGAGTACACCCGCACCGACGGCAGCAAGGTCAGCGGCCCGAGCCTTTCGTCTCTGGTCG CCAAGGCAGACCCGGCCACCGACGCCACCTTGCGCGCTGACCTGGACGACACTCAGGCCAAGTTGCAGGTCATTGTCGAT CACGCGAACAAGGGCGAGCATTTCGACCAGTTGATCGCTGCCGGCAACACGGCTGGCAATCAGGTGGTGCGTGACGCCAT CGCCGCGCTGGTCAAACAGACCGGCGCTATCGAGCAGGCGGCTGGCAAGCTGGGCATCACTGACCTGAACCCGGACAACG CCGATCACGAGTTCTGA
Upstream 100 bases:
>100_bases CAGGCGTTTTGCCTTTACATCGAATGCAAATCTTTCGCATTATGTCGCAGATTTTATGGGCGCACCCCCGCCATCACCTT TATCGACGCAGGATTCCGTC
Downstream 100 bases:
>100_bases TCAACCGCGTTTGTTGCAGTAACCATCAATGCCGGTCAGTTCGCTGACCGGCATTTTTTGTGTCTGATTGACAGGCATCG TTTGCAACTGCCGTGCGCGT
Product: iron-regulated protein A, putative
Products: NA
Alternate protein names: Iron-Regulated Protein A; Insulin-Cleaving Metalloproteinase Outer Membrane Protein; Peptidase; Imelysin; Lipoprotein; Peptidase Imelysin Family; Insulin-Cleaving Metalloproteinase Outer Membrane; Iron-Regulated Lipoprotein; Imelysin Family; Exported Protein
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MIRMPLATASLLAIAISLAGCGEGKDKAAAPAPAPAAAPAPAAAPATPAATPAAPAPAAAAQTDDAAAKAVVANYANMVS AVFDDAEAGAKKLSTAVDAFLAKPNDETLKAAREAWIAARVPYMQSEVFRFGNTIIDDWEGQVNAWPLDEGLIDYVAKDY QHALGNPGATANIIANTEIQVGEDKVDVKEITSEKLASLNELGGSEANVATGYHAIEFLLWGQDLNGTGPGAGARPASDY LQGAGATGGHNDRRRAYLKAVTDLLVSDLEEMSGNWKAGVPDNYRATLEAESGESGLRKMLFGMGSLSLGELAGERMKVA LEANSSEDEHDCFSDNTHNSHFYNGKGIRNVYLGEYTRTDGSKVSGPSLSSLVAKADPATDATLRADLDDTQAKLQVIVD HANKGEHFDQLIAAGNTAGNQVVRDAIAALVKQTGAIEQAAGKLGITDLNPDNADHEF
Sequences:
>Translated_458_residues MIRMPLATASLLAIAISLAGCGEGKDKAAAPAPAPAAAPAPAAAPATPAATPAAPAPAAAAQTDDAAAKAVVANYANMVS AVFDDAEAGAKKLSTAVDAFLAKPNDETLKAAREAWIAARVPYMQSEVFRFGNTIIDDWEGQVNAWPLDEGLIDYVAKDY QHALGNPGATANIIANTEIQVGEDKVDVKEITSEKLASLNELGGSEANVATGYHAIEFLLWGQDLNGTGPGAGARPASDY LQGAGATGGHNDRRRAYLKAVTDLLVSDLEEMSGNWKAGVPDNYRATLEAESGESGLRKMLFGMGSLSLGELAGERMKVA LEANSSEDEHDCFSDNTHNSHFYNGKGIRNVYLGEYTRTDGSKVSGPSLSSLVAKADPATDATLRADLDDTQAKLQVIVD HANKGEHFDQLIAAGNTAGNQVVRDAIAALVKQTGAIEQAAGKLGITDLNPDNADHEF >Mature_458_residues MIRMPLATASLLAIAISLAGCGEGKDKAAAPAPAPAAAPAPAAAPATPAATPAAPAPAAAAQTDDAAAKAVVANYANMVS AVFDDAEAGAKKLSTAVDAFLAKPNDETLKAAREAWIAARVPYMQSEVFRFGNTIIDDWEGQVNAWPLDEGLIDYVAKDY QHALGNPGATANIIANTEIQVGEDKVDVKEITSEKLASLNELGGSEANVATGYHAIEFLLWGQDLNGTGPGAGARPASDY LQGAGATGGHNDRRRAYLKAVTDLLVSDLEEMSGNWKAGVPDNYRATLEAESGESGLRKMLFGMGSLSLGELAGERMKVA LEANSSEDEHDCFSDNTHNSHFYNGKGIRNVYLGEYTRTDGSKVSGPSLSSLVAKADPATDATLRADLDDTQAKLQVIVD HANKGEHFDQLIAAGNTAGNQVVRDAIAALVKQTGAIEQAAGKLGITDLNPDNADHEF
Specific function: Unknown
COG id: COG3487
COG function: function code P; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47668; Mature: 47668
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRMPLATASLLAIAISLAGCGEGKDKAAAPAPAPAAAPAPAAAPATPAATPAAPAPAAA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH AQTDDAAAKAVVANYANMVSAVFDDAEAGAKKLSTAVDAFLAKPNDETLKAAREAWIAAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC VPYMQSEVFRFGNTIIDDWEGQVNAWPLDEGLIDYVAKDYQHALGNPGATANIIANTEIQ CCHHHHHHHHHCCHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCEEE VGEDKVDVKEITSEKLASLNELGGSEANVATGYHAIEFLLWGQDLNGTGPGAGARPASDY ECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEECCCCCCCCCCCCCCCHHHH LQGAGATGGHNDRRRAYLKAVTDLLVSDLEEMSGNWKAGVPDNYRATLEAESGESGLRKM HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHH LFGMGSLSLGELAGERMKVALEANSSEDEHDCFSDNTHNSHFYNGKGIRNVYLGEYTRTD HHHCCCCCHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCEEECCCCCCEEEECCEECCC GSKVSGPSLSSLVAKADPATDATLRADLDDTQAKLQVIVDHANKGEHFDQLIAAGNTAGN CCCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHHHEEECCCCCHHHHHHHHCCCCCHH QVVRDAIAALVKQTGAIEQAAGKLGITDLNPDNADHEF HHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIRMPLATASLLAIAISLAGCGEGKDKAAAPAPAPAAAPAPAAAPATPAATPAAPAPAAA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH AQTDDAAAKAVVANYANMVSAVFDDAEAGAKKLSTAVDAFLAKPNDETLKAAREAWIAAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC VPYMQSEVFRFGNTIIDDWEGQVNAWPLDEGLIDYVAKDYQHALGNPGATANIIANTEIQ CCHHHHHHHHHCCHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCEEE VGEDKVDVKEITSEKLASLNELGGSEANVATGYHAIEFLLWGQDLNGTGPGAGARPASDY ECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEECCCCCCCCCCCCCCCHHHH LQGAGATGGHNDRRRAYLKAVTDLLVSDLEEMSGNWKAGVPDNYRATLEAESGESGLRKM HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHH LFGMGSLSLGELAGERMKVALEANSSEDEHDCFSDNTHNSHFYNGKGIRNVYLGEYTRTD HHHCCCCCHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCEEECCCCCCEEEECCEECCC GSKVSGPSLSSLVAKADPATDATLRADLDDTQAKLQVIVDHANKGEHFDQLIAAGNTAGN CCCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHHHEEECCCCCHHHHHHHHCCCCCHH QVVRDAIAALVKQTGAIEQAAGKLGITDLNPDNADHEF HHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA