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The map label for this gene is rhsB [C]

Identifier: 66047265

GI number: 66047265

Start: 4822412

End: 4825057

Strand: Direct

Name: rhsB [C]

Synonym: Psyr_4038

Alternate gene names: 66047265

Gene position: 4822412-4825057 (Clockwise)

Preceding gene: 66047264

Following gene: 66047266

Centisome position: 79.14

GC content: 54.46

Gene sequence:

>2646_bases
ATGAACACTACCTTGCACCAACACACACCTGATGTAAGAGCCGTTGACCCAAGAGGACTGGCAATCGGCAATATCGCTTA
TTGGCGAAGCGAGGCGCAGCAAGCGATGGAGCGCCGTATTACACGGAAGACTTACAACGCTGCGGGCCATGTGAGCACGC
AAAGAGATCCACGACTTGATGCGCCAAACCTGACAACAACTTACAGCCTTTCGGGGCAGCCGATACTGATCGACAGTGTG
GACGCCCACTGGCGACTGCTGCTATTGGGAGAAGCAGGTCAGACCATCAGCGGCTGGGACAGTAACGCCAATCAGCGTCA
TTTTGAGTACGATCCGTTGATGCGCCCTGTTTCGGTTACCGAGCAGCATCAGGTCGTTGAGCGTTTTGCCTATGGCGGAC
CTGATTCAGCCAGCCATAACTTATGCGGTCGGCTATCGCGCCATGACGACACCGCCGGTACAAGCCTGTCCCCGGACCAT
GGCCTGAGCGGCAAAGTACTTAATCAACATAGATATTTCTTACGAGTATCAGTAACGCCGGACTGGCCGCTGGCCGAAGC
CGAGCGCGATGCCTTGCTTGAGCCTGTCGTGCTGCAAACCTGCTGGCGGTTCAATGCGCTGGGCGACGCGCTTGCGCAGA
CCGATGCCATGGGCAATACCCAGGCATTTGGCATGACTGTCGCCGGACAGTTGAAAGCGGCTGGACTGACATTGGCCGGT
GCCTCACAGCCGCAGACACTGGTCAGTGCAATTGACTATGACGCATTCAACCAGGTCGAGCAGGAGACGGCAGGAAATGG
CGTGGTCAGTCGCTATGTGTATGATCTACAGGACGGTCGGCTGATTGAACTCAGTGCGCTATCTGCTGACGGCTCAGTGC
TGCAAAAACTGAATTACAGCTATGACCCGGCAGGTAACGTTCTACTCATCAACGATGCCTCGCAGCCAGACCGGTATTGC
GACAACCAGCTTATCGAACCGATCAGCCGTTACCGTTACGACACGTTGTACCAGTTGATCGAAGCCACGGGCCGGGAGGT
CAGAAACGGGGCCAGCCATGGTCCGGCGCTGCCCGGTCTGCAACCTGTCCCGACGCTCGATCCTTGCCAGGTCAGCAACT
ACAAACAGCATTACAGCTACGACGCTGCGGGTAACCTGCTGCAAATGCGCCACGAAGGCGCGCGCAACTTTACCCGCAAC
ATGCACGTTGCACCGGACAGCAATCGCAGCCTGCCCGACGATGACGGCGATGTGGATTTCGCCACGAGTTTTGATGCCAA
CGGCAATCTGCTGCAACTGGTGCGTGGGCAGGTTATGGGCTGGGATGTGCGTAACCAGTTGCAGCACATCACCACTGTGC
AACGTGAAGACGGGTCGAGCGATGACGAACGCTATGTCTATGACGGCCAAGGTCAGCGTTGTCGCAAGATCAGTACTGCT
CAGGCATCAGGTCGCATGCTGATCAACGAAGTGCGCTACCTGCCGGGGCTGGAAATTCGTACTACGGCCGATGGCGAAAT
CCTCCATGTCATCACCGCTCAGGCGGGTCGCAATAGTGTGCGAGTGTTGCACTGGAAAGCCGGAAAACCGGGCATTATTA
CGAACGATCAGGTGCGTTACAGCCTGGGTGATCATCTGGGCTCGAGCACGCTGGAACTGGATCAGCAAGGCGGCCTGATC
AGCCAGGAAAGCTATTACCCTTTCGGCGGCACGGCCTGGTGGGCGGCGCGCAGCGCAGTGGAAGCGAAGTACAAGACCGT
GCGTTATTCGGGCAAGGAGCGCGACGCCAGCGGGCTTTATTACTACGGGTTCAGGTATTACGCGCCGTGGTTGCAGCGGT
GGATCAGTCCGGATCCGGCGGGGGATGTGGATGGGTTGAATCTGTACGGGTACGTAAAAAACAGTCCAATCACCTATTAC
GACAGGTTGGGATACATGGGGAAGCACGCGCTTGAGTCGCCGCCATCACCCGCTCGTCGAAAACCGATAACCTCAAATAG
CTATGCCCTTGAAAATCAAGATGCGAGACCCGGTGTTTTGTGGGGCGATCAGGAGCCATTCCTCGGACCTGCTTACACAT
TACCAGACAGATATCTTGTTTCCGGATTGGAAGAAAGATTGGCCGCAGTTGATAAACGTTCCGGCGAGGCGACCGCTATC
GTAGCGACGATGTTTGACCATAACAGCAGCTTGGCATACGGCCCCTACGTCGTAGAATCAAAGCATCTTCAAAAAGAGGA
CGACTTCCTCAACGAATACGCGCCCAACGAATGGACCTTTCGTTCAAATTACAAAAGAAGCGGAAGCAATGACTACCATG
CCAATGACGTAGTCCGATACCAGTATAGAACCATCGCCCAAAAAACAAATACCCATGGCGTTTTACCTTCGGTTATAAAA
AATAGCTTCGTCGTGAATAATGAGACGTTGACGAAAACTTTGACAATAGAAAACAAAACTCCGGAAATGCTACAGACTTT
TCTTCAGGAAACGCCCAACGGCAAGCGAACTCAACGAGTACTTGACGACTTTGGCATGGAGGCTTTATGGGTTGATCGGC
AGGGGGACTCAGAATTCCCCTTCGCTGACTTTATTGTTGCTGTACGCCCTAAACAGCAATCATATAGCCAGACTGGCTTT
TACTAG

Upstream 100 bases:

>100_bases
CCTCGGCGAGGGATAGGTAACTTCCTGACTTTTTATAAATCCAGTTTTCCAGGGTGATCCTTGTTGCTGACGGTGAAATC
AACTCTCCCAGGAGAACATG

Downstream 100 bases:

>100_bases
GGAAACGATGGGGAAGACTTCCAAATTTGGTAGAACGTCTGATCTCAATCGCCGAGACGCCTGATGAAGCAGATGACCGA
CGCCGAAGACGCCGCATGGA

Product: YD repeat-containing protein

Products: NA

Alternate protein names: Insecticidal xin Complex; Rhs Family Protein; Insecticidal xin Protein; YD Repeat Protein; Insecticidal xin Complex Protein; C Component Of Insecticidal xin Complex; Rhs Family Protein-Like Protein; Insecticidal xin; Zinc Finger C2H2-Type Domain-Containing Protein; FG-GAP Repeat Protein; Rhs-Family Protein; Insecticidal xin SepC/Tcc Class; Insecticial xin; RHS Protein; YD Repeat-/RHS Repeat-Containing Protein; Integrins Alpha Chain; Insecticidal xin Complex-Like Protein; Insecticial xin Complex; Yd Repeat-Containing Protein; Complete Genome; Cytoplasmic Membrane Protein; RHS Repeat-Containing Protein; Rhs Core Protein With Extension; Insecticidal xin SepC/TccC; Peptidase; Insecticidal xin Complex Protein TcaC; Insecticidal xin Complex TccC; Truncated Rhs Family Protein; Insecticidal xin Complex Protein Tccc; RhsA Protein; Cell Wall-Associated Protein

Number of amino acids: Translated: 881; Mature: 881

Protein sequence:

>881_residues
MNTTLHQHTPDVRAVDPRGLAIGNIAYWRSEAQQAMERRITRKTYNAAGHVSTQRDPRLDAPNLTTTYSLSGQPILIDSV
DAHWRLLLLGEAGQTISGWDSNANQRHFEYDPLMRPVSVTEQHQVVERFAYGGPDSASHNLCGRLSRHDDTAGTSLSPDH
GLSGKVLNQHRYFLRVSVTPDWPLAEAERDALLEPVVLQTCWRFNALGDALAQTDAMGNTQAFGMTVAGQLKAAGLTLAG
ASQPQTLVSAIDYDAFNQVEQETAGNGVVSRYVYDLQDGRLIELSALSADGSVLQKLNYSYDPAGNVLLINDASQPDRYC
DNQLIEPISRYRYDTLYQLIEATGREVRNGASHGPALPGLQPVPTLDPCQVSNYKQHYSYDAAGNLLQMRHEGARNFTRN
MHVAPDSNRSLPDDDGDVDFATSFDANGNLLQLVRGQVMGWDVRNQLQHITTVQREDGSSDDERYVYDGQGQRCRKISTA
QASGRMLINEVRYLPGLEIRTTADGEILHVITAQAGRNSVRVLHWKAGKPGIITNDQVRYSLGDHLGSSTLELDQQGGLI
SQESYYPFGGTAWWAARSAVEAKYKTVRYSGKERDASGLYYYGFRYYAPWLQRWISPDPAGDVDGLNLYGYVKNSPITYY
DRLGYMGKHALESPPSPARRKPITSNSYALENQDARPGVLWGDQEPFLGPAYTLPDRYLVSGLEERLAAVDKRSGEATAI
VATMFDHNSSLAYGPYVVESKHLQKEDDFLNEYAPNEWTFRSNYKRSGSNDYHANDVVRYQYRTIAQKTNTHGVLPSVIK
NSFVVNNETLTKTLTIENKTPEMLQTFLQETPNGKRTQRVLDDFGMEALWVDRQGDSEFPFADFIVAVRPKQQSYSQTGF
Y

Sequences:

>Translated_881_residues
MNTTLHQHTPDVRAVDPRGLAIGNIAYWRSEAQQAMERRITRKTYNAAGHVSTQRDPRLDAPNLTTTYSLSGQPILIDSV
DAHWRLLLLGEAGQTISGWDSNANQRHFEYDPLMRPVSVTEQHQVVERFAYGGPDSASHNLCGRLSRHDDTAGTSLSPDH
GLSGKVLNQHRYFLRVSVTPDWPLAEAERDALLEPVVLQTCWRFNALGDALAQTDAMGNTQAFGMTVAGQLKAAGLTLAG
ASQPQTLVSAIDYDAFNQVEQETAGNGVVSRYVYDLQDGRLIELSALSADGSVLQKLNYSYDPAGNVLLINDASQPDRYC
DNQLIEPISRYRYDTLYQLIEATGREVRNGASHGPALPGLQPVPTLDPCQVSNYKQHYSYDAAGNLLQMRHEGARNFTRN
MHVAPDSNRSLPDDDGDVDFATSFDANGNLLQLVRGQVMGWDVRNQLQHITTVQREDGSSDDERYVYDGQGQRCRKISTA
QASGRMLINEVRYLPGLEIRTTADGEILHVITAQAGRNSVRVLHWKAGKPGIITNDQVRYSLGDHLGSSTLELDQQGGLI
SQESYYPFGGTAWWAARSAVEAKYKTVRYSGKERDASGLYYYGFRYYAPWLQRWISPDPAGDVDGLNLYGYVKNSPITYY
DRLGYMGKHALESPPSPARRKPITSNSYALENQDARPGVLWGDQEPFLGPAYTLPDRYLVSGLEERLAAVDKRSGEATAI
VATMFDHNSSLAYGPYVVESKHLQKEDDFLNEYAPNEWTFRSNYKRSGSNDYHANDVVRYQYRTIAQKTNTHGVLPSVIK
NSFVVNNETLTKTLTIENKTPEMLQTFLQETPNGKRTQRVLDDFGMEALWVDRQGDSEFPFADFIVAVRPKQQSYSQTGF
Y
>Mature_881_residues
MNTTLHQHTPDVRAVDPRGLAIGNIAYWRSEAQQAMERRITRKTYNAAGHVSTQRDPRLDAPNLTTTYSLSGQPILIDSV
DAHWRLLLLGEAGQTISGWDSNANQRHFEYDPLMRPVSVTEQHQVVERFAYGGPDSASHNLCGRLSRHDDTAGTSLSPDH
GLSGKVLNQHRYFLRVSVTPDWPLAEAERDALLEPVVLQTCWRFNALGDALAQTDAMGNTQAFGMTVAGQLKAAGLTLAG
ASQPQTLVSAIDYDAFNQVEQETAGNGVVSRYVYDLQDGRLIELSALSADGSVLQKLNYSYDPAGNVLLINDASQPDRYC
DNQLIEPISRYRYDTLYQLIEATGREVRNGASHGPALPGLQPVPTLDPCQVSNYKQHYSYDAAGNLLQMRHEGARNFTRN
MHVAPDSNRSLPDDDGDVDFATSFDANGNLLQLVRGQVMGWDVRNQLQHITTVQREDGSSDDERYVYDGQGQRCRKISTA
QASGRMLINEVRYLPGLEIRTTADGEILHVITAQAGRNSVRVLHWKAGKPGIITNDQVRYSLGDHLGSSTLELDQQGGLI
SQESYYPFGGTAWWAARSAVEAKYKTVRYSGKERDASGLYYYGFRYYAPWLQRWISPDPAGDVDGLNLYGYVKNSPITYY
DRLGYMGKHALESPPSPARRKPITSNSYALENQDARPGVLWGDQEPFLGPAYTLPDRYLVSGLEERLAAVDKRSGEATAI
VATMFDHNSSLAYGPYVVESKHLQKEDDFLNEYAPNEWTFRSNYKRSGSNDYHANDVVRYQYRTIAQKTNTHGVLPSVIK
NSFVVNNETLTKTLTIENKTPEMLQTFLQETPNGKRTQRVLDDFGMEALWVDRQGDSEFPFADFIVAVRPKQQSYSQTGF
Y

Specific function: Rhs Elements Have A Nonessential Function. They May Play An Important Role In The Natural Ecology Of The Cell. [C]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 98455; Mature: 98455

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTLHQHTPDVRAVDPRGLAIGNIAYWRSEAQQAMERRITRKTYNAAGHVSTQRDPRLD
CCCCCCCCCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
APNLTTTYSLSGQPILIDSVDAHWRLLLLGEAGQTISGWDSNANQRHFEYDPLMRPVSVT
CCCCEEEEECCCCEEEEECCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCHH
EQHQVVERFAYGGPDSASHNLCGRLSRHDDTAGTSLSPDHGLSGKVLNQHRYFLRVSVTP
HHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEECC
DWPLAEAERDALLEPVVLQTCWRFNALGDALAQTDAMGNTQAFGMTVAGQLKAAGLTLAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECEEEECCCEECCEEEEC
ASQPQTLVSAIDYDAFNQVEQETAGNGVVSRYVYDLQDGRLIELSALSADGSVLQKLNYS
CCCCHHHHHHHCHHHHHHHHHHHCCCCEEEHHEEECCCCCEEEEEEECCCHHHHHHCCCC
YDPAGNVLLINDASQPDRYCDNQLIEPISRYRYDTLYQLIEATGREVRNGASHGPALPGL
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QPVPTLDPCQVSNYKQHYSYDAAGNLLQMRHEGARNFTRNMHVAPDSNRSLPDDDGDVDF
CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEE
ATSFDANGNLLQLVRGQVMGWDVRNQLQHITTVQREDGSSDDERYVYDGQGQRCRKISTA
EEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHH
QASGRMLINEVRYLPGLEIRTTADGEILHVITAQAGRNSVRVLHWKAGKPGIITNDQVRY
HHCCHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEE
SLGDHLGSSTLELDQQGGLISQESYYPFGGTAWWAARSAVEAKYKTVRYSGKERDASGLY
HHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEE
YYGFRYYAPWLQRWISPDPAGDVDGLNLYGYVKNSPITYYDRLGYMGKHALESPPSPARR
EEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEHHHHHCHHHHHHHCCCCCCHHC
KPITSNSYALENQDARPGVLWGDQEPFLGPAYTLPDRYLVSGLEERLAAVDKRSGEATAI
CCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
VATMFDHNSSLAYGPYVVESKHLQKEDDFLNEYAPNEWTFRSNYKRSGSNDYHANDVVRY
EEEEECCCCCCEECCEEECCHHCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCEEHH
QYRTIAQKTNTHGVLPSVIKNSFVVNNETLTKTLTIENKTPEMLQTFLQETPNGKRTQRV
HHHHHHHHCCCCCCCHHHHCCCEEECCCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHH
LDDFGMEALWVDRQGDSEFPFADFIVAVRPKQQSYSQTGFY
HHHCCCEEEEEECCCCCCCCHHHEEEEECCCHHCCCCCCCC
>Mature Secondary Structure
MNTTLHQHTPDVRAVDPRGLAIGNIAYWRSEAQQAMERRITRKTYNAAGHVSTQRDPRLD
CCCCCCCCCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
APNLTTTYSLSGQPILIDSVDAHWRLLLLGEAGQTISGWDSNANQRHFEYDPLMRPVSVT
CCCCEEEEECCCCEEEEECCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCHH
EQHQVVERFAYGGPDSASHNLCGRLSRHDDTAGTSLSPDHGLSGKVLNQHRYFLRVSVTP
HHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEECC
DWPLAEAERDALLEPVVLQTCWRFNALGDALAQTDAMGNTQAFGMTVAGQLKAAGLTLAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECEEEECCCEECCEEEEC
ASQPQTLVSAIDYDAFNQVEQETAGNGVVSRYVYDLQDGRLIELSALSADGSVLQKLNYS
CCCCHHHHHHHCHHHHHHHHHHHCCCCEEEHHEEECCCCCEEEEEEECCCHHHHHHCCCC
YDPAGNVLLINDASQPDRYCDNQLIEPISRYRYDTLYQLIEATGREVRNGASHGPALPGL
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QPVPTLDPCQVSNYKQHYSYDAAGNLLQMRHEGARNFTRNMHVAPDSNRSLPDDDGDVDF
CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEE
ATSFDANGNLLQLVRGQVMGWDVRNQLQHITTVQREDGSSDDERYVYDGQGQRCRKISTA
EEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHH
QASGRMLINEVRYLPGLEIRTTADGEILHVITAQAGRNSVRVLHWKAGKPGIITNDQVRY
HHCCHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEE
SLGDHLGSSTLELDQQGGLISQESYYPFGGTAWWAARSAVEAKYKTVRYSGKERDASGLY
HHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEE
YYGFRYYAPWLQRWISPDPAGDVDGLNLYGYVKNSPITYYDRLGYMGKHALESPPSPARR
EEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEHHHHHCHHHHHHHCCCCCCHHC
KPITSNSYALENQDARPGVLWGDQEPFLGPAYTLPDRYLVSGLEERLAAVDKRSGEATAI
CCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
VATMFDHNSSLAYGPYVVESKHLQKEDDFLNEYAPNEWTFRSNYKRSGSNDYHANDVVRY
EEEEECCCCCCEECCEEECCHHCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCEEHH
QYRTIAQKTNTHGVLPSVIKNSFVVNNETLTKTLTIENKTPEMLQTFLQETPNGKRTQRV
HHHHHHHHCCCCCCCHHHHCCCEEECCCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHH
LDDFGMEALWVDRQGDSEFPFADFIVAVRPKQQSYSQTGFY
HHHCCCEEEEEECCCCCCCCHHHEEEEECCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA