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The map label for this gene is 66047260

Identifier: 66047260

GI number: 66047260

Start: 4804230

End: 4807049

Strand: Reverse

Name: 66047260

Synonym: Psyr_4033

Alternate gene names: NA

Gene position: 4807049-4804230 (Counterclockwise)

Preceding gene: 66047271

Following gene: 66047259

Centisome position: 78.89

GC content: 54.75

Gene sequence:

>2820_bases
ATGAACTCGATCATGCACACCAATACGCCGCAATTGGCGGTCAGCGATTCACGGGCCCTGCCGGTACGCAGTGTGCAGTT
CTATCGTGGCGCTGATGATCAGCCTGTTGAAGCCAGGGTGACGCAGCAATATTTCGACAAGGCCGGGCGACTGATCGCCA
GTCGCGATCCACGTTTTGCCAGTCGTTTGAAATACGGTGTCTGTGCGCCTGTGAACCTGATGCAAATCGTCAGTTTGTCC
GGGGCTTTGCTGCTATCGAAAAGTGTCGACTCAGGTTGGCGGGTGAGCCTCAATGGCGAAGCGGGGCAGTTAGTCGACGG
CTGGGACGGACGTGACAACCCGCGCCAGATCGAATACGACGCGCAATTGCGCCCTTTGGCGATCAACGAATCAGGCCGAA
TGACCGAGCGCTTCACTTATGGCGGGCCCGCCACTGCTGAGCGTAACCAGTGCAATCAACTGATTCGCCATGACGATACG
GCAGGCTCGCGCCTGCTGCAGGACTATGGACTGTCGGGCGGGGTTCTGAGTGAGGAACGGTGTTTCCTGCAGTCGCCTGA
CCGCCCGGACTGGCCACTTGCCGAACCTGATCGTGATGCACTGCTGGAGCCCGTCGGCCTGCAGACACGCCGGGCTTTCA
ACGCGCAGGGCGAAGCGCTGGCGCAGACTGACGCCAACGGTAACGTCCAGCGTTTCAGTTACGGTGCGGCGGGGCAACTG
CACGCTGTTGAACTGACCCTGACCAATACGGAACAGCCGCAAACGCTGGTCAGTGCAATTGACTATGACGCATTCAACCA
GGTCGAGCAGGAGACGGCAGGAAATGGCGTGGTCAGCCGCTATGTGTATGATCTACAGGACGGTCGGCTGATTGAACTCA
GTGCGCTATCTGCTGACGGCTCAGTGCTGCAAAAACTGAATTACAGCTATGACCCGGCAGGTAACGTTCTACTCATCAAC
GATGCCTCGCAGCCAGACCGGTATTGCGGCAATCAGCGTATCGAGCCGATAAACCGCTACTGTTACGACACGTTGTATCA
GTTGATCGAAGCCACGGGTCGTGAGGTCAGAAACGGTGCCAGTCATGGTCCGGCGCTGCCCGGTCTGCAACCTGTCCCGA
CGCTCGATCCTTGCCAGGTCAGCAACTACAGACAGCATTACAGCTACGACCCTGCGGGTAACCTGCTGCAAATGCGCCAC
GAAGGCGCACACAACTTCACCCGCAACATGCACGTTGCACCGGACAGCAATCGCAGCCTGCCCGACGATGACGAGGATGT
GGATTTCGCCACGAGTTTTGATGCCAACGGCAACCTGCTGCAACTGGTGCGTGGTCAGGTTATGGGTTGGGATGTGCGTA
ACCAGTTGCAGCACATCACCACTGTGCAACGTGAAGACGGGGCGAACGATGACGAACGCTATGTCTATGACGGCCAGGGT
CAGCGTTGCCGCAAGATCAGCACCGCGCAGGCATCAGGTCGCACGCTGAGCAACGAAGTGCGCTACCTGCCGGGGCTGGA
AATCCGGACCACGGCGAGTGGGGAAATTCTCCACGTCGTTATCGCTCAGGCGGATCGCAACAACGTGCGGGTGCTGCACT
GGGAAGCGGGAAAACCAGATGCCATTGCGAACGACCAGGTGCGCTACAGCCTGGGTGATCATTTGGGCTCAAGCACGCTG
GAGCTTGATCAGCAAGGCGGCCTGATCAGCCAGGAAAGTTATTATCCGTTCGGCGGTACGGCCTGGTGGGCGGCGCGCAG
TGCAGTGGACGCCAAGTACAAAACAGTTCGGTACTCGGGTAAAGAGCGCGATGCCAGTGGGCTTTATTACTACGGGTTCA
GGTATTACGCGCCGTGGTTGCAGCGGTGGATCAATCCTGACCCGGCGGGGGCTGTAGATGGGTTGAATCTTTATGCAATG
GTTGGGAATAGTCCGTTACGAAATAAAGATATAGCGGGTTTGCAACATCGACCTTATCAGGGCTTTCAAGACGCTTACGA
GCAGCAGGCCAGTTCAAGTGGCCTCACCCTCATCGCTCGAGGCAGAGAAAATATAAAACTGTTGAAGAAGCCTCCGACAG
ATAAGCTGGGTCATGCCCTTGAGGTTGTTGAAGTGGCCTATAAGGAGAGTCAGCGTGTTTTTAATAGCGGAGATTTAACT
GAAACGCAAAAAGTCGTCGTCTGGAATGTCATGGGGTATACATCACTGGCACAAATGCCCGAAATGGCCAGTCAGTACGC
GAGTTTGAACGACGTGGTGCAGGATTATACGGCAGGGCACGGGTTTAATCAGTTTGCCGTCTTTGGCAGGCAGCCAGGTA
CTCAGGGTCTTACCTTTTCAAACGACCCACACAAAAGAATATTTTTAGGGCGGGAGGTATTGGATTTTCATGTGCTGGGA
ACCGCGCTGGTAATGGGCCATGAAATTTCCCATACCACGCAGAGGCGTTCGAAGGATTACATTTATATGAATGCGAACGT
CAATCGGGATGAAGGTGTTGAGCAGTTAACACCAGGTGACGTGGATGAGCATTTGCAGAGCATGTTAGAGTCGGCAAGTC
ATGTCACAGCAGGGCAGCATGACCACGTCATATTTTCGAATATTGATAGCATGATTCGCGAAGGTAAACTGACGGCAGAT
GATGTAACAAGTCTGTTTGCAACCCGTAGTCTTCAAGATATCCACGTTAACCGCTTAACGTACCCGGGTGTCAGGGACCG
CATCCTGCGTAATAATGCAGATAATATTGCATTTTTAGGGCTTTTTCTCGGAAGAGAGCAGGTTGTTTCAAAAATGAAGG
CGCGAGGCTATGTTAAGTAG

Upstream 100 bases:

>100_bases
CCAAAGTTTATGCCTATTGGTTCTTGACCAAGCCGCGTGCTTCCGTTTGTCTGCTGTTATGGTTGAAGGGCGTCACTAAC
GGCGGATAGAGGTTTCAAGG

Downstream 100 bases:

>100_bases
ATGCAGGATGCTGTGGTCGCGCGAGGGCGTCCGGTCTGTATTTGAAGTATGAGCTTGATTTTTCGTGCTGCACGTCCGTG
CACTGATCCTGTCAGGCAGG

Product: YD repeat-containing protein

Products: NA

Alternate protein names: YD Repeat Protein; Insecticidal xin Complex; Insecticidal xin Protein; Rhs Family Protein; Insecticidal xin Complex Protein; C Component Of Insecticidal xin Complex; Rhs Family Protein-Like Protein; Insecticidal xin; Zinc Finger C2H2-Type Domain-Containing Protein; FG-GAP Repeat Protein; Insecticidal xin SepC/Tcc Class; Insecticial xin; YD Repeat-/RHS Repeat-Containing Protein; Integrins Alpha Chain; Insecticidal xin Complex-Like Protein; Insecticial xin Complex; Rhs Core Protein With Extension; Insecticidal xin SepC/TccC; Insecticidal xin Complex Protein TcaC; Insecticidal xin Complex TccC; Truncated Rhs Family Protein; Insecticidal xin Complex Protein Tccc

Number of amino acids: Translated: 939; Mature: 939

Protein sequence:

>939_residues
MNSIMHTNTPQLAVSDSRALPVRSVQFYRGADDQPVEARVTQQYFDKAGRLIASRDPRFASRLKYGVCAPVNLMQIVSLS
GALLLSKSVDSGWRVSLNGEAGQLVDGWDGRDNPRQIEYDAQLRPLAINESGRMTERFTYGGPATAERNQCNQLIRHDDT
AGSRLLQDYGLSGGVLSEERCFLQSPDRPDWPLAEPDRDALLEPVGLQTRRAFNAQGEALAQTDANGNVQRFSYGAAGQL
HAVELTLTNTEQPQTLVSAIDYDAFNQVEQETAGNGVVSRYVYDLQDGRLIELSALSADGSVLQKLNYSYDPAGNVLLIN
DASQPDRYCGNQRIEPINRYCYDTLYQLIEATGREVRNGASHGPALPGLQPVPTLDPCQVSNYRQHYSYDPAGNLLQMRH
EGAHNFTRNMHVAPDSNRSLPDDDEDVDFATSFDANGNLLQLVRGQVMGWDVRNQLQHITTVQREDGANDDERYVYDGQG
QRCRKISTAQASGRTLSNEVRYLPGLEIRTTASGEILHVVIAQADRNNVRVLHWEAGKPDAIANDQVRYSLGDHLGSSTL
ELDQQGGLISQESYYPFGGTAWWAARSAVDAKYKTVRYSGKERDASGLYYYGFRYYAPWLQRWINPDPAGAVDGLNLYAM
VGNSPLRNKDIAGLQHRPYQGFQDAYEQQASSSGLTLIARGRENIKLLKKPPTDKLGHALEVVEVAYKESQRVFNSGDLT
ETQKVVVWNVMGYTSLAQMPEMASQYASLNDVVQDYTAGHGFNQFAVFGRQPGTQGLTFSNDPHKRIFLGREVLDFHVLG
TALVMGHEISHTTQRRSKDYIYMNANVNRDEGVEQLTPGDVDEHLQSMLESASHVTAGQHDHVIFSNIDSMIREGKLTAD
DVTSLFATRSLQDIHVNRLTYPGVRDRILRNNADNIAFLGLFLGREQVVSKMKARGYVK

Sequences:

>Translated_939_residues
MNSIMHTNTPQLAVSDSRALPVRSVQFYRGADDQPVEARVTQQYFDKAGRLIASRDPRFASRLKYGVCAPVNLMQIVSLS
GALLLSKSVDSGWRVSLNGEAGQLVDGWDGRDNPRQIEYDAQLRPLAINESGRMTERFTYGGPATAERNQCNQLIRHDDT
AGSRLLQDYGLSGGVLSEERCFLQSPDRPDWPLAEPDRDALLEPVGLQTRRAFNAQGEALAQTDANGNVQRFSYGAAGQL
HAVELTLTNTEQPQTLVSAIDYDAFNQVEQETAGNGVVSRYVYDLQDGRLIELSALSADGSVLQKLNYSYDPAGNVLLIN
DASQPDRYCGNQRIEPINRYCYDTLYQLIEATGREVRNGASHGPALPGLQPVPTLDPCQVSNYRQHYSYDPAGNLLQMRH
EGAHNFTRNMHVAPDSNRSLPDDDEDVDFATSFDANGNLLQLVRGQVMGWDVRNQLQHITTVQREDGANDDERYVYDGQG
QRCRKISTAQASGRTLSNEVRYLPGLEIRTTASGEILHVVIAQADRNNVRVLHWEAGKPDAIANDQVRYSLGDHLGSSTL
ELDQQGGLISQESYYPFGGTAWWAARSAVDAKYKTVRYSGKERDASGLYYYGFRYYAPWLQRWINPDPAGAVDGLNLYAM
VGNSPLRNKDIAGLQHRPYQGFQDAYEQQASSSGLTLIARGRENIKLLKKPPTDKLGHALEVVEVAYKESQRVFNSGDLT
ETQKVVVWNVMGYTSLAQMPEMASQYASLNDVVQDYTAGHGFNQFAVFGRQPGTQGLTFSNDPHKRIFLGREVLDFHVLG
TALVMGHEISHTTQRRSKDYIYMNANVNRDEGVEQLTPGDVDEHLQSMLESASHVTAGQHDHVIFSNIDSMIREGKLTAD
DVTSLFATRSLQDIHVNRLTYPGVRDRILRNNADNIAFLGLFLGREQVVSKMKARGYVK
>Mature_939_residues
MNSIMHTNTPQLAVSDSRALPVRSVQFYRGADDQPVEARVTQQYFDKAGRLIASRDPRFASRLKYGVCAPVNLMQIVSLS
GALLLSKSVDSGWRVSLNGEAGQLVDGWDGRDNPRQIEYDAQLRPLAINESGRMTERFTYGGPATAERNQCNQLIRHDDT
AGSRLLQDYGLSGGVLSEERCFLQSPDRPDWPLAEPDRDALLEPVGLQTRRAFNAQGEALAQTDANGNVQRFSYGAAGQL
HAVELTLTNTEQPQTLVSAIDYDAFNQVEQETAGNGVVSRYVYDLQDGRLIELSALSADGSVLQKLNYSYDPAGNVLLIN
DASQPDRYCGNQRIEPINRYCYDTLYQLIEATGREVRNGASHGPALPGLQPVPTLDPCQVSNYRQHYSYDPAGNLLQMRH
EGAHNFTRNMHVAPDSNRSLPDDDEDVDFATSFDANGNLLQLVRGQVMGWDVRNQLQHITTVQREDGANDDERYVYDGQG
QRCRKISTAQASGRTLSNEVRYLPGLEIRTTASGEILHVVIAQADRNNVRVLHWEAGKPDAIANDQVRYSLGDHLGSSTL
ELDQQGGLISQESYYPFGGTAWWAARSAVDAKYKTVRYSGKERDASGLYYYGFRYYAPWLQRWINPDPAGAVDGLNLYAM
VGNSPLRNKDIAGLQHRPYQGFQDAYEQQASSSGLTLIARGRENIKLLKKPPTDKLGHALEVVEVAYKESQRVFNSGDLT
ETQKVVVWNVMGYTSLAQMPEMASQYASLNDVVQDYTAGHGFNQFAVFGRQPGTQGLTFSNDPHKRIFLGREVLDFHVLG
TALVMGHEISHTTQRRSKDYIYMNANVNRDEGVEQLTPGDVDEHLQSMLESASHVTAGQHDHVIFSNIDSMIREGKLTAD
DVTSLFATRSLQDIHVNRLTYPGVRDRILRNNADNIAFLGLFLGREQVVSKMKARGYVK

Specific function: Unknown

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104533; Mature: 104533

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIMHTNTPQLAVSDSRALPVRSVQFYRGADDQPVEARVTQQYFDKAGRLIASRDPRFA
CCCCCCCCCCCEEECCCCCCCCCEEHEECCCCCCCHHHHHHHHHHHHHCCEEECCCCHHH
SRLKYGVCAPVNLMQIVSLSGALLLSKSVDSGWRVSLNGEAGQLVDGWDGRDNPRQIEYD
HHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCEECCCCCCCCCCEEEEC
AQLRPLAINESGRMTERFTYGGPATAERNQCNQLIRHDDTAGSRLLQDYGLSGGVLSEER
CCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC
CFLQSPDRPDWPLAEPDRDALLEPVGLQTRRAFNAQGEALAQTDANGNVQRFSYGAAGQL
HHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCEEEECCCCCCEEEEECCCCCCE
HAVELTLTNTEQPQTLVSAIDYDAFNQVEQETAGNGVVSRYVYDLQDGRLIELSALSADG
EEEEEEECCCCCHHHHHHHHCHHHHHHHHHHHCCCCCHHHHEEECCCCCEEEEEEECCCH
SVLQKLNYSYDPAGNVLLINDASQPDRYCGNQRIEPINRYCYDTLYQLIEATGREVRNGA
HHHHHCCCCCCCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SHGPALPGLQPVPTLDPCQVSNYRQHYSYDPAGNLLQMRHEGAHNFTRNMHVAPDSNRSL
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCHHHCCEEECCCCCCCC
PDDDEDVDFATSFDANGNLLQLVRGQVMGWDVRNQLQHITTVQREDGANDDERYVYDGQG
CCCCCCCCEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCC
QRCRKISTAQASGRTLSNEVRYLPGLEIRTTASGEILHVVIAQADRNNVRVLHWEAGKPD
CHHHHHHHHHCCCCCHHCCHHHCCCCEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCC
AIANDQVRYSLGDHLGSSTLELDQQGGLISQESYYPFGGTAWWAARSAVDAKYKTVRYSG
CCCCCCEEEHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECC
KERDASGLYYYGFRYYAPWLQRWINPDPAGAVDGLNLYAMVGNSPLRNKDIAGLQHRPYQ
CCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
GFQDAYEQQASSSGLTLIARGRENIKLLKKPPTDKLGHALEVVEVAYKESQRVFNSGDLT
CHHHHHHHHCCCCCCEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
ETQKVVVWNVMGYTSLAQMPEMASQYASLNDVVQDYTAGHGFNQFAVFGRQPGTQGLTFS
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
NDPHKRIFLGREVLDFHVLGTALVMGHEISHTTQRRSKDYIYMNANVNRDEGVEQLTPGD
CCCCCEEEECHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCHHCCHHHCCCCC
VDEHLQSMLESASHVTAGQHDHVIFSNIDSMIREGKLTADDVTSLFATRSLQDIHVNRLT
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHEECCCC
YPGVRDRILRNNADNIAFLGLFLGREQVVSKMKARGYVK
CCCHHHHHHHCCCCCEEEEHHHHCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSIMHTNTPQLAVSDSRALPVRSVQFYRGADDQPVEARVTQQYFDKAGRLIASRDPRFA
CCCCCCCCCCCEEECCCCCCCCCEEHEECCCCCCCHHHHHHHHHHHHHCCEEECCCCHHH
SRLKYGVCAPVNLMQIVSLSGALLLSKSVDSGWRVSLNGEAGQLVDGWDGRDNPRQIEYD
HHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCEECCCCCCCCCCEEEEC
AQLRPLAINESGRMTERFTYGGPATAERNQCNQLIRHDDTAGSRLLQDYGLSGGVLSEER
CCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC
CFLQSPDRPDWPLAEPDRDALLEPVGLQTRRAFNAQGEALAQTDANGNVQRFSYGAAGQL
HHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCEEEECCCCCCEEEEECCCCCCE
HAVELTLTNTEQPQTLVSAIDYDAFNQVEQETAGNGVVSRYVYDLQDGRLIELSALSADG
EEEEEEECCCCCHHHHHHHHCHHHHHHHHHHHCCCCCHHHHEEECCCCCEEEEEEECCCH
SVLQKLNYSYDPAGNVLLINDASQPDRYCGNQRIEPINRYCYDTLYQLIEATGREVRNGA
HHHHHCCCCCCCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SHGPALPGLQPVPTLDPCQVSNYRQHYSYDPAGNLLQMRHEGAHNFTRNMHVAPDSNRSL
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCHHHCCEEECCCCCCCC
PDDDEDVDFATSFDANGNLLQLVRGQVMGWDVRNQLQHITTVQREDGANDDERYVYDGQG
CCCCCCCCEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCC
QRCRKISTAQASGRTLSNEVRYLPGLEIRTTASGEILHVVIAQADRNNVRVLHWEAGKPD
CHHHHHHHHHCCCCCHHCCHHHCCCCEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCC
AIANDQVRYSLGDHLGSSTLELDQQGGLISQESYYPFGGTAWWAARSAVDAKYKTVRYSG
CCCCCCEEEHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECC
KERDASGLYYYGFRYYAPWLQRWINPDPAGAVDGLNLYAMVGNSPLRNKDIAGLQHRPYQ
CCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
GFQDAYEQQASSSGLTLIARGRENIKLLKKPPTDKLGHALEVVEVAYKESQRVFNSGDLT
CHHHHHHHHCCCCCCEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
ETQKVVVWNVMGYTSLAQMPEMASQYASLNDVVQDYTAGHGFNQFAVFGRQPGTQGLTFS
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
NDPHKRIFLGREVLDFHVLGTALVMGHEISHTTQRRSKDYIYMNANVNRDEGVEQLTPGD
CCCCCEEEECHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCHHCCHHHCCCCC
VDEHLQSMLESASHVTAGQHDHVIFSNIDSMIREGKLTADDVTSLFATRSLQDIHVNRLT
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHEECCCC
YPGVRDRILRNNADNIAFLGLFLGREQVVSKMKARGYVK
CCCHHHHHHHCCCCCEEEEHHHHCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA