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The map label for this gene is 66047229

Identifier: 66047229

GI number: 66047229

Start: 4765718

End: 4766341

Strand: Direct

Name: 66047229

Synonym: Psyr_4002

Alternate gene names: NA

Gene position: 4765718-4766341 (Clockwise)

Preceding gene: 66047228

Following gene: 66047231

Centisome position: 78.21

GC content: 61.22

Gene sequence:

>624_bases
ATGTCAGACGCTATTCACTCCTACGAGCCATCCAAGGGTCACGGCCTGCCGCACGACCCGTTCAACGCGATTGTAGGCCC
ACGCCCGATTGGCTGGATTTCGTCGCAGGATGCCAACGGCAAACTCAACCTGGCACCTTACAGCTTCTTCAATGCGTTCA
ACTACGTGCCGCCGATTATCGGGTTCTGCAGCGTGGGCCGCAAAGACAGCCTCAATAATATCGAGCAGACCGGCGAGTTC
GTCTGGAACCTGGCGACCCGCTCGCTGGCCGAAGCCATGAACCAGAGCTGCGCACCGGTGGCGCCGGACGTCAGCGAATT
CGAACTGGCAAACCTGACACCACTGGCCTCGCAGATCGTCTCGGTGCCGCGTGTACTCGAAACGCCAGTGTCGTTCGAGT
GCAAGGTCACGCAGATCATTCAATTGCAACGCGCCGACAAGGAACTGGTGCCCAGCTGGTTGATTCTCGGCGAGGTGGTG
GCGGTGCACATCGACAAGTCGCTGCTCAAGGACGGCGTTTACGATACCGCCGCCGCCGAGCCGATTCTGCGCGGCGGCGG
CCCGGCGGATTACTTCCAGCTCGGCCCGGAAGCGCTGTTCAAGATGTTCCGCCCAGGCGCCTGA

Upstream 100 bases:

>100_bases
CATGTCTGGCTCAGGATGAAACACACACGCCCCTCTGGCATCCTCTGCAAATGCGCAGCACTATGCTGACATCCACTATT
GAGCCCATCAGGAACCGAGC

Downstream 100 bases:

>100_bases
TCAGGCGTCAGCCCAGACCGGTTCGCCCTCTGCATCGATATCGACCAGCCGCTGCAGCTCTTGCACAGCGGCCAGGTCGG
CATCATCGGCGGTCTTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MSDAIHSYEPSKGHGLPHDPFNAIVGPRPIGWISSQDANGKLNLAPYSFFNAFNYVPPIIGFCSVGRKDSLNNIEQTGEF
VWNLATRSLAEAMNQSCAPVAPDVSEFELANLTPLASQIVSVPRVLETPVSFECKVTQIIQLQRADKELVPSWLILGEVV
AVHIDKSLLKDGVYDTAAAEPILRGGGPADYFQLGPEALFKMFRPGA

Sequences:

>Translated_207_residues
MSDAIHSYEPSKGHGLPHDPFNAIVGPRPIGWISSQDANGKLNLAPYSFFNAFNYVPPIIGFCSVGRKDSLNNIEQTGEF
VWNLATRSLAEAMNQSCAPVAPDVSEFELANLTPLASQIVSVPRVLETPVSFECKVTQIIQLQRADKELVPSWLILGEVV
AVHIDKSLLKDGVYDTAAAEPILRGGGPADYFQLGPEALFKMFRPGA
>Mature_206_residues
SDAIHSYEPSKGHGLPHDPFNAIVGPRPIGWISSQDANGKLNLAPYSFFNAFNYVPPIIGFCSVGRKDSLNNIEQTGEFV
WNLATRSLAEAMNQSCAPVAPDVSEFELANLTPLASQIVSVPRVLETPVSFECKVTQIIQLQRADKELVPSWLILGEVVA
VHIDKSLLKDGVYDTAAAEPILRGGGPADYFQLGPEALFKMFRPGA

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 22481; Mature: 22350

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAIHSYEPSKGHGLPHDPFNAIVGPRPIGWISSQDANGKLNLAPYSFFNAFNYVPPII
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHH
GFCSVGRKDSLNNIEQTGEFVWNLATRSLAEAMNQSCAPVAPDVSEFELANLTPLASQIV
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHH
SVPRVLETPVSFECKVTQIIQLQRADKELVPSWLILGEVVAVHIDKSLLKDGVYDTAAAE
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
PILRGGGPADYFQLGPEALFKMFRPGA
HHHCCCCCHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure 
SDAIHSYEPSKGHGLPHDPFNAIVGPRPIGWISSQDANGKLNLAPYSFFNAFNYVPPII
CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHH
GFCSVGRKDSLNNIEQTGEFVWNLATRSLAEAMNQSCAPVAPDVSEFELANLTPLASQIV
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHH
SVPRVLETPVSFECKVTQIIQLQRADKELVPSWLILGEVVAVHIDKSLLKDGVYDTAAAE
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
PILRGGGPADYFQLGPEALFKMFRPGA
HHHCCCCCHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]