| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047228
Identifier: 66047228
GI number: 66047228
Start: 4765255
End: 4765572
Strand: Direct
Name: 66047228
Synonym: Psyr_4001
Alternate gene names: NA
Gene position: 4765255-4765572 (Clockwise)
Preceding gene: 66047226
Following gene: 66047229
Centisome position: 78.2
GC content: 61.01
Gene sequence:
>318_bases ATGAAAACCAACACACTGATCTTTGGCCTGGCTATCTCCGTTCTGGCTTCCAGCGCATTTGCACTTCCAGCCACCCACGT TCAAAGCGACCTGTCCAGCGCCACCCTCGTTGCTGAAGGCGGTACCAAACACACTAACGTCGGCTCGATCCGCGTATCGG CTGACGGCGCAGATCACGTCGGTGCCAACCGTCTCGCCGCTGATGGCGCAGACCGCGTCGGTGCCAACCGTCAGGCTGCC GATGGTGCAGACCACGTCGGTGCCAATCGTCTTGCTGCAGACGGTGCAGATCGCGTAGGCGCCAATCGTCTGGGCTGA
Upstream 100 bases:
>100_bases ATCGCTAGCAATCCTATTAACTTCTTAATAATCCGCTGGCGCGTAGCATTGCCTCCATACCGGGATGACAACTCACCCGA CACTCATTGGAGACATCATC
Downstream 100 bases:
>100_bases TCGCTCACGCAACACCCCCAAAGCCCGGCCGATGTCGGGCTTCTTCATGTCTGGCTCAGGATGAAACACACACGCCCCTC TGGCATCCTCTGCAAATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MKTNTLIFGLAISVLASSAFALPATHVQSDLSSATLVAEGGTKHTNVGSIRVSADGADHVGANRLAADGADRVGANRQAA DGADHVGANRLAADGADRVGANRLG
Sequences:
>Translated_105_residues MKTNTLIFGLAISVLASSAFALPATHVQSDLSSATLVAEGGTKHTNVGSIRVSADGADHVGANRLAADGADRVGANRQAA DGADHVGANRLAADGADRVGANRLG >Mature_105_residues MKTNTLIFGLAISVLASSAFALPATHVQSDLSSATLVAEGGTKHTNVGSIRVSADGADHVGANRLAADGADRVGANRQAA DGADHVGANRLAADGADRVGANRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10404; Mature: 10404
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNTLIFGLAISVLASSAFALPATHVQSDLSSATLVAEGGTKHTNVGSIRVSADGADHV CCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCC GANRLAADGADRVGANRQAADGADHVGANRLAADGADRVGANRLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTNTLIFGLAISVLASSAFALPATHVQSDLSSATLVAEGGTKHTNVGSIRVSADGADHV CCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCC GANRLAADGADRVGANRQAADGADHVGANRLAADGADRVGANRLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA