Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is catD [H]

Identifier: 66047142

GI number: 66047142

Start: 4658582

End: 4659574

Strand: Reverse

Name: catD [H]

Synonym: Psyr_3915

Alternate gene names: 66047142

Gene position: 4659574-4658582 (Counterclockwise)

Preceding gene: 66047143

Following gene: 66047141

Centisome position: 76.47

GC content: 60.73

Gene sequence:

>993_bases
ATGCGGGTTTTAATTTTTCTGGCCGCGCTTCTGTGCGGCTTGCCGTCTTTTGCGGCCGATCGTTGTGATACCGATGTTCC
TGTACAGATGGCCAACCTCAAGGATGTGCGGATTGCCTACCAGAGTATTGGCAGCGAGTCCGACCCTGCCTTGCTGTTGG
TGATGGGGCTGGGTGGGCAGTTGATTCACTGGCCGGACGAGGTCGTGGTCGCGTTGTGTCAGCAAGGCTATCGGGTGATT
CGTTACGACAATCGCGATGTGGGTCTGTCTTCGTGGGTGCAACAGCCAGCGGATGCCAATCTGACGTTCGAAGTGCTGCG
TTACAAACTTGGCCTGCCTGTCTCGGCACCCTATTCGTTGACTGATATGGCCGACGATGCGCTGGGTCTGATGGATGCAT
TGCAGATTCGCCAGTTTCACGTGTTGGGCGCGAGCATGGGCGGCATGATCGCTCAGCATCTGGCCGATCTGGCGCCGTCG
CGGGTCGAAAGCCTGACGCTGATCATGACCAGTTCCGGTGCGCAGGGTTTGCCTATGCCCAGTACCGCGCTGATGCAACT
GTTGGCGCGGCGCGGCGCGCCCAATCGGGAAGTGGCGATCGAGCAACAGGCCGATCTGCTTGCCGCGCTGGGCAGCCCGC
AGGTCAAGGACGATCGCCAGCAATTGCTGCATCAGGCGGCTGTTTCCTATGACCGGGCGTTCAATCCCGAAGGTGTGAAA
CGCCAGATCATGGCGATTCTGGCCGAGCCCAGCCGCGTGGAACTGCTGAACCGTCTGCGTCTGCCGGTACTGGTGGTTCA
CGGCACGGCTGACCCGCTGCTGCCGGTCATGCATGGTGTGCATGTGGCCGCGCACATTCAGGGCAGCCAGCTGCGCCTGA
TTCCGGGGCTGGCGCACCGTTTTCAGGAGGCCTTCAAGGCCCCGTTGCTCGGTGCAGTGCTGCCGTACCTGAAGGCCCAG
CATGAAGACGGACGCAACCTGGCTCAGTTGTAA

Upstream 100 bases:

>100_bases
TCAGCGCCATTCATCAAACTGTCACGCAAGTGTGGCAGCGCGCTTGGAAAAACATCATCAGACTCGCGGCCTACTGGGGT
TCTGTTTTTTGGTGTTTTTC

Downstream 100 bases:

>100_bases
GCCGGCCCGGTTGTCAGGCATGGGCAGAGGTGTATCGTGTGACCTTTGCTTACCGAAAAGGGCCGACATGACAACTGCAC
TGAAGATCGACTTCATCTCC

Product: Alpha/beta hydrolase fold

Products: NA

Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MRVLIFLAALLCGLPSFAADRCDTDVPVQMANLKDVRIAYQSIGSESDPALLLVMGLGGQLIHWPDEVVVALCQQGYRVI
RYDNRDVGLSSWVQQPADANLTFEVLRYKLGLPVSAPYSLTDMADDALGLMDALQIRQFHVLGASMGGMIAQHLADLAPS
RVESLTLIMTSSGAQGLPMPSTALMQLLARRGAPNREVAIEQQADLLAALGSPQVKDDRQQLLHQAAVSYDRAFNPEGVK
RQIMAILAEPSRVELLNRLRLPVLVVHGTADPLLPVMHGVHVAAHIQGSQLRLIPGLAHRFQEAFKAPLLGAVLPYLKAQ
HEDGRNLAQL

Sequences:

>Translated_330_residues
MRVLIFLAALLCGLPSFAADRCDTDVPVQMANLKDVRIAYQSIGSESDPALLLVMGLGGQLIHWPDEVVVALCQQGYRVI
RYDNRDVGLSSWVQQPADANLTFEVLRYKLGLPVSAPYSLTDMADDALGLMDALQIRQFHVLGASMGGMIAQHLADLAPS
RVESLTLIMTSSGAQGLPMPSTALMQLLARRGAPNREVAIEQQADLLAALGSPQVKDDRQQLLHQAAVSYDRAFNPEGVK
RQIMAILAEPSRVELLNRLRLPVLVVHGTADPLLPVMHGVHVAAHIQGSQLRLIPGLAHRFQEAFKAPLLGAVLPYLKAQ
HEDGRNLAQL
>Mature_330_residues
MRVLIFLAALLCGLPSFAADRCDTDVPVQMANLKDVRIAYQSIGSESDPALLLVMGLGGQLIHWPDEVVVALCQQGYRVI
RYDNRDVGLSSWVQQPADANLTFEVLRYKLGLPVSAPYSLTDMADDALGLMDALQIRQFHVLGASMGGMIAQHLADLAPS
RVESLTLIMTSSGAQGLPMPSTALMQLLARRGAPNREVAIEQQADLLAALGSPQVKDDRQQLLHQAAVSYDRAFNPEGVK
RQIMAILAEPSRVELLNRLRLPVLVVHGTADPLLPVMHGVHVAAHIQGSQLRLIPGLAHRFQEAFKAPLLGAVLPYLKAQ
HEDGRNLAQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012790 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.24 [H]

Molecular weight: Translated: 35868; Mature: 35868

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLIFLAALLCGLPSFAADRCDTDVPVQMANLKDVRIAYQSIGSESDPALLLVMGLGGQ
CHHHHHHHHHHHCCCCHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCC
LIHWPDEVVVALCQQGYRVIRYDNRDVGLSSWVQQPADANLTFEVLRYKLGLPVSAPYSL
EEECHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCH
TDMADDALGLMDALQIRQFHVLGASMGGMIAQHLADLAPSRVESLTLIMTSSGAQGLPMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEEEEEECCCCCCCCCC
STALMQLLARRGAPNREVAIEQQADLLAALGSPQVKDDRQQLLHQAAVSYDRAFNPEGVK
HHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
RQIMAILAEPSRVELLNRLRLPVLVVHGTADPLLPVMHGVHVAAHIQGSQLRLIPGLAHR
HHHHHHHCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHEEEEECCCCEEECHHHHHH
FQEAFKAPLLGAVLPYLKAQHEDGRNLAQL
HHHHHHCHHHHHHHHHHHHCCCCCCHHHCC
>Mature Secondary Structure
MRVLIFLAALLCGLPSFAADRCDTDVPVQMANLKDVRIAYQSIGSESDPALLLVMGLGGQ
CHHHHHHHHHHHCCCCHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCC
LIHWPDEVVVALCQQGYRVIRYDNRDVGLSSWVQQPADANLTFEVLRYKLGLPVSAPYSL
EEECHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCH
TDMADDALGLMDALQIRQFHVLGASMGGMIAQHLADLAPSRVESLTLIMTSSGAQGLPMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEEEEEECCCCCCCCCC
STALMQLLARRGAPNREVAIEQQADLLAALGSPQVKDDRQQLLHQAAVSYDRAFNPEGVK
HHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
RQIMAILAEPSRVELLNRLRLPVLVVHGTADPLLPVMHGVHVAAHIQGSQLRLIPGLAHR
HHHHHHHCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHEEEEECCCCEEECHHHHHH
FQEAFKAPLLGAVLPYLKAQHEDGRNLAQL
HHHHHHCHHHHHHHHHHHHCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8125318; 670169 [H]