| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047034
Identifier: 66047034
GI number: 66047034
Start: 4526331
End: 4526816
Strand: Direct
Name: 66047034
Synonym: Psyr_3806
Alternate gene names: NA
Gene position: 4526331-4526816 (Clockwise)
Preceding gene: 66047033
Following gene: 66047035
Centisome position: 74.28
GC content: 41.15
Gene sequence:
>486_bases GTGTTGCTATCTCGACTATTGGTAACCACTGAGTTTTTGGCGCGTACTTACACAGATCAAATTTCTGGAGCAAAGTGTCA AGAAGCTATAAACGAGGCGTGCAAGATACACAGCTATAGATATGGCTACAAACTGATAAGCGAGAGGCAGATCAAAGAAA TCTTAAACGTAAACAATCAAGTCACAACACTTAGAGCAACCAGGAAAAAATTCGCACATTTCTGCTGGCCACGTAGTAAT GATGAAGAAATCTTCGGCGCTAACTTTTCCGGTGGTGTTGCTGTAGGGAGCAAGTACAAAAAAAGCTTTGTTTCTTTCAC CTTGGCTGAACTTGATGAACTCCACAAAAAAGCATATGCAATTATTGATAGACTATCAGACACAACTCAGAGTCTTCCAG AGCTGGAAGAGGAAGACTTAAGTAACAAAGTTAGGCTCCCCCGAGAGGGGGCATATGTTTATCTTTCGATCCAAGTCAAG TTTTAA
Upstream 100 bases:
>100_bases CTTAAATCATTCATCGCAGCATGCGGAGCTCACTGACAAACACTTTCAGTCTATCGGCAGACTTTCAGCTGAGCGGTCAA ATATTGAATTTCTGCTTGGC
Downstream 100 bases:
>100_bases CTTCGAATAAAATCCGGTTTTAATAGACTTATTGAAGAGCAGCTATTGACCGATTCTGTTGAAAACAGTCGGATTTTCAA ACTGGAAAATTTCGAGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MLLSRLLVTTEFLARTYTDQISGAKCQEAINEACKIHSYRYGYKLISERQIKEILNVNNQVTTLRATRKKFAHFCWPRSN DEEIFGANFSGGVAVGSKYKKSFVSFTLAELDELHKKAYAIIDRLSDTTQSLPELEEEDLSNKVRLPREGAYVYLSIQVK F
Sequences:
>Translated_161_residues MLLSRLLVTTEFLARTYTDQISGAKCQEAINEACKIHSYRYGYKLISERQIKEILNVNNQVTTLRATRKKFAHFCWPRSN DEEIFGANFSGGVAVGSKYKKSFVSFTLAELDELHKKAYAIIDRLSDTTQSLPELEEEDLSNKVRLPREGAYVYLSIQVK F >Mature_161_residues MLLSRLLVTTEFLARTYTDQISGAKCQEAINEACKIHSYRYGYKLISERQIKEILNVNNQVTTLRATRKKFAHFCWPRSN DEEIFGANFSGGVAVGSKYKKSFVSFTLAELDELHKKAYAIIDRLSDTTQSLPELEEEDLSNKVRLPREGAYVYLSIQVK F
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18467; Mature: 18467
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSRLLVTTEFLARTYTDQISGAKCQEAINEACKIHSYRYGYKLISERQIKEILNVNNQ CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VTTLRATRKKFAHFCWPRSNDEEIFGANFSGGVAVGSKYKKSFVSFTLAELDELHKKAYA HHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHH IIDRLSDTTQSLPELEEEDLSNKVRLPREGAYVYLSIQVKF HHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MLLSRLLVTTEFLARTYTDQISGAKCQEAINEACKIHSYRYGYKLISERQIKEILNVNNQ CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VTTLRATRKKFAHFCWPRSNDEEIFGANFSGGVAVGSKYKKSFVSFTLAELDELHKKAYA HHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHH IIDRLSDTTQSLPELEEEDLSNKVRLPREGAYVYLSIQVKF HHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA