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The map label for this gene is smf [H]

Identifier: 66047033

GI number: 66047033

Start: 4524298

End: 4525665

Strand: Direct

Name: smf [H]

Synonym: Psyr_3805

Alternate gene names: 66047033

Gene position: 4524298-4525665 (Clockwise)

Preceding gene: 66047032

Following gene: 66047034

Centisome position: 74.25

GC content: 52.63

Gene sequence:

>1368_bases
ATGATAAATACCAATACTCAGTCGATCCTCCTACTAACGTCTTATTTTTCAAAATCTGTAGGTGGTGCCAAACCGCTATC
TCCGACGGAATGGGGACGATTTGCCCAATGGCTAAACGCGCAGGGCAAGACGCCTGCAGACTTAGTGACTGCTGAGCCAC
ATGCTGTGCTTGAGGGCTGGCATGATGAAAAAATACCATTGCTGCGCATTGAGCAGTTGCTCGAGCGAGGCCATGCGCTG
GCCTTGGCTTTGGAGAAGTGGAGCCGGGCTGGATTGTGGGTGCTGACACGATCAGATGCTGACTATCCTAAGGCGCTCAA
GCATCACTTACGTAACAGCGCGCCACCGATACTCTTCGGTTGTGGAAATCCGCGACTGCTGAATCAACGTGGAATTGGTG
TTGTCGGCGCACGTAAGGCGGATGATGCCGACCTTGCATACGCCACGTCTTTAGGTAAACGCATCGCGATGGCCGGCATG
ACCGTAGTCTCGGGTGGCGCTCGGGGCGTCGATGAAGCTGCGATGCAGGGCGGATTGAACGAAGAAGGAACTGTAATTGG
CATTATGGCTGATAGCCTTTTGTCGGCAGCGCTAGCCAGCAAATGGCGGAATGGGTTGATGAGCAACAACCTGGTACTGG
TTTCACCATTTTTTCCCGAGGCCGGATTCAACGCCGGCAATGCAATGGCTAGGAACAAATACATTTACTGCCTGAGTCAG
GCTGCAGTGGTCGTTCGCTCCGAAACCAGAGGCGGAACCTGGAACGGTGCCATCGAAAACTTGAAAAAAGCTTGGGTGCC
CCTGTGGGTTAAGCGAGATACGAACCCGGAATCCGGAAATTACGCGTTGGTATCACAAGGTGCGCAATGGCTGGAATCAG
CAGCGAAGCATGTGGATGTGCATACGCTGAGTGCCCAAGCTAAGCCAGAGTCTGACCCAGAGATGGTGCCGGAGTTAGCA
CCAACTGACCAAGATGCTTCTATCTCTGAAGAAGACCCCGTCAGATCGCCCCCCCCCCGAGACGAGGCGCCACACCAACT
TTCCCGAGATGATGGTAGGAGTAGTCAGAATGCTAATTCTGCTTCGACTCACGCCACAACTATTGGCGACCTGAGTTTTT
ATCAATTTTTTCTAAGGAAGATGGCACTCCGGGATAGTCCAGGAACCGCTGAGGAGCTAAGCGAGCAATGGGGTATCTCA
AAGAAACAGCTCACTGAATGGCTCAAGCAGTCAGTCGATGAAAGACACGTTCAAAAGCTGAAAAACCCTGTTCGCTTCCA
GTCGTTGGATGTCGGAAAATTCGAGGGCAGCATCGGGAAGAACTTAGACCCTTCATCCGATGGGCAACTGGGGTTCAAGC
TGGATTGA

Upstream 100 bases:

>100_bases
TCGATTCAGGCTGGACAATGACCGTCATTGCCGCACTGCTCAAACAAGCGGGCAGCGAACACGTCTACCCGCTGGCAATC
TCATCTACGGCAAGCAACGC

Downstream 100 bases:

>100_bases
TAGCTCATGACCCGAACCGTTGAGCAAGTAATCCGGTCAGCAGTCGGATTATTTTGAGCATTCATGACGTGCTTTTAATC
GCCCGTCCCCTCACCAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MINTNTQSILLLTSYFSKSVGGAKPLSPTEWGRFAQWLNAQGKTPADLVTAEPHAVLEGWHDEKIPLLRIEQLLERGHAL
ALALEKWSRAGLWVLTRSDADYPKALKHHLRNSAPPILFGCGNPRLLNQRGIGVVGARKADDADLAYATSLGKRIAMAGM
TVVSGGARGVDEAAMQGGLNEEGTVIGIMADSLLSAALASKWRNGLMSNNLVLVSPFFPEAGFNAGNAMARNKYIYCLSQ
AAVVVRSETRGGTWNGAIENLKKAWVPLWVKRDTNPESGNYALVSQGAQWLESAAKHVDVHTLSAQAKPESDPEMVPELA
PTDQDASISEEDPVRSPPPRDEAPHQLSRDDGRSSQNANSASTHATTIGDLSFYQFFLRKMALRDSPGTAEELSEQWGIS
KKQLTEWLKQSVDERHVQKLKNPVRFQSLDVGKFEGSIGKNLDPSSDGQLGFKLD

Sequences:

>Translated_455_residues
MINTNTQSILLLTSYFSKSVGGAKPLSPTEWGRFAQWLNAQGKTPADLVTAEPHAVLEGWHDEKIPLLRIEQLLERGHAL
ALALEKWSRAGLWVLTRSDADYPKALKHHLRNSAPPILFGCGNPRLLNQRGIGVVGARKADDADLAYATSLGKRIAMAGM
TVVSGGARGVDEAAMQGGLNEEGTVIGIMADSLLSAALASKWRNGLMSNNLVLVSPFFPEAGFNAGNAMARNKYIYCLSQ
AAVVVRSETRGGTWNGAIENLKKAWVPLWVKRDTNPESGNYALVSQGAQWLESAAKHVDVHTLSAQAKPESDPEMVPELA
PTDQDASISEEDPVRSPPPRDEAPHQLSRDDGRSSQNANSASTHATTIGDLSFYQFFLRKMALRDSPGTAEELSEQWGIS
KKQLTEWLKQSVDERHVQKLKNPVRFQSLDVGKFEGSIGKNLDPSSDGQLGFKLD
>Mature_455_residues
MINTNTQSILLLTSYFSKSVGGAKPLSPTEWGRFAQWLNAQGKTPADLVTAEPHAVLEGWHDEKIPLLRIEQLLERGHAL
ALALEKWSRAGLWVLTRSDADYPKALKHHLRNSAPPILFGCGNPRLLNQRGIGVVGARKADDADLAYATSLGKRIAMAGM
TVVSGGARGVDEAAMQGGLNEEGTVIGIMADSLLSAALASKWRNGLMSNNLVLVSPFFPEAGFNAGNAMARNKYIYCLSQ
AAVVVRSETRGGTWNGAIENLKKAWVPLWVKRDTNPESGNYALVSQGAQWLESAAKHVDVHTLSAQAKPESDPEMVPELA
PTDQDASISEEDPVRSPPPRDEAPHQLSRDDGRSSQNANSASTHATTIGDLSFYQFFLRKMALRDSPGTAEELSEQWGIS
KKQLTEWLKQSVDERHVQKLKNPVRFQSLDVGKFEGSIGKNLDPSSDGQLGFKLD

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 49511; Mature: 49511

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINTNTQSILLLTSYFSKSVGGAKPLSPTEWGRFAQWLNAQGKTPADLVTAEPHAVLEGW
CCCCCCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHEEECCCHHHHCCC
HDEKIPLLRIEQLLERGHALALALEKWSRAGLWVLTRSDADYPKALKHHLRNSAPPILFG
CCCCCHHHHHHHHHHCCCCEEEHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEE
CGNPRLLNQRGIGVVGARKADDADLAYATSLGKRIAMAGMTVVSGGARGVDEAAMQGGLN
CCCCCEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCHHEECCCCCCHHHHHHHCCCC
EEGTVIGIMADSLLSAALASKWRNGLMSNNLVLVSPFFPEAGFNAGNAMARNKYIYCLSQ
CCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHCCCEEEEEEC
AAVVVRSETRGGTWNGAIENLKKAWVPLWVKRDTNPESGNYALVSQGAQWLESAAKHVDV
CEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCE
HTLSAQAKPESDPEMVPELAPTDQDASISEEDPVRSPPPRDEAPHQLSRDDGRSSQNANS
EEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASTHATTIGDLSFYQFFLRKMALRDSPGTAEELSEQWGISKKQLTEWLKQSVDERHVQKL
CCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KNPVRFQSLDVGKFEGSIGKNLDPSSDGQLGFKLD
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINTNTQSILLLTSYFSKSVGGAKPLSPTEWGRFAQWLNAQGKTPADLVTAEPHAVLEGW
CCCCCCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHEEECCCHHHHCCC
HDEKIPLLRIEQLLERGHALALALEKWSRAGLWVLTRSDADYPKALKHHLRNSAPPILFG
CCCCCHHHHHHHHHHCCCCEEEHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEE
CGNPRLLNQRGIGVVGARKADDADLAYATSLGKRIAMAGMTVVSGGARGVDEAAMQGGLN
CCCCCEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCHHEECCCCCCHHHHHHHCCCC
EEGTVIGIMADSLLSAALASKWRNGLMSNNLVLVSPFFPEAGFNAGNAMARNKYIYCLSQ
CCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHCCCEEEEEEC
AAVVVRSETRGGTWNGAIENLKKAWVPLWVKRDTNPESGNYALVSQGAQWLESAAKHVDV
CEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCE
HTLSAQAKPESDPEMVPELAPTDQDASISEEDPVRSPPPRDEAPHQLSRDDGRSSQNANS
EEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASTHATTIGDLSFYQFFLRKMALRDSPGTAEELSEQWGISKKQLTEWLKQSVDERHVQKL
CCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KNPVRFQSLDVGKFEGSIGKNLDPSSDGQLGFKLD
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]