| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047023
Identifier: 66047023
GI number: 66047023
Start: 4512941
End: 4513354
Strand: Direct
Name: 66047023
Synonym: Psyr_3795
Alternate gene names: NA
Gene position: 4512941-4513354 (Clockwise)
Preceding gene: 66047022
Following gene: 66047025
Centisome position: 74.06
GC content: 62.8
Gene sequence:
>414_bases ATGAGCCGCGAAGTCAGACAGATCACCCCCGATGTGCAGGAAATCATCCAGCACGCCTTGCGCTCGCTGCTGGGCAAAGG CTTCGTCATCGCGCTGTTCGGCAGCGAAGATGCAACCGGGGCCATGCACTACCACCTGCGCATCGACCACGACGCCACGG GGCTGGGCATCGAGCATCACGACCACGTCGAAGACGGCTTCATCGACGACATCTTCATGCTCGCCACCCGCATGAAAGCC ATGCTAAAGCAACGCGAAACTCTGTCTCGCATGCACGGCGGCAGCCAGGCGACGGGCCAGGTGCGGCTACTGACCTGGAT CACCGAGGACAACAGCCAGACGGTCATGCAAACCGCCGAGGCTGCGGGGCGCGAGTGTTTAAGTGCGTTGCGCGAGCGCA GGCTGCGGGCTTGA
Upstream 100 bases:
>100_bases TGAACAAGGCGTCTTTACCCAGCATTACCTGGCCCGGACCGCGCTTTACATCCCGTCGTTGAATACTGCCTGCACTACTC ATCAGGTCAGGAGTTGTTAC
Downstream 100 bases:
>100_bases GTCATAGGCGCCGCACGGCTTAATCGATGGCCGCGACCATCAGTTCTCGCAGCCACCTGTGAGCCGGATCGCGGTGCAAA CGCTCTGGCCACAGCATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSREVRQITPDVQEIIQHALRSLLGKGFVIALFGSEDATGAMHYHLRIDHDATGLGIEHHDHVEDGFIDDIFMLATRMKA MLKQRETLSRMHGGSQATGQVRLLTWITEDNSQTVMQTAEAAGRECLSALRERRLRA
Sequences:
>Translated_137_residues MSREVRQITPDVQEIIQHALRSLLGKGFVIALFGSEDATGAMHYHLRIDHDATGLGIEHHDHVEDGFIDDIFMLATRMKA MLKQRETLSRMHGGSQATGQVRLLTWITEDNSQTVMQTAEAAGRECLSALRERRLRA >Mature_136_residues SREVRQITPDVQEIIQHALRSLLGKGFVIALFGSEDATGAMHYHLRIDHDATGLGIEHHDHVEDGFIDDIFMLATRMKAM LKQRETLSRMHGGSQATGQVRLLTWITEDNSQTVMQTAEAAGRECLSALRERRLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15423; Mature: 15292
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSREVRQITPDVQEIIQHALRSLLGKGFVIALFGSEDATGAMHYHLRIDHDATGLGIEHH CCCCHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCC DHVEDGFIDDIFMLATRMKAMLKQRETLSRMHGGSQATGQVRLLTWITEDNSQTVMQTAE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHH AAGRECLSALRERRLRA HHHHHHHHHHHHHHCCC >Mature Secondary Structure SREVRQITPDVQEIIQHALRSLLGKGFVIALFGSEDATGAMHYHLRIDHDATGLGIEHH CCCHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCC DHVEDGFIDDIFMLATRMKAMLKQRETLSRMHGGSQATGQVRLLTWITEDNSQTVMQTAE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHH AAGRECLSALRERRLRA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA