| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046992
Identifier: 66046992
GI number: 66046992
Start: 4482357
End: 4483226
Strand: Reverse
Name: 66046992
Synonym: Psyr_3764
Alternate gene names: NA
Gene position: 4483226-4482357 (Counterclockwise)
Preceding gene: 66046993
Following gene: 66046986
Centisome position: 73.57
GC content: 52.3
Gene sequence:
>870_bases ATGCGAGTCATAAGTTCCGGAGCAGATGCACTGATAGCCGCGCAACAACTTGATGATAAAAGAGCAGCAAAGACCATATC CTCAATTGCCAATCCCCCCCTTCGATCAACCTCTCCAGACTCTGCGGTGACCATCAGCGGCCAGGCCCTCCTGAAACACA GGGTATTTGGGGTCGCGGACTCTGGTCGTTCTGCGCCCATGCTCGGGAAAGCCGAATGTGGAATGTCCATGCCCGAGGCG TTTTTTTTAACCCGGGATGATCGCAGGCTGCTGGGTGATGTTTATGAATGGGCAAGCGCTCAGGGAGCTGATCTGGGCTA TGTTGATGATCTGGCTTTTGGGCTGGCCTCATATAGAGAGAAAGATGATGGAAGAATATGGGGCCGCCAGAACCAGGGCA AAACATATGACCTCGAAGGCCACAAGGTTTTCTACAGTTTTACCGAGCCGCACGCGGCCACCGCCAAGCGTATTACCGAG AGCGATGGGCTAAAAACAACACGGCTGGACCAGGGGTTTGTTCGCTTCATCACTGACAAGGACTACGGCTCCATAGGGCA CAATAATTTTGAGTTCATGGAAAAAGTCATCAACCGGTTTTCAACGGCGGGGGAAAGAGACGAGCAACTGGGGGCAGATT TCACTACCTATAAAAGCCAGAAGAGTGACTACATAAGGACGCTGTCCAAGGAAACGTACACTCCCGGCGAAGGAGACTCT CGAGAAACGCCATCCGTAAAAAAAGCCACCAAACCCAAGGAAATAACCCTGGAAAGCCTGCGTAACGACATGCGCGAGAC GTTCCTGAAAGCGATGGGGGTCAAGAGTCTCTCATCCCTGTTCGACATGCTGTTCAAGGACAGGCGTTGA
Upstream 100 bases:
>100_bases CAAGCCTGCCGGGCCAGAAACAGTCACCTTTCATTTAACGTACTGATTGTTAATCCCTGGCGATAACCGTCAGGGATCTT TCGGGGCAGGAGCCAACGTC
Downstream 100 bases:
>100_bases CAGGTCAGGCCTGTGCGCCAAGCGACTGGAGTTCTGGCGGCGCATCCTGAGGGCTGGCGACGCGGTTGCGGCCTGTGCTT TTGGCCAGATACAGCGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MRVISSGADALIAAQQLDDKRAAKTISSIANPPLRSTSPDSAVTISGQALLKHRVFGVADSGRSAPMLGKAECGMSMPEA FFLTRDDRRLLGDVYEWASAQGADLGYVDDLAFGLASYREKDDGRIWGRQNQGKTYDLEGHKVFYSFTEPHAATAKRITE SDGLKTTRLDQGFVRFITDKDYGSIGHNNFEFMEKVINRFSTAGERDEQLGADFTTYKSQKSDYIRTLSKETYTPGEGDS RETPSVKKATKPKEITLESLRNDMRETFLKAMGVKSLSSLFDMLFKDRR
Sequences:
>Translated_289_residues MRVISSGADALIAAQQLDDKRAAKTISSIANPPLRSTSPDSAVTISGQALLKHRVFGVADSGRSAPMLGKAECGMSMPEA FFLTRDDRRLLGDVYEWASAQGADLGYVDDLAFGLASYREKDDGRIWGRQNQGKTYDLEGHKVFYSFTEPHAATAKRITE SDGLKTTRLDQGFVRFITDKDYGSIGHNNFEFMEKVINRFSTAGERDEQLGADFTTYKSQKSDYIRTLSKETYTPGEGDS RETPSVKKATKPKEITLESLRNDMRETFLKAMGVKSLSSLFDMLFKDRR >Mature_289_residues MRVISSGADALIAAQQLDDKRAAKTISSIANPPLRSTSPDSAVTISGQALLKHRVFGVADSGRSAPMLGKAECGMSMPEA FFLTRDDRRLLGDVYEWASAQGADLGYVDDLAFGLASYREKDDGRIWGRQNQGKTYDLEGHKVFYSFTEPHAATAKRITE SDGLKTTRLDQGFVRFITDKDYGSIGHNNFEFMEKVINRFSTAGERDEQLGADFTTYKSQKSDYIRTLSKETYTPGEGDS RETPSVKKATKPKEITLESLRNDMRETFLKAMGVKSLSSLFDMLFKDRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32207; Mature: 32207
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVISSGADALIAAQQLDDKRAAKTISSIANPPLRSTSPDSAVTISGQALLKHRVFGVAD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHCCCC SGRSAPMLGKAECGMSMPEAFFLTRDDRRLLGDVYEWASAQGADLGYVDDLAFGLASYRE CCCCCCCCCHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC KDDGRIWGRQNQGKTYDLEGHKVFYSFTEPHAATAKRITESDGLKTTRLDQGFVRFITDK CCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHCCCCEEEHHCCCHHEEECCC DYGSIGHNNFEFMEKVINRFSTAGERDEQLGADFTTYKSQKSDYIRTLSKETYTPGEGDS CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC RETPSVKKATKPKEITLESLRNDMRETFLKAMGVKSLSSLFDMLFKDRR CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC >Mature Secondary Structure MRVISSGADALIAAQQLDDKRAAKTISSIANPPLRSTSPDSAVTISGQALLKHRVFGVAD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHCCCC SGRSAPMLGKAECGMSMPEAFFLTRDDRRLLGDVYEWASAQGADLGYVDDLAFGLASYRE CCCCCCCCCHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC KDDGRIWGRQNQGKTYDLEGHKVFYSFTEPHAATAKRITESDGLKTTRLDQGFVRFITDK CCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHCCCCEEEHHCCCHHEEECCC DYGSIGHNNFEFMEKVINRFSTAGERDEQLGADFTTYKSQKSDYIRTLSKETYTPGEGDS CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC RETPSVKKATKPKEITLESLRNDMRETFLKAMGVKSLSSLFDMLFKDRR CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA