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The map label for this gene is opuAC [H]

Identifier: 66046986

GI number: 66046986

Start: 4474707

End: 4475561

Strand: Reverse

Name: opuAC [H]

Synonym: Psyr_3758

Alternate gene names: 66046986

Gene position: 4475561-4474707 (Counterclockwise)

Preceding gene: 66046992

Following gene: 66046985

Centisome position: 73.45

GC content: 57.78

Gene sequence:

>855_bases
ATGATGATGCGAAAAATACTGGGGGCGGGTGCCGCTCTGGTACTTGCGGTCAGCTCCACGCTGGCGATTGCCGAAACCAA
GACCCTGACCATTGGCTATGTGGAAGGCTGGTCCGACAGTGTCGCCACCACCTTCGTGGCTTCCGAGGTGATCAAGCAAA
AGCTTGGCTATGACGTCAAGTTGCAGTCTGTCGCTGCAGGGATCATGTGGCAGGCGGTGGCAACCGACAAGCTGGACCTG
ATGCTGTCTGCGTGGCTTCCGGGCACGCATGGCGAGTACTACGCCAAGTACAAGGATCAGGTCGTCAACTACGGCCCCAA
CTTCAAGGACGCCAAGATTGGCTTGATCGTGCCTGAGTACGTCAAGGCCAAAACCATCGAAGACCTGAAGACTGATGCCT
CCTTCAACAAGAAGATCACCGGGATCGATGCGGGCTCGGGCGTGATGCTCAAGACCGATCAGGCCATCAAGGACTACGGT
CTGGACGGCTATAAGCTGCAGGCGAGCTCCGGCGCAGGCATGATCGCCGAGCTGACCCGCGCAGAGAAGGCGAAGAAATC
CATCGTGGTTACCGGCTGGGTGCCGCACTGGATGTTCGCCAAGTGGAAACTGCGTTTCCTGGACGACCCGAAAGGTGTCT
ATGGCGAGGCTGAAACCGTCGACAACGTTGCCAGCCTGGGGCTGGAGAAAAAAGCGCCTGAGGTCGTGGCCTTCCTGAAA
AAATTCCAGTGGGCATCCAAGGACGAAATCGGTGAAGTGATGCTGGCGATTCAGGACGGTGCCAAACCTGAAGCGGCAGC
AAAGGACTGGGTCGCCAAGCACCCGGATCGCGTTGCTGCATGGACTGCCAAATAG

Upstream 100 bases:

>100_bases
CAAGGCGCCGCGTGCCCCAAGGTCGGGCGCGAGGGCGGTCTGGAGAACAACGTTAACCATGTTCCGACAACCGTCGGTGC
AGACTTCCGGGGAAGCGACA

Downstream 100 bases:

>100_bases
TCGCAAAGTGTCTGAACAGCCCTTCTCAAGGCCGTCTGGTGTTGTCGCCAGACGGCCTTTCGTTTTTCCGCTCCGAAGTA
TTTTCCGTGCGACCGACTGC

Product: substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MMMRKILGAGAALVLAVSSTLAIAETKTLTIGYVEGWSDSVATTFVASEVIKQKLGYDVKLQSVAAGIMWQAVATDKLDL
MLSAWLPGTHGEYYAKYKDQVVNYGPNFKDAKIGLIVPEYVKAKTIEDLKTDASFNKKITGIDAGSGVMLKTDQAIKDYG
LDGYKLQASSGAGMIAELTRAEKAKKSIVVTGWVPHWMFAKWKLRFLDDPKGVYGEAETVDNVASLGLEKKAPEVVAFLK
KFQWASKDEIGEVMLAIQDGAKPEAAAKDWVAKHPDRVAAWTAK

Sequences:

>Translated_284_residues
MMMRKILGAGAALVLAVSSTLAIAETKTLTIGYVEGWSDSVATTFVASEVIKQKLGYDVKLQSVAAGIMWQAVATDKLDL
MLSAWLPGTHGEYYAKYKDQVVNYGPNFKDAKIGLIVPEYVKAKTIEDLKTDASFNKKITGIDAGSGVMLKTDQAIKDYG
LDGYKLQASSGAGMIAELTRAEKAKKSIVVTGWVPHWMFAKWKLRFLDDPKGVYGEAETVDNVASLGLEKKAPEVVAFLK
KFQWASKDEIGEVMLAIQDGAKPEAAAKDWVAKHPDRVAAWTAK
>Mature_284_residues
MMMRKILGAGAALVLAVSSTLAIAETKTLTIGYVEGWSDSVATTFVASEVIKQKLGYDVKLQSVAAGIMWQAVATDKLDL
MLSAWLPGTHGEYYAKYKDQVVNYGPNFKDAKIGLIVPEYVKAKTIEDLKTDASFNKKITGIDAGSGVMLKTDQAIKDYG
LDGYKLQASSGAGMIAELTRAEKAKKSIVVTGWVPHWMFAKWKLRFLDDPKGVYGEAETVDNVASLGLEKKAPEVVAFLK
KFQWASKDEIGEVMLAIQDGAKPEAAAKDWVAKHPDRVAAWTAK

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 30884; Mature: 30884

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMRKILGAGAALVLAVSSTLAIAETKTLTIGYVEGWSDSVATTFVASEVIKQKLGYDVK
CCHHHHHCCCHHEEHHHHHHHEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
LQSVAAGIMWQAVATDKLDLMLSAWLPGTHGEYYAKYKDQVVNYGPNFKDAKIGLIVPEY
EHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECHHH
VKAKTIEDLKTDASFNKKITGIDAGSGVMLKTDQAIKDYGLDGYKLQASSGAGMIAELTR
HHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCHHHHHCCCCCEEEECCCCCCHHHHHHH
AEKAKKSIVVTGWVPHWMFAKWKLRFLDDPKGVYGEAETVDNVASLGLEKKAPEVVAFLK
HHHHHCCEEEEECCCHHHHEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
KFQWASKDEIGEVMLAIQDGAKPEAAAKDWVAKHPDRVAAWTAK
HHCCCCCCCHHHEEEEEECCCCCCHHHHHHHHCCCCCCEEECCC
>Mature Secondary Structure
MMMRKILGAGAALVLAVSSTLAIAETKTLTIGYVEGWSDSVATTFVASEVIKQKLGYDVK
CCHHHHHCCCHHEEHHHHHHHEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
LQSVAAGIMWQAVATDKLDLMLSAWLPGTHGEYYAKYKDQVVNYGPNFKDAKIGLIVPEY
EHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECHHH
VKAKTIEDLKTDASFNKKITGIDAGSGVMLKTDQAIKDYGLDGYKLQASSGAGMIAELTR
HHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCHHHHHCCCCCEEEECCCCCCHHHHHHH
AEKAKKSIVVTGWVPHWMFAKWKLRFLDDPKGVYGEAETVDNVASLGLEKKAPEVVAFLK
HHHHHCCEEEEECCCHHHHEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
KFQWASKDEIGEVMLAIQDGAKPEAAAKDWVAKHPDRVAAWTAK
HHCCCCCCCHHHEEEEEECCCCCCHHHHHHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]