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The map label for this gene is vacJ [C]

Identifier: 66046988

GI number: 66046988

Start: 4478033

End: 4478845

Strand: Direct

Name: vacJ [C]

Synonym: Psyr_3760

Alternate gene names: 66046988

Gene position: 4478033-4478845 (Clockwise)

Preceding gene: 66046987

Following gene: 66046989

Centisome position: 73.49

GC content: 60.02

Gene sequence:

>813_bases
GTGGCTAAACGTCTTTTACTTCTTGCCGCTCTGCTCTGTGCCGGCACAGTCCAGGCCGCTGACGCGGATACCAGCAACAA
GGCTCAGCACCCGGCCACGGTGGCCCGTCAGACCGATGCTGACGGCTTTACCCAGCCGCTGAAGTCGCTGCAATTCAACC
CGGGGCTGGATCAGCGTGAGTTCGAGCGCGCCTCCATCAACGCACTGGAAGTCTATGATCCGCTGGAATCCTGGAACCGC
CGGGTCTACCACTTCAACTACCGTTTCGATGAATGGGTATTCCTGCCGGTCGTGGACGGCTACCGCTACATCACCCCTGG
CTTCGTGCGCAGCGGTGTGAGCAACTTTTTCAGCAACCTGGGTGACGTCTCCAACCTGCTGAACAGCCTGCTGCAGTTCA
AGGGCGAGCGCTCGCTGGACACCACTGGCCGTCTGCTGCTCAACACCACCATCGGCATCGCCGGTCTGTGGGACCCGGCG
ACCATGATGGGCCTGCCGCGCCAGAGCGAAGACTTCGGCCAGACGCTGGGCTTCTACGGTGTGCCGTCCGGGCCTTATCT
GGTGTTGCCATTGTTCGGTCCATCGAACCTGCGTGACACCGGCGGCATGCTGTTCGATTACACGGCTGAAAACCAGATCA
ACTTCCTCAACGTGGCCGAAGTCAGCAGCGACCATCCGGAAATCACCGTGTTGCGTGCCATTGACCGCCGTTACGTCACC
AGCTTCCGTTACGGCCAGCTCAACTCGCCGTTCGAGTATGAAAAAGTGCGCTACGTCTACACCGAGTCGCGCAAGCTGCA
GATCGCCGAATAA

Upstream 100 bases:

>100_bases
CGCAAGACCTTTGGCGATCGCCTGACCGTTTACCCGTACGGCGGGCATTGCGGCAACCTTAATTACCGCGTCAACACCGA
CGCCATGCTGGAGTTTTTCC

Downstream 100 bases:

>100_bases
GCGTAACGCAGTAAAACGACGGCCAGCCGGAGTGATCGGGCTGGTCGTTTTTTTATGGGCACTTTTACCTGCCTGGTTAA
TCACATGCCTCAGGCGCAAA

Product: VacJ-like lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MAKRLLLLAALLCAGTVQAADADTSNKAQHPATVARQTDADGFTQPLKSLQFNPGLDQREFERASINALEVYDPLESWNR
RVYHFNYRFDEWVFLPVVDGYRYITPGFVRSGVSNFFSNLGDVSNLLNSLLQFKGERSLDTTGRLLLNTTIGIAGLWDPA
TMMGLPRQSEDFGQTLGFYGVPSGPYLVLPLFGPSNLRDTGGMLFDYTAENQINFLNVAEVSSDHPEITVLRAIDRRYVT
SFRYGQLNSPFEYEKVRYVYTESRKLQIAE

Sequences:

>Translated_270_residues
MAKRLLLLAALLCAGTVQAADADTSNKAQHPATVARQTDADGFTQPLKSLQFNPGLDQREFERASINALEVYDPLESWNR
RVYHFNYRFDEWVFLPVVDGYRYITPGFVRSGVSNFFSNLGDVSNLLNSLLQFKGERSLDTTGRLLLNTTIGIAGLWDPA
TMMGLPRQSEDFGQTLGFYGVPSGPYLVLPLFGPSNLRDTGGMLFDYTAENQINFLNVAEVSSDHPEITVLRAIDRRYVT
SFRYGQLNSPFEYEKVRYVYTESRKLQIAE
>Mature_269_residues
AKRLLLLAALLCAGTVQAADADTSNKAQHPATVARQTDADGFTQPLKSLQFNPGLDQREFERASINALEVYDPLESWNRR
VYHFNYRFDEWVFLPVVDGYRYITPGFVRSGVSNFFSNLGDVSNLLNSLLQFKGERSLDTTGRLLLNTTIGIAGLWDPAT
MMGLPRQSEDFGQTLGFYGVPSGPYLVLPLFGPSNLRDTGGMLFDYTAENQINFLNVAEVSSDHPEITVLRAIDRRYVTS
FRYGQLNSPFEYEKVRYVYTESRKLQIAE

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=138, Percent_Identity=39.1304347826087, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 30436; Mature: 30304

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRLLLLAALLCAGTVQAADADTSNKAQHPATVARQTDADGFTQPLKSLQFNPGLDQRE
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCHHH
FERASINALEVYDPLESWNRRVYHFNYRFDEWVFLPVVDGYRYITPGFVRSGVSNFFSNL
HHHHCCCEEEECCCHHHHCCEEEEEEECCCCEEEEEEECCCEEECCHHHHHHHHHHHHHH
GDVSNLLNSLLQFKGERSLDTTGRLLLNTTIGIAGLWDPATMMGLPRQSEDFGQTLGFYG
HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEECCCCHHHHCCCCCCHHHHHHCCCCC
VPSGPYLVLPLFGPSNLRDTGGMLFDYTAENQINFLNVAEVSSDHPEITVLRAIDRRYVT
CCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEHHHHHHHHH
SFRYGQLNSPFEYEKVRYVYTESRKLQIAE
HCCCCCCCCCCCCCCEEEEEECCCEEEECC
>Mature Secondary Structure 
AKRLLLLAALLCAGTVQAADADTSNKAQHPATVARQTDADGFTQPLKSLQFNPGLDQRE
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCHHH
FERASINALEVYDPLESWNRRVYHFNYRFDEWVFLPVVDGYRYITPGFVRSGVSNFFSNL
HHHHCCCEEEECCCHHHHCCEEEEEEECCCCEEEEEEECCCEEECCHHHHHHHHHHHHHH
GDVSNLLNSLLQFKGERSLDTTGRLLLNTTIGIAGLWDPATMMGLPRQSEDFGQTLGFYG
HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEECCCCHHHHCCCCCCHHHHHHCCCCC
VPSGPYLVLPLFGPSNLRDTGGMLFDYTAENQINFLNVAEVSSDHPEITVLRAIDRRYVT
CCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEHHHHHHHHH
SFRYGQLNSPFEYEKVRYVYTESRKLQIAE
HCCCCCCCCCCCCCCEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA