| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046987
Identifier: 66046987
GI number: 66046987
Start: 4476742
End: 4478040
Strand: Direct
Name: 66046987
Synonym: Psyr_3759
Alternate gene names: NA
Gene position: 4476742-4478040 (Clockwise)
Preceding gene: 66046983
Following gene: 66046988
Centisome position: 73.47
GC content: 57.97
Gene sequence:
>1299_bases ATGCTCCGTTTTCTGCGCCTCGCCACTGTTATAGGTGGCTTGTGTTTAAGTGCGTCCGCTCTGGCAACCAACGTCGACTC CGCCACCTATGGCTACCCGCTGACTAATCCGTTCGAAGCGACCATTGCGACCACACCGCCCGCTCTGCGCCCCGACCTGC CTGACGATGAAGATATCGATCAGGATGTCTACACCCTGAACCTGCATCCCGAGCGCGAGTTCACCCTGCCCGACAACTTC TGGGCGGTGAAGAAGTTGCACTATCGCCTGGCCAAGCAGGACCACGCTGCCCCGCTGATCTTCCTGATCGCCGGCACCGG CGCGCCGTATAACAGCACGATCAATGAATTCCTGAAAAAGCTCTATTACGGCGCGGGCTACCACGTCGTGCAGCTGTCTT CGCCCACCAGCTATGACTTCATGACCTCGGCCTCGCGCTTTGCGACTCCTGGTGTCTCCACCGACGACGCAGAAGACATT TATCGCGTCATGCAGGCCATTCGGGCTCAGCAGGCGCAACTGCCGGTAACCGACTATTACCTGACCGGTTACAGCCTTGG GGCACTGAATGCTGCATTCGTCAGCAAACTGGATGAAACCCGCCGCAGCTTCAACTTCAAGAAAGTCCTGCTGCTCAACC CGCCGGTCAATCTCTACACCTCGATCAGCAACCTCGACAAACTGGTGCAGACCAACGTCAAGGGTATCAACAACACCACC ACGTTCTATGAACTGGTGCTGGCCAAGCTGACCCGCTACTTCCGCCAAAAGGGCTACATCGACCTCAACGATGCACTGCT GTTCGACTTCCAGCAGTCCAAGCAGCACCTGACCAATGAACAGATGGCGATGCTGATCGGTACCTCGTTCCGCTTCTCGT CGGCTGATATCGCGTTCACCTCCGACCTGATCAACCGTCGCGGTCTGATCACGCCACCGAAATTCCCGATCACCGAAGGC ACCAGCCTGACGCCGTTCCTCAAGCGTGCTCTGCAGTGCGACTTCGATTGCTACCTGACCGAACAGGTCATCCCTATGTG GCGCGCGCGCACCGACGGCGGTAGCCTTCTGCAACTGGTCGACCAGGTCAGCCTCTATGCACTCAAGGACTACCTGCACA GCAACACCAAGATTGCCGTCATGCACAACGCTGACGACGTGATCCTGGGCTCGGGTGACCTCGGCTTCCTGCGCAAGACC TTTGGCGATCGCCTGACCGTTTACCCGTACGGCGGGCATTGCGGCAACCTTAATTACCGCGTCAACACCGACGCCATGCT GGAGTTTTTCCGTGGCTAA
Upstream 100 bases:
>100_bases TCATATTTACAGGATTAACCAGTGGATGGGGCACTTTGGCACTACACCTTGGTCATAGCCTGCGTATTTCATCAGCACTT CTTTCCCAAGGGATTTAGTC
Downstream 100 bases:
>100_bases ACGTCTTTTACTTCTTGCCGCTCTGCTCTGTGCCGGCACAGTCCAGGCCGCTGACGCGGATACCAGCAACAAGGCTCAGC ACCCGGCCACGGTGGCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MLRFLRLATVIGGLCLSASALATNVDSATYGYPLTNPFEATIATTPPALRPDLPDDEDIDQDVYTLNLHPEREFTLPDNF WAVKKLHYRLAKQDHAAPLIFLIAGTGAPYNSTINEFLKKLYYGAGYHVVQLSSPTSYDFMTSASRFATPGVSTDDAEDI YRVMQAIRAQQAQLPVTDYYLTGYSLGALNAAFVSKLDETRRSFNFKKVLLLNPPVNLYTSISNLDKLVQTNVKGINNTT TFYELVLAKLTRYFRQKGYIDLNDALLFDFQQSKQHLTNEQMAMLIGTSFRFSSADIAFTSDLINRRGLITPPKFPITEG TSLTPFLKRALQCDFDCYLTEQVIPMWRARTDGGSLLQLVDQVSLYALKDYLHSNTKIAVMHNADDVILGSGDLGFLRKT FGDRLTVYPYGGHCGNLNYRVNTDAMLEFFRG
Sequences:
>Translated_432_residues MLRFLRLATVIGGLCLSASALATNVDSATYGYPLTNPFEATIATTPPALRPDLPDDEDIDQDVYTLNLHPEREFTLPDNF WAVKKLHYRLAKQDHAAPLIFLIAGTGAPYNSTINEFLKKLYYGAGYHVVQLSSPTSYDFMTSASRFATPGVSTDDAEDI YRVMQAIRAQQAQLPVTDYYLTGYSLGALNAAFVSKLDETRRSFNFKKVLLLNPPVNLYTSISNLDKLVQTNVKGINNTT TFYELVLAKLTRYFRQKGYIDLNDALLFDFQQSKQHLTNEQMAMLIGTSFRFSSADIAFTSDLINRRGLITPPKFPITEG TSLTPFLKRALQCDFDCYLTEQVIPMWRARTDGGSLLQLVDQVSLYALKDYLHSNTKIAVMHNADDVILGSGDLGFLRKT FGDRLTVYPYGGHCGNLNYRVNTDAMLEFFRG >Mature_432_residues MLRFLRLATVIGGLCLSASALATNVDSATYGYPLTNPFEATIATTPPALRPDLPDDEDIDQDVYTLNLHPEREFTLPDNF WAVKKLHYRLAKQDHAAPLIFLIAGTGAPYNSTINEFLKKLYYGAGYHVVQLSSPTSYDFMTSASRFATPGVSTDDAEDI YRVMQAIRAQQAQLPVTDYYLTGYSLGALNAAFVSKLDETRRSFNFKKVLLLNPPVNLYTSISNLDKLVQTNVKGINNTT TFYELVLAKLTRYFRQKGYIDLNDALLFDFQQSKQHLTNEQMAMLIGTSFRFSSADIAFTSDLINRRGLITPPKFPITEG TSLTPFLKRALQCDFDCYLTEQVIPMWRARTDGGSLLQLVDQVSLYALKDYLHSNTKIAVMHNADDVILGSGDLGFLRKT FGDRLTVYPYGGHCGNLNYRVNTDAMLEFFRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48471; Mature: 48471
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRFLRLATVIGGLCLSASALATNVDSATYGYPLTNPFEATIATTPPALRPDLPDDEDID CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC QDVYTLNLHPEREFTLPDNFWAVKKLHYRLAKQDHAAPLIFLIAGTGAPYNSTINEFLKK CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHH LYYGAGYHVVQLSSPTSYDFMTSASRFATPGVSTDDAEDIYRVMQAIRAQQAQLPVTDYY HHCCCCEEEEEECCCCCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE LTGYSLGALNAAFVSKLDETRRSFNFKKVLLLNPPVNLYTSISNLDKLVQTNVKGINNTT ECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHH TFYELVLAKLTRYFRQKGYIDLNDALLFDFQQSKQHLTNEQMAMLIGTSFRFSSADIAFT HHHHHHHHHHHHHHHHCCCEEECCCEEEEEHHHHHHHCHHHEEHEEECCCCCCCCCHHHH SDLINRRGLITPPKFPITEGTSLTPFLKRALQCDFDCYLTEQVIPMWRARTDGGSLLQLV HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHHHHH DQVSLYALKDYLHSNTKIAVMHNADDVILGSGDLGFLRKTFGDRLTVYPYGGHCGNLNYR HHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCHHHHHHHHCCEEEEEECCCCCCCCCEE VNTDAMLEFFRG ECHHHHHHHHCC >Mature Secondary Structure MLRFLRLATVIGGLCLSASALATNVDSATYGYPLTNPFEATIATTPPALRPDLPDDEDID CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC QDVYTLNLHPEREFTLPDNFWAVKKLHYRLAKQDHAAPLIFLIAGTGAPYNSTINEFLKK CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHH LYYGAGYHVVQLSSPTSYDFMTSASRFATPGVSTDDAEDIYRVMQAIRAQQAQLPVTDYY HHCCCCEEEEEECCCCCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE LTGYSLGALNAAFVSKLDETRRSFNFKKVLLLNPPVNLYTSISNLDKLVQTNVKGINNTT ECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHH TFYELVLAKLTRYFRQKGYIDLNDALLFDFQQSKQHLTNEQMAMLIGTSFRFSSADIAFT HHHHHHHHHHHHHHHHCCCEEECCCEEEEEHHHHHHHCHHHEEHEEECCCCCCCCCHHHH SDLINRRGLITPPKFPITEGTSLTPFLKRALQCDFDCYLTEQVIPMWRARTDGGSLLQLV HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHHHHH DQVSLYALKDYLHSNTKIAVMHNADDVILGSGDLGFLRKTFGDRLTVYPYGGHCGNLNYR HHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCHHHHHHHHCCEEEEEECCCCCCCCCEE VNTDAMLEFFRG ECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA