| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yfgD [H]
Identifier: 66046931
GI number: 66046931
Start: 4389992
End: 4390345
Strand: Direct
Name: yfgD [H]
Synonym: Psyr_3702
Alternate gene names: 66046931
Gene position: 4389992-4390345 (Clockwise)
Preceding gene: 66046929
Following gene: 66046932
Centisome position: 72.04
GC content: 65.25
Gene sequence:
>354_bases ATGACCGATCTGACGCTGTATCACAACCCGCGCTGCAGCAAGTCCCGCGGCGCGCTGGAACTGCTTCAGGCCCGCGGCCT GACGCCGGACATCGTCCTGTACCTGGAAACCCCGCCCGACGCCGACCGTGTGCGCGACCTGCTCGGCAAGCTGGGCATCG GTGCCCGGCAACTGCTGCGTACCGGCGAGGACGATTACAAGCAACTCAATCTGGCCGACCCGAGCCTGAGCGACGAGCAG CTGATCGCCGCCATGGCCGCTCACCCCAAACTCATCGAACGACCGATTCTGGTCGCTGGCGACAAGGCTGTCATTGGCCG CCCACCCGAGAACATTCTGGAGCTGCTGCCGTGA
Upstream 100 bases:
>100_bases GCAATTACTTATACCCACGCCACGACTATTGACCATTCGATATGTCGGACAGTGCCATCGCTGGTTAGAATACGCCACCC ACACAAGATGCGACGAGCAA
Downstream 100 bases:
>100_bases GCACACCCTACATTCTGGTCCTTTATTACAGCCGCAACGGTTCCACCAGCGAAATGGCCCGGCAGGTTGCCCGCGGCATC GAACTGGGCGGCATGGAAGC
Product: arsenate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTDLTLYHNPRCSKSRGALELLQARGLTPDIVLYLETPPDADRVRDLLGKLGIGARQLLRTGEDDYKQLNLADPSLSDEQ LIAAMAAHPKLIERPILVAGDKAVIGRPPENILELLP
Sequences:
>Translated_117_residues MTDLTLYHNPRCSKSRGALELLQARGLTPDIVLYLETPPDADRVRDLLGKLGIGARQLLRTGEDDYKQLNLADPSLSDEQ LIAAMAAHPKLIERPILVAGDKAVIGRPPENILELLP >Mature_116_residues TDLTLYHNPRCSKSRGALELLQARGLTPDIVLYLETPPDADRVRDLLGKLGIGARQLLRTGEDDYKQLNLADPSLSDEQL IAAMAAHPKLIERPILVAGDKAVIGRPPENILELLP
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788841, Length=114, Percent_Identity=61.4035087719298, Blast_Score=140, Evalue=3e-35, Organism=Escherichia coli, GI1789918, Length=117, Percent_Identity=43.5897435897436, Blast_Score=105, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006659 - InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 12845; Mature: 12714
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLTLYHNPRCSKSRGALELLQARGLTPDIVLYLETPPDADRVRDLLGKLGIGARQLLR CCCCEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHH TGEDDYKQLNLADPSLSDEQLIAAMAAHPKLIERPILVAGDKAVIGRPPENILELLP CCCCHHHEECCCCCCCCHHHHHHHHHHCHHHHHCCEEEECCCEEECCCHHHHHHHCC >Mature Secondary Structure TDLTLYHNPRCSKSRGALELLQARGLTPDIVLYLETPPDADRVRDLLGKLGIGARQLLR CCCEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHH TGEDDYKQLNLADPSLSDEQLIAAMAAHPKLIERPILVAGDKAVIGRPPENILELLP CCCCHHHEECCCCCCCCHHHHHHHHHHCHHHHHCCEEEECCCEEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]